RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 CUL7Q14999 1698 aa20.9■□□□□ 0.94
PHF3-204ENST00000481385 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.93
PHF3-204ENST00000481385 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
PHF3-204ENST00000481385 ITGAEP38570 1179 aa20.88■□□□□ 0.93
PHF3-204ENST00000481385 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
PHF3-204ENST00000481385 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
PHF3-204ENST00000481385 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
PHF3-204ENST00000481385 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
PHF3-204ENST00000481385 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
PHF3-204ENST00000481385 ABCA5Q8WWZ7 1642 aa20.85■□□□□ 0.93
PHF3-204ENST00000481385 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
PHF3-204ENST00000481385 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.92
PHF3-204ENST00000481385 ATP1B4Q9UN42 357 aaPredicted RBP20.81■□□□□ 0.92
PHF3-204ENST00000481385 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
PHF3-204ENST00000481385 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
PHF3-204ENST00000481385 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
PHF3-204ENST00000481385 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
PHF3-204ENST00000481385 NEUROD1Q13562 356 aa20.76■□□□□ 0.91
PHF3-204ENST00000481385 CASKIN1Q8WXD9 1431 aa20.76■□□□□ 0.91
PHF3-204ENST00000481385 RAB3GAP2Q9H2M9 1393 aa20.74■□□□□ 0.91
PHF3-204ENST00000481385 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
PHF3-204ENST00000481385 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
PHF3-204ENST00000481385 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
PHF3-204ENST00000481385 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
PHF3-204ENST00000481385 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
PHF3-204ENST00000481385 SAMD9Q5K651 1589 aa20.69■□□□□ 0.9
PHF3-204ENST00000481385 MIER1Q8N108 512 aa20.68■□□□□ 0.9
PHF3-204ENST00000481385 FMN1Q68DA7 1419 aa20.67■□□□□ 0.9
PHF3-204ENST00000481385 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
PHF3-204ENST00000481385 SETD5Q9C0A6 1442 aa20.64■□□□□ 0.89
PHF3-204ENST00000481385 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.89
PHF3-204ENST00000481385 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
PHF3-204ENST00000481385 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
PHF3-204ENST00000481385 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.88
PHF3-204ENST00000481385 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
PHF3-204ENST00000481385 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
PHF3-204ENST00000481385 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
PHF3-204ENST00000481385 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
PHF3-204ENST00000481385 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
PHF3-204ENST00000481385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.51■□□□□ 0.87
PHF3-204ENST00000481385 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
PHF3-204ENST00000481385 MAGI3Q5TCQ9 1506 aa20.49■□□□□ 0.87
PHF3-204ENST00000481385 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
PHF3-204ENST00000481385 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
PHF3-204ENST00000481385 SIN3AQ96ST3 1273 aa20.49■□□□□ 0.87
PHF3-204ENST00000481385 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
PHF3-204ENST00000481385 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
PHF3-204ENST00000481385 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
PHF3-204ENST00000481385 WDR62O43379 1518 aa20.43■□□□□ 0.86
PHF3-204ENST00000481385 MYOM3Q5VTT5 1437 aa20.43■□□□□ 0.86
PHF3-204ENST00000481385 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
PHF3-204ENST00000481385 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
PHF3-204ENST00000481385 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
PHF3-204ENST00000481385 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
PHF3-204ENST00000481385 UGGT2Q9NYU1 1516 aa20.4■□□□□ 0.86
PHF3-204ENST00000481385 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
PHF3-204ENST00000481385 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
PHF3-204ENST00000481385 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
PHF3-204ENST00000481385 HFM1A2PYH4 1435 aa20.37■□□□□ 0.85
PHF3-204ENST00000481385 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
PHF3-204ENST00000481385 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
PHF3-204ENST00000481385 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
PHF3-204ENST00000481385 NAIPQ13075 1403 aa20.33■□□□□ 0.85
PHF3-204ENST00000481385 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.85
PHF3-204ENST00000481385 DISP1Q96F81 1524 aa20.31■□□□□ 0.84
PHF3-204ENST00000481385 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
PHF3-204ENST00000481385 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
PHF3-204ENST00000481385 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
PHF3-204ENST00000481385 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
PHF3-204ENST00000481385 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
PHF3-204ENST00000481385 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.83
PHF3-204ENST00000481385 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
PHF3-204ENST00000481385 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
PHF3-204ENST00000481385 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
PHF3-204ENST00000481385 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
PHF3-204ENST00000481385 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
PHF3-204ENST00000481385 HIRIP3Q9BW71 556 aaPredicted RBP20.2■□□□□ 0.82
PHF3-204ENST00000481385 KDM6BO15054 1643 aa20.2■□□□□ 0.82
PHF3-204ENST00000481385 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
PHF3-204ENST00000481385 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
PHF3-204ENST00000481385 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
PHF3-204ENST00000481385 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
PHF3-204ENST00000481385 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
PHF3-204ENST00000481385 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
PHF3-204ENST00000481385 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
PHF3-204ENST00000481385 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
PHF3-204ENST00000481385 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.82
PHF3-204ENST00000481385 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
PHF3-204ENST00000481385 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
PHF3-204ENST00000481385 KDM5BQ9UGL1 1544 aa20.13■□□□□ 0.81
PHF3-204ENST00000481385 FBLN2P98095 1184 aa20.12■□□□□ 0.81
PHF3-204ENST00000481385 ZNF644Q9H582 1327 aaPredicted RBP20.12■□□□□ 0.81
PHF3-204ENST00000481385 PLB1Q6P1J6 1458 aa20.1■□□□□ 0.81
PHF3-204ENST00000481385 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
PHF3-204ENST00000481385 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.81
PHF3-204ENST00000481385 DAPK1P53355 1430 aa20.07■□□□□ 0.8
PHF3-204ENST00000481385 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
PHF3-204ENST00000481385 ABCC5O15440 1437 aa20.06■□□□□ 0.8
PHF3-204ENST00000481385 NUP160Q12769 1436 aa20.05■□□□□ 0.8
PHF3-204ENST00000481385 DNMT1P26358 1616 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms