RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
SHROOM3-205ENST00000481002 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
SHROOM3-205ENST00000481002 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SHROOM3-205ENST00000481002 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
SHROOM3-205ENST00000481002 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
SHROOM3-205ENST00000481002 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
SHROOM3-205ENST00000481002 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
SHROOM3-205ENST00000481002 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
SHROOM3-205ENST00000481002 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
SHROOM3-205ENST00000481002 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
SHROOM3-205ENST00000481002 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
SHROOM3-205ENST00000481002 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
SHROOM3-205ENST00000481002 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
SHROOM3-205ENST00000481002 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
SHROOM3-205ENST00000481002 DISP1Q96F81 1524 aa20.14■□□□□ 0.81
SHROOM3-205ENST00000481002 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
SHROOM3-205ENST00000481002 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
SHROOM3-205ENST00000481002 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
SHROOM3-205ENST00000481002 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
SHROOM3-205ENST00000481002 ARAP1Q96P48 1450 aa20.09■□□□□ 0.81
SHROOM3-205ENST00000481002 SAMD9Q5K651 1589 aa20.08■□□□□ 0.8
SHROOM3-205ENST00000481002 EFCAB5A4FU69 1503 aa20.03■□□□□ 0.8
SHROOM3-205ENST00000481002 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
SHROOM3-205ENST00000481002 CYB5RLQ6IPT4 315 aa20.02■□□□□ 0.8
SHROOM3-205ENST00000481002 PTPRGP23470 1445 aa20.01■□□□□ 0.79
SHROOM3-205ENST00000481002 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
SHROOM3-205ENST00000481002 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
SHROOM3-205ENST00000481002 CLIP1P30622 1438 aa19.95■□□□□ 0.78
SHROOM3-205ENST00000481002 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
SHROOM3-205ENST00000481002 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
SHROOM3-205ENST00000481002 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
SHROOM3-205ENST00000481002 UACAQ9BZF9 1416 aa19.89■□□□□ 0.77
SHROOM3-205ENST00000481002 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
SHROOM3-205ENST00000481002 ABCA8O94911 1581 aa19.87■□□□□ 0.77
SHROOM3-205ENST00000481002 UHRF1BP1LA0JNW5 1464 aa19.87■□□□□ 0.77
SHROOM3-205ENST00000481002 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
SHROOM3-205ENST00000481002 ABCC2Q92887 1545 aa19.85■□□□□ 0.77
SHROOM3-205ENST00000481002 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
SHROOM3-205ENST00000481002 RAPGEF6Q8TEU7 1601 aa19.82■□□□□ 0.76
SHROOM3-205ENST00000481002 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
SHROOM3-205ENST00000481002 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
SHROOM3-205ENST00000481002 NUP153P49790 1475 aaKnown RBP19.74■□□□□ 0.75
SHROOM3-205ENST00000481002 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
SHROOM3-205ENST00000481002 CASKIN1Q8WXD9 1431 aa19.73■□□□□ 0.75
SHROOM3-205ENST00000481002 ATP10BO94823 1461 aa19.72■□□□□ 0.75
SHROOM3-205ENST00000481002 PCF11O94913 1555 aaKnown RBP19.71■□□□□ 0.75
SHROOM3-205ENST00000481002 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
SHROOM3-205ENST00000481002 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
SHROOM3-205ENST00000481002 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
SHROOM3-205ENST00000481002 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
SHROOM3-205ENST00000481002 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
SHROOM3-205ENST00000481002 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
SHROOM3-205ENST00000481002 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
SHROOM3-205ENST00000481002 ARID3CA6NKF2 412 aa19.64■□□□□ 0.73
SHROOM3-205ENST00000481002 ASXL2Q76L83 1435 aa19.63■□□□□ 0.73
SHROOM3-205ENST00000481002 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
SHROOM3-205ENST00000481002 CCDC18Q5T9S5 1454 aa19.6■□□□□ 0.73
SHROOM3-205ENST00000481002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
SHROOM3-205ENST00000481002 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
SHROOM3-205ENST00000481002 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.72
SHROOM3-205ENST00000481002 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
SHROOM3-205ENST00000481002 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
SHROOM3-205ENST00000481002 CDK11AQ9UQ88 783 aaPredicted RBP19.55■□□□□ 0.72
SHROOM3-205ENST00000481002 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
SHROOM3-205ENST00000481002 DIP2BQ9P265 1576 aa19.53■□□□□ 0.72
SHROOM3-205ENST00000481002 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
SHROOM3-205ENST00000481002 GLI2P10070 1586 aa19.51■□□□□ 0.71
SHROOM3-205ENST00000481002 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
SHROOM3-205ENST00000481002 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
SHROOM3-205ENST00000481002 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
SHROOM3-205ENST00000481002 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
SHROOM3-205ENST00000481002 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
SHROOM3-205ENST00000481002 TROQ12816 1431 aaPredicted RBP19.49■□□□□ 0.71
SHROOM3-205ENST00000481002 MAGI3Q5TCQ9 1506 aa19.48■□□□□ 0.71
SHROOM3-205ENST00000481002 APLP2Q06481 763 aa19.45■□□□□ 0.7
SHROOM3-205ENST00000481002 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
SHROOM3-205ENST00000481002 MAP3K4Q9Y6R4 1608 aa19.43■□□□□ 0.7
SHROOM3-205ENST00000481002 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
SHROOM3-205ENST00000481002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
SHROOM3-205ENST00000481002 KIF14Q15058 1648 aa19.41■□□□□ 0.7
SHROOM3-205ENST00000481002 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SHROOM3-205ENST00000481002 EHBP1L1Q8N3D4 1523 aa19.41■□□□□ 0.7
SHROOM3-205ENST00000481002 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
SHROOM3-205ENST00000481002 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
SHROOM3-205ENST00000481002 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
SHROOM3-205ENST00000481002 TTC37Q6PGP7 1564 aa19.36■□□□□ 0.69
SHROOM3-205ENST00000481002 PPRC1Q5VV67 1664 aaKnown RBP19.36■□□□□ 0.69
SHROOM3-205ENST00000481002 SUPT6HQ7KZ85 1726 aaKnown RBP19.35■□□□□ 0.69
SHROOM3-205ENST00000481002 MYO5CQ9NQX4 1742 aa19.33■□□□□ 0.68
SHROOM3-205ENST00000481002 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
SHROOM3-205ENST00000481002 PLCH2O75038 1416 aa19.3■□□□□ 0.68
SHROOM3-205ENST00000481002 NCOA2Q15596 1464 aa19.29■□□□□ 0.68
SHROOM3-205ENST00000481002 CDC42BPBQ9Y5S2 1711 aa19.29■□□□□ 0.68
SHROOM3-205ENST00000481002 ARAP3Q8WWN8 1544 aa19.29■□□□□ 0.68
SHROOM3-205ENST00000481002 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
SHROOM3-205ENST00000481002 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.68
SHROOM3-205ENST00000481002 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
SHROOM3-205ENST00000481002 CCNB3Q8WWL7 1395 aa19.26■□□□□ 0.67
SHROOM3-205ENST00000481002 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
SHROOM3-205ENST00000481002 NEO1Q92859 1461 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms