RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
HPS4-212ENST00000481910 NUP160Q12769 1436 aa18.82■□□□□ 0.6
HPS4-212ENST00000481910 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
HPS4-212ENST00000481910 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
HPS4-212ENST00000481910 KIAA0586Q9BVV6 1533 aa18.76■□□□□ 0.59
HPS4-212ENST00000481910 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
HPS4-212ENST00000481910 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
HPS4-212ENST00000481910 IQGAP2Q13576 1575 aa18.71■□□□□ 0.59
HPS4-212ENST00000481910 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
HPS4-212ENST00000481910 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
HPS4-212ENST00000481910 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
HPS4-212ENST00000481910 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
HPS4-212ENST00000481910 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
HPS4-212ENST00000481910 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
HPS4-212ENST00000481910 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
HPS4-212ENST00000481910 CARMIL2Q6F5E8 1435 aa18.56■□□□□ 0.56
HPS4-212ENST00000481910 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
HPS4-212ENST00000481910 DISP1Q96F81 1524 aa18.55■□□□□ 0.56
HPS4-212ENST00000481910 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
HPS4-212ENST00000481910 CLIP1P30622 1438 aa18.54■□□□□ 0.56
HPS4-212ENST00000481910 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
HPS4-212ENST00000481910 KIAA0556O60303 1618 aa18.52■□□□□ 0.55
HPS4-212ENST00000481910 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
HPS4-212ENST00000481910 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
HPS4-212ENST00000481910 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
HPS4-212ENST00000481910 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
HPS4-212ENST00000481910 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
HPS4-212ENST00000481910 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
HPS4-212ENST00000481910 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
HPS4-212ENST00000481910 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
HPS4-212ENST00000481910 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
HPS4-212ENST00000481910 PTPRGP23470 1445 aa18.44■□□□□ 0.54
HPS4-212ENST00000481910 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
HPS4-212ENST00000481910 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
HPS4-212ENST00000481910 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
HPS4-212ENST00000481910 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
HPS4-212ENST00000481910 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
HPS4-212ENST00000481910 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
HPS4-212ENST00000481910 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
HPS4-212ENST00000481910 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
HPS4-212ENST00000481910 ABCA8O94911 1581 aa18.28■□□□□ 0.52
HPS4-212ENST00000481910 RAPGEF6Q8TEU7 1601 aa18.28■□□□□ 0.52
HPS4-212ENST00000481910 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
HPS4-212ENST00000481910 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
HPS4-212ENST00000481910 UHRF1BP1LA0JNW5 1464 aa18.24■□□□□ 0.51
HPS4-212ENST00000481910 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
HPS4-212ENST00000481910 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
HPS4-212ENST00000481910 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
HPS4-212ENST00000481910 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
HPS4-212ENST00000481910 HECW1Q76N89 1606 aa18.21■□□□□ 0.51
HPS4-212ENST00000481910 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
HPS4-212ENST00000481910 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.51
HPS4-212ENST00000481910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
HPS4-212ENST00000481910 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
HPS4-212ENST00000481910 KDM5BQ9UGL1 1544 aa18.17■□□□□ 0.5
HPS4-212ENST00000481910 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
HPS4-212ENST00000481910 ATP10BO94823 1461 aa18.16■□□□□ 0.5
HPS4-212ENST00000481910 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
HPS4-212ENST00000481910 APLP2Q06481 763 aa18.15■□□□□ 0.5
HPS4-212ENST00000481910 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
HPS4-212ENST00000481910 CDK13Q14004 1512 aaKnown RBP18.14■□□□□ 0.49
HPS4-212ENST00000481910 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
HPS4-212ENST00000481910 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
HPS4-212ENST00000481910 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
HPS4-212ENST00000481910 PLEKHD1A6NEE1 506 aa18.1■□□□□ 0.49
HPS4-212ENST00000481910 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
HPS4-212ENST00000481910 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
HPS4-212ENST00000481910 MAP3K1Q13233 1512 aa18.05■□□□□ 0.48
HPS4-212ENST00000481910 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
HPS4-212ENST00000481910 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
HPS4-212ENST00000481910 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
HPS4-212ENST00000481910 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
HPS4-212ENST00000481910 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
HPS4-212ENST00000481910 WDR7Q9Y4E6 1490 aa18.02■□□□□ 0.47
HPS4-212ENST00000481910 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
HPS4-212ENST00000481910 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
HPS4-212ENST00000481910 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
HPS4-212ENST00000481910 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
HPS4-212ENST00000481910 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
HPS4-212ENST00000481910 FAM69CQ0P6D2 419 aa17.92■□□□□ 0.46
HPS4-212ENST00000481910 ABCC10Q5T3U5 1492 aa17.92■□□□□ 0.46
HPS4-212ENST00000481910 KIF14Q15058 1648 aa17.92■□□□□ 0.46
HPS4-212ENST00000481910 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
HPS4-212ENST00000481910 SUPT6HQ7KZ85 1726 aaKnown RBP17.9■□□□□ 0.46
HPS4-212ENST00000481910 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
HPS4-212ENST00000481910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
HPS4-212ENST00000481910 NCOA2Q15596 1464 aa17.87■□□□□ 0.45
HPS4-212ENST00000481910 GLI2P10070 1586 aa17.86■□□□□ 0.45
HPS4-212ENST00000481910 KIF13AQ9H1H9 1805 aa17.86■□□□□ 0.45
HPS4-212ENST00000481910 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
HPS4-212ENST00000481910 TTC37Q6PGP7 1564 aa17.85■□□□□ 0.45
HPS4-212ENST00000481910 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
HPS4-212ENST00000481910 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
HPS4-212ENST00000481910 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
HPS4-212ENST00000481910 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
HPS4-212ENST00000481910 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
HPS4-212ENST00000481910 MYO5CQ9NQX4 1742 aa17.8■□□□□ 0.44
HPS4-212ENST00000481910 PLCH2O75038 1416 aa17.79■□□□□ 0.44
HPS4-212ENST00000481910 TSPOAP1O95153 1857 aa17.79■□□□□ 0.44
HPS4-212ENST00000481910 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms