RNA–Protein interactions for RNA: ENST00000481631.1

DHFR2-204, Transcript of dihydrofolate reductase 2, humanhuman

TSL 3

Gene DHFR2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-204ENST00000481631 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
DHFR2-204ENST00000481631 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.34
DHFR2-204ENST00000481631 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
DHFR2-204ENST00000481631 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
DHFR2-204ENST00000481631 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
DHFR2-204ENST00000481631 FBXO41Q8TF61 875 aa17.13■□□□□ 0.33
DHFR2-204ENST00000481631 WIZO95785 1651 aa17.1■□□□□ 0.33
DHFR2-204ENST00000481631 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
DHFR2-204ENST00000481631 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
DHFR2-204ENST00000481631 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
DHFR2-204ENST00000481631 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
DHFR2-204ENST00000481631 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
DHFR2-204ENST00000481631 ABCB7O75027 752 aa17.01■□□□□ 0.31
DHFR2-204ENST00000481631 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
DHFR2-204ENST00000481631 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
DHFR2-204ENST00000481631 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
DHFR2-204ENST00000481631 KDM6BO15054 1643 aa16.98■□□□□ 0.31
DHFR2-204ENST00000481631 SOCS7O14512 581 aa16.96■□□□□ 0.31
DHFR2-204ENST00000481631 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
DHFR2-204ENST00000481631 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
DHFR2-204ENST00000481631 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
DHFR2-204ENST00000481631 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
DHFR2-204ENST00000481631 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
DHFR2-204ENST00000481631 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
DHFR2-204ENST00000481631 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
DHFR2-204ENST00000481631 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
DHFR2-204ENST00000481631 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
DHFR2-204ENST00000481631 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
DHFR2-204ENST00000481631 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
DHFR2-204ENST00000481631 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
DHFR2-204ENST00000481631 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
DHFR2-204ENST00000481631 SOGA1O94964 1423 aa16.76■□□□□ 0.27
DHFR2-204ENST00000481631 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
DHFR2-204ENST00000481631 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
DHFR2-204ENST00000481631 ZBTB22O15209 634 aa16.73■□□□□ 0.27
DHFR2-204ENST00000481631 POLA2Q14181 598 aa16.73■□□□□ 0.27
DHFR2-204ENST00000481631 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
DHFR2-204ENST00000481631 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
DHFR2-204ENST00000481631 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
DHFR2-204ENST00000481631 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
DHFR2-204ENST00000481631 SHROOM2Q13796 1616 aa16.64■□□□□ 0.25
DHFR2-204ENST00000481631 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
DHFR2-204ENST00000481631 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
DHFR2-204ENST00000481631 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
DHFR2-204ENST00000481631 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
DHFR2-204ENST00000481631 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
DHFR2-204ENST00000481631 NUP160Q12769 1436 aa16.54■□□□□ 0.24
DHFR2-204ENST00000481631 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
DHFR2-204ENST00000481631 SPATA31D1Q6ZQQ2 1576 aa16.52■□□□□ 0.24
DHFR2-204ENST00000481631 ADCY10Q96PN6 1610 aa16.5■□□□□ 0.23
DHFR2-204ENST00000481631 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
DHFR2-204ENST00000481631 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
DHFR2-204ENST00000481631 POTEHQ6S545 545 aa16.48■□□□□ 0.23
DHFR2-204ENST00000481631 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
DHFR2-204ENST00000481631 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
DHFR2-204ENST00000481631 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
DHFR2-204ENST00000481631 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
DHFR2-204ENST00000481631 COL17A1Q9UMD9 1497 aaPredicted RBP16.4■□□□□ 0.22
DHFR2-204ENST00000481631 CUX1P39880 1505 aa16.39■□□□□ 0.21
DHFR2-204ENST00000481631 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
DHFR2-204ENST00000481631 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
DHFR2-204ENST00000481631 GLI2P10070 1586 aa16.34■□□□□ 0.21
DHFR2-204ENST00000481631 JPH4Q96JJ6 628 aa16.32■□□□□ 0.2
DHFR2-204ENST00000481631 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
DHFR2-204ENST00000481631 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
DHFR2-204ENST00000481631 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
DHFR2-204ENST00000481631 KIF21BO75037 1637 aa16.23■□□□□ 0.19
DHFR2-204ENST00000481631 PTPRMP28827 1452 aa16.23■□□□□ 0.19
DHFR2-204ENST00000481631 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
DHFR2-204ENST00000481631 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
DHFR2-204ENST00000481631 PLB1Q6P1J6 1458 aa16.22■□□□□ 0.19
DHFR2-204ENST00000481631 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
DHFR2-204ENST00000481631 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
DHFR2-204ENST00000481631 ABCC2Q92887 1545 aa16.16■□□□□ 0.18
DHFR2-204ENST00000481631 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
DHFR2-204ENST00000481631 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.18
DHFR2-204ENST00000481631 CUL7Q14999 1698 aa16.12■□□□□ 0.17
DHFR2-204ENST00000481631 EPRSP07814 1512 aaKnown RBP16.12■□□□□ 0.17
DHFR2-204ENST00000481631 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
DHFR2-204ENST00000481631 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
DHFR2-204ENST00000481631 HSPA2P54652 639 aa16.08■□□□□ 0.16
DHFR2-204ENST00000481631 PTPRGP23470 1445 aa16.05■□□□□ 0.16
DHFR2-204ENST00000481631 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
DHFR2-204ENST00000481631 MADDQ8WXG6 1647 aa16.03■□□□□ 0.16
DHFR2-204ENST00000481631 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.16
DHFR2-204ENST00000481631 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
DHFR2-204ENST00000481631 BCORL1Q5H9F3 1711 aa15.99■□□□□ 0.15
DHFR2-204ENST00000481631 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
DHFR2-204ENST00000481631 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
DHFR2-204ENST00000481631 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
DHFR2-204ENST00000481631 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
DHFR2-204ENST00000481631 SPDYE2BA6NHP3 402 aa15.94■□□□□ 0.14
DHFR2-204ENST00000481631 SPDYE6P0CI01 402 aa15.94■□□□□ 0.14
DHFR2-204ENST00000481631 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
DHFR2-204ENST00000481631 SPDYE2Q495Y8 402 aa15.94■□□□□ 0.14
DHFR2-204ENST00000481631 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
DHFR2-204ENST00000481631 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
DHFR2-204ENST00000481631 ZCCHC11Q5TAX3 1644 aaKnown RBP15.91■□□□□ 0.14
DHFR2-204ENST00000481631 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
DHFR2-204ENST00000481631 UACAQ9BZF9 1416 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms