RNA–Protein interactions for RNA: ENST00000481356.1

SRPRB-203, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 1,487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-203ENST00000481356 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
SRPRB-203ENST00000481356 SHROOM2Q13796 1616 aa18.9■□□□□ 0.62
SRPRB-203ENST00000481356 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
SRPRB-203ENST00000481356 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
SRPRB-203ENST00000481356 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
SRPRB-203ENST00000481356 JPH4Q96JJ6 628 aa18.77■□□□□ 0.59
SRPRB-203ENST00000481356 KIAA0586Q9BVV6 1533 aa18.75■□□□□ 0.59
SRPRB-203ENST00000481356 RAPGEF2Q9Y4G8 1499 aa18.74■□□□□ 0.59
SRPRB-203ENST00000481356 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
SRPRB-203ENST00000481356 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
SRPRB-203ENST00000481356 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
SRPRB-203ENST00000481356 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
SRPRB-203ENST00000481356 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
SRPRB-203ENST00000481356 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
SRPRB-203ENST00000481356 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.57
SRPRB-203ENST00000481356 ADCY10Q96PN6 1610 aa18.58■□□□□ 0.57
SRPRB-203ENST00000481356 DISP1Q96F81 1524 aa18.57■□□□□ 0.56
SRPRB-203ENST00000481356 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
SRPRB-203ENST00000481356 KIAA0556O60303 1618 aa18.55■□□□□ 0.56
SRPRB-203ENST00000481356 EEA1Q15075 1411 aa18.54■□□□□ 0.56
SRPRB-203ENST00000481356 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
SRPRB-203ENST00000481356 PTPRGP23470 1445 aa18.51■□□□□ 0.55
SRPRB-203ENST00000481356 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
SRPRB-203ENST00000481356 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
SRPRB-203ENST00000481356 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
SRPRB-203ENST00000481356 KIF21BO75037 1637 aa18.47■□□□□ 0.55
SRPRB-203ENST00000481356 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
SRPRB-203ENST00000481356 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
SRPRB-203ENST00000481356 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
SRPRB-203ENST00000481356 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
SRPRB-203ENST00000481356 ABCC2Q92887 1545 aa18.39■□□□□ 0.53
SRPRB-203ENST00000481356 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
SRPRB-203ENST00000481356 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
SRPRB-203ENST00000481356 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
SRPRB-203ENST00000481356 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
SRPRB-203ENST00000481356 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
SRPRB-203ENST00000481356 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
SRPRB-203ENST00000481356 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
SRPRB-203ENST00000481356 TSPOAP1O95153 1857 aa18.34■□□□□ 0.53
SRPRB-203ENST00000481356 ABCA8O94911 1581 aa18.33■□□□□ 0.53
SRPRB-203ENST00000481356 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
SRPRB-203ENST00000481356 FAM69CQ0P6D2 419 aa18.3■□□□□ 0.52
SRPRB-203ENST00000481356 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
SRPRB-203ENST00000481356 ASXL2Q76L83 1435 aa18.29■□□□□ 0.52
SRPRB-203ENST00000481356 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
SRPRB-203ENST00000481356 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
SRPRB-203ENST00000481356 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
SRPRB-203ENST00000481356 RAPGEF6Q8TEU7 1601 aa18.25■□□□□ 0.51
SRPRB-203ENST00000481356 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
SRPRB-203ENST00000481356 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
SRPRB-203ENST00000481356 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
SRPRB-203ENST00000481356 GLI2P10070 1586 aa18.17■□□□□ 0.5
SRPRB-203ENST00000481356 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
SRPRB-203ENST00000481356 WDR7Q9Y4E6 1490 aa18.16■□□□□ 0.5
SRPRB-203ENST00000481356 ATP10BO94823 1461 aa18.16■□□□□ 0.5
SRPRB-203ENST00000481356 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
SRPRB-203ENST00000481356 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
SRPRB-203ENST00000481356 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
SRPRB-203ENST00000481356 KDM6BO15054 1643 aa18.1■□□□□ 0.49
SRPRB-203ENST00000481356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
SRPRB-203ENST00000481356 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
SRPRB-203ENST00000481356 CFAP43Q8NDM7 1665 aa18.08■□□□□ 0.49
SRPRB-203ENST00000481356 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.49
SRPRB-203ENST00000481356 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
SRPRB-203ENST00000481356 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
SRPRB-203ENST00000481356 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
SRPRB-203ENST00000481356 FMN1Q68DA7 1419 aa18.02■□□□□ 0.48
SRPRB-203ENST00000481356 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
SRPRB-203ENST00000481356 ABCA9Q8IUA7 1624 aa18.01■□□□□ 0.47
SRPRB-203ENST00000481356 CD109Q6YHK3 1445 aa18.01■□□□□ 0.47
SRPRB-203ENST00000481356 CLIP1P30622 1438 aa18■□□□□ 0.47
SRPRB-203ENST00000481356 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
SRPRB-203ENST00000481356 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
SRPRB-203ENST00000481356 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
SRPRB-203ENST00000481356 MAGI3Q5TCQ9 1506 aa17.95■□□□□ 0.46
SRPRB-203ENST00000481356 TTC37Q6PGP7 1564 aa17.94■□□□□ 0.46
SRPRB-203ENST00000481356 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
SRPRB-203ENST00000481356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.46
SRPRB-203ENST00000481356 CEP162Q5TB80 1403 aa17.91■□□□□ 0.46
SRPRB-203ENST00000481356 KIF14Q15058 1648 aa17.91■□□□□ 0.46
SRPRB-203ENST00000481356 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
SRPRB-203ENST00000481356 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
SRPRB-203ENST00000481356 FOXD1Q16676 465 aa17.86■□□□□ 0.45
SRPRB-203ENST00000481356 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
SRPRB-203ENST00000481356 CCDC18Q5T9S5 1454 aa17.84■□□□□ 0.45
SRPRB-203ENST00000481356 TROQ12816 1431 aaPredicted RBP17.82■□□□□ 0.44
SRPRB-203ENST00000481356 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
SRPRB-203ENST00000481356 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
SRPRB-203ENST00000481356 CFAP74Q9C0B2 1584 aa17.79■□□□□ 0.44
SRPRB-203ENST00000481356 NEO1Q92859 1461 aa17.79■□□□□ 0.44
SRPRB-203ENST00000481356 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
SRPRB-203ENST00000481356 FANCAO15360 1455 aa17.78■□□□□ 0.44
SRPRB-203ENST00000481356 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.44
SRPRB-203ENST00000481356 RICTORQ6R327 1708 aa17.77■□□□□ 0.43
SRPRB-203ENST00000481356 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
SRPRB-203ENST00000481356 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
SRPRB-203ENST00000481356 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
SRPRB-203ENST00000481356 PLCH2O75038 1416 aa17.73■□□□□ 0.43
SRPRB-203ENST00000481356 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
SRPRB-203ENST00000481356 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms