RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
MECP2-208ENST00000481807 CUX1P39880 1505 aa13.01□□□□□ -0.33
MECP2-208ENST00000481807 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
MECP2-208ENST00000481807 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
MECP2-208ENST00000481807 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
MECP2-208ENST00000481807 NUP160Q12769 1436 aa12.96□□□□□ -0.33
MECP2-208ENST00000481807 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
MECP2-208ENST00000481807 ABCC10Q5T3U5 1492 aa12.96□□□□□ -0.34
MECP2-208ENST00000481807 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
MECP2-208ENST00000481807 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
MECP2-208ENST00000481807 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
MECP2-208ENST00000481807 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
MECP2-208ENST00000481807 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
MECP2-208ENST00000481807 MAPKBP1O60336 1514 aa12.92□□□□□ -0.34
MECP2-208ENST00000481807 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
MECP2-208ENST00000481807 RUSC2Q8N2Y8 1516 aa12.89□□□□□ -0.35
MECP2-208ENST00000481807 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
MECP2-208ENST00000481807 KDM6BO15054 1643 aa12.88□□□□□ -0.35
MECP2-208ENST00000481807 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
MECP2-208ENST00000481807 DIP2BQ9P265 1576 aa12.88□□□□□ -0.35
MECP2-208ENST00000481807 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
MECP2-208ENST00000481807 KIF21BO75037 1637 aa12.85□□□□□ -0.35
MECP2-208ENST00000481807 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
MECP2-208ENST00000481807 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
MECP2-208ENST00000481807 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
MECP2-208ENST00000481807 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
MECP2-208ENST00000481807 TNIKQ9UKE5 1360 aa12.79□□□□□ -0.36
MECP2-208ENST00000481807 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
MECP2-208ENST00000481807 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
MECP2-208ENST00000481807 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
MECP2-208ENST00000481807 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
MECP2-208ENST00000481807 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
MECP2-208ENST00000481807 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
MECP2-208ENST00000481807 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
MECP2-208ENST00000481807 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
MECP2-208ENST00000481807 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
MECP2-208ENST00000481807 RAPGEF2Q9Y4G8 1499 aa12.72□□□□□ -0.37
MECP2-208ENST00000481807 IGF1RP08069 1367 aa12.71□□□□□ -0.37
MECP2-208ENST00000481807 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
MECP2-208ENST00000481807 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
MECP2-208ENST00000481807 GLI2P10070 1586 aa12.68□□□□□ -0.38
MECP2-208ENST00000481807 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
MECP2-208ENST00000481807 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
MECP2-208ENST00000481807 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
MECP2-208ENST00000481807 CUL7Q14999 1698 aa12.64□□□□□ -0.39
MECP2-208ENST00000481807 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
MECP2-208ENST00000481807 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
MECP2-208ENST00000481807 PLB1Q6P1J6 1458 aa12.61□□□□□ -0.39
MECP2-208ENST00000481807 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
MECP2-208ENST00000481807 CLIP1P30622 1438 aa12.6□□□□□ -0.39
MECP2-208ENST00000481807 ABCC2Q92887 1545 aa12.59□□□□□ -0.39
MECP2-208ENST00000481807 KIAA0586Q9BVV6 1533 aa12.59□□□□□ -0.39
MECP2-208ENST00000481807 ASXL2Q76L83 1435 aa12.57□□□□□ -0.4
MECP2-208ENST00000481807 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
MECP2-208ENST00000481807 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
MECP2-208ENST00000481807 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
MECP2-208ENST00000481807 PTPRGP23470 1445 aa12.54□□□□□ -0.4
MECP2-208ENST00000481807 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
MECP2-208ENST00000481807 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
MECP2-208ENST00000481807 VPS8Q8N3P4 1428 aa12.51□□□□□ -0.41
MECP2-208ENST00000481807 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
MECP2-208ENST00000481807 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
MECP2-208ENST00000481807 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
MECP2-208ENST00000481807 SOCS7O14512 581 aa12.47□□□□□ -0.41
MECP2-208ENST00000481807 CTTNBP2Q8WZ74 1663 aa12.47□□□□□ -0.41
MECP2-208ENST00000481807 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.41
MECP2-208ENST00000481807 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
MECP2-208ENST00000481807 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
MECP2-208ENST00000481807 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
MECP2-208ENST00000481807 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
MECP2-208ENST00000481807 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
MECP2-208ENST00000481807 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
MECP2-208ENST00000481807 PTPRMP28827 1452 aa12.4□□□□□ -0.43
MECP2-208ENST00000481807 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
MECP2-208ENST00000481807 ADAMTSL3P82987 1691 aa12.38□□□□□ -0.43
MECP2-208ENST00000481807 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
MECP2-208ENST00000481807 ILDR2Q71H61 639 aa12.37□□□□□ -0.43
MECP2-208ENST00000481807 PCGF6Q9BYE7 350 aa12.37□□□□□ -0.43
MECP2-208ENST00000481807 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
MECP2-208ENST00000481807 WDR7Q9Y4E6 1490 aa12.37□□□□□ -0.43
MECP2-208ENST00000481807 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
MECP2-208ENST00000481807 IQGAP2Q13576 1575 aa12.36□□□□□ -0.43
MECP2-208ENST00000481807 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
MECP2-208ENST00000481807 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
MECP2-208ENST00000481807 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
MECP2-208ENST00000481807 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
MECP2-208ENST00000481807 ARAP3Q8WWN8 1544 aa12.34□□□□□ -0.43
MECP2-208ENST00000481807 UGGT2Q9NYU1 1516 aa12.33□□□□□ -0.44
MECP2-208ENST00000481807 CD109Q6YHK3 1445 aa12.33□□□□□ -0.44
MECP2-208ENST00000481807 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
MECP2-208ENST00000481807 APLP2Q06481 763 aa12.32□□□□□ -0.44
MECP2-208ENST00000481807 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
MECP2-208ENST00000481807 FHOD3Q2V2M9 1422 aa12.3□□□□□ -0.44
MECP2-208ENST00000481807 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
MECP2-208ENST00000481807 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
MECP2-208ENST00000481807 CASKIN1Q8WXD9 1431 aa12.29□□□□□ -0.44
MECP2-208ENST00000481807 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
MECP2-208ENST00000481807 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
MECP2-208ENST00000481807 BCORL1Q5H9F3 1711 aa12.27□□□□□ -0.45
MECP2-208ENST00000481807 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms