RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
ABCD4-211ENST00000481935 NUP160Q12769 1436 aa19.99■□□□□ 0.79
ABCD4-211ENST00000481935 RAPGEF2Q9Y4G8 1499 aa19.97■□□□□ 0.79
ABCD4-211ENST00000481935 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
ABCD4-211ENST00000481935 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
ABCD4-211ENST00000481935 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
ABCD4-211ENST00000481935 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
ABCD4-211ENST00000481935 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
ABCD4-211ENST00000481935 ERCC6L2Q5T890 1561 aa19.91■□□□□ 0.78
ABCD4-211ENST00000481935 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
ABCD4-211ENST00000481935 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
ABCD4-211ENST00000481935 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
ABCD4-211ENST00000481935 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
ABCD4-211ENST00000481935 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
ABCD4-211ENST00000481935 KIF21BO75037 1637 aa19.86■□□□□ 0.77
ABCD4-211ENST00000481935 KIAA0586Q9BVV6 1533 aa19.84■□□□□ 0.77
ABCD4-211ENST00000481935 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
ABCD4-211ENST00000481935 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
ABCD4-211ENST00000481935 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
ABCD4-211ENST00000481935 IQGAP2Q13576 1575 aa19.8■□□□□ 0.76
ABCD4-211ENST00000481935 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
ABCD4-211ENST00000481935 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
ABCD4-211ENST00000481935 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
ABCD4-211ENST00000481935 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
ABCD4-211ENST00000481935 CEP162Q5TB80 1403 aa19.76■□□□□ 0.75
ABCD4-211ENST00000481935 P3H3Q8IVL6 736 aa19.73■□□□□ 0.75
ABCD4-211ENST00000481935 DISP1Q96F81 1524 aa19.68■□□□□ 0.74
ABCD4-211ENST00000481935 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
ABCD4-211ENST00000481935 UGGT2Q9NYU1 1516 aa19.65■□□□□ 0.74
ABCD4-211ENST00000481935 CARMIL2Q6F5E8 1435 aa19.62■□□□□ 0.73
ABCD4-211ENST00000481935 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
ABCD4-211ENST00000481935 PTPRGP23470 1445 aa19.58■□□□□ 0.73
ABCD4-211ENST00000481935 CLIP1P30622 1438 aa19.57■□□□□ 0.72
ABCD4-211ENST00000481935 FHOD3Q2V2M9 1422 aa19.54■□□□□ 0.72
ABCD4-211ENST00000481935 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
ABCD4-211ENST00000481935 SAMD9Q5K651 1589 aa19.52■□□□□ 0.71
ABCD4-211ENST00000481935 PLB1Q6P1J6 1458 aa19.5■□□□□ 0.71
ABCD4-211ENST00000481935 ADCY10Q96PN6 1610 aa19.5■□□□□ 0.71
ABCD4-211ENST00000481935 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
ABCD4-211ENST00000481935 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
ABCD4-211ENST00000481935 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
ABCD4-211ENST00000481935 TRHP20396 242 aaPredicted RBP19.41■□□□□ 0.7
ABCD4-211ENST00000481935 ATP1B4Q9UN42 357 aaPredicted RBP19.4■□□□□ 0.7
ABCD4-211ENST00000481935 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
ABCD4-211ENST00000481935 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
ABCD4-211ENST00000481935 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
ABCD4-211ENST00000481935 ABCA8O94911 1581 aa19.36■□□□□ 0.69
ABCD4-211ENST00000481935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
ABCD4-211ENST00000481935 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
ABCD4-211ENST00000481935 RAPGEF6Q8TEU7 1601 aa19.32■□□□□ 0.68
ABCD4-211ENST00000481935 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
ABCD4-211ENST00000481935 UHRF1BP1LA0JNW5 1464 aa19.31■□□□□ 0.68
ABCD4-211ENST00000481935 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
ABCD4-211ENST00000481935 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
ABCD4-211ENST00000481935 ASXL2Q76L83 1435 aa19.26■□□□□ 0.67
ABCD4-211ENST00000481935 ATP10BO94823 1461 aa19.26■□□□□ 0.67
ABCD4-211ENST00000481935 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
ABCD4-211ENST00000481935 CDK13Q14004 1512 aaKnown RBP19.25■□□□□ 0.67
ABCD4-211ENST00000481935 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
ABCD4-211ENST00000481935 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
ABCD4-211ENST00000481935 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
ABCD4-211ENST00000481935 MAPKBP1O60336 1514 aa19.23■□□□□ 0.67
ABCD4-211ENST00000481935 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
ABCD4-211ENST00000481935 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
ABCD4-211ENST00000481935 TSPOAP1O95153 1857 aa19.17■□□□□ 0.66
ABCD4-211ENST00000481935 DIP2BQ9P265 1576 aa19.17■□□□□ 0.66
ABCD4-211ENST00000481935 EPRSP07814 1512 aaKnown RBP19.16■□□□□ 0.66
ABCD4-211ENST00000481935 HECW1Q76N89 1606 aa19.16■□□□□ 0.66
ABCD4-211ENST00000481935 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
ABCD4-211ENST00000481935 WDR7Q9Y4E6 1490 aa19.16■□□□□ 0.66
ABCD4-211ENST00000481935 APLP2Q06481 763 aa19.15■□□□□ 0.66
ABCD4-211ENST00000481935 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
ABCD4-211ENST00000481935 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
ABCD4-211ENST00000481935 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
ABCD4-211ENST00000481935 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
ABCD4-211ENST00000481935 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
ABCD4-211ENST00000481935 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
ABCD4-211ENST00000481935 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
ABCD4-211ENST00000481935 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
ABCD4-211ENST00000481935 KIF14Q15058 1648 aa19.02■□□□□ 0.64
ABCD4-211ENST00000481935 MYT1Q01538 1121 aa19.01■□□□□ 0.63
ABCD4-211ENST00000481935 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
ABCD4-211ENST00000481935 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
ABCD4-211ENST00000481935 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
ABCD4-211ENST00000481935 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
ABCD4-211ENST00000481935 GLI2P10070 1586 aa18.99■□□□□ 0.63
ABCD4-211ENST00000481935 TTC37Q6PGP7 1564 aa18.99■□□□□ 0.63
ABCD4-211ENST00000481935 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
ABCD4-211ENST00000481935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.97■□□□□ 0.63
ABCD4-211ENST00000481935 TROQ12816 1431 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-211ENST00000481935 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
ABCD4-211ENST00000481935 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
ABCD4-211ENST00000481935 MTUS2Q5JR59 1369 aa18.96■□□□□ 0.63
ABCD4-211ENST00000481935 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
ABCD4-211ENST00000481935 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
ABCD4-211ENST00000481935 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
ABCD4-211ENST00000481935 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
ABCD4-211ENST00000481935 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
ABCD4-211ENST00000481935 MYO5CQ9NQX4 1742 aa18.84■□□□□ 0.61
ABCD4-211ENST00000481935 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms