RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-208	ENST00000480994	KIAA0586	Q9BVV6	1533 aa		28.97	■■■□□ 2.23
NECAB3-208	ENST00000480994	PRG4	Q92954	1404 aa	Predicted RBP	28.9	■■■□□ 2.22
NECAB3-208	ENST00000480994	JPH4	Q96JJ6	628 aa		28.87	■■■□□ 2.21
NECAB3-208	ENST00000480994	RAPGEF2	Q9Y4G8	1499 aa		28.85	■■■□□ 2.21
NECAB3-208	ENST00000480994	IQGAP2	Q13576	1575 aa		28.84	■■■□□ 2.21
NECAB3-208	ENST00000480994	CTTNBP2	Q8WZ74	1663 aa		28.8	■■■□□ 2.2
NECAB3-208	ENST00000480994	PRX	Q9BXM0	1461 aa		28.72	■■■□□ 2.19
NECAB3-208	ENST00000480994	UGGT2	Q9NYU1	1516 aa		28.68	■■■□□ 2.18
NECAB3-208	ENST00000480994	ADCY10	Q96PN6	1610 aa		28.66	■■■□□ 2.18
NECAB3-208	ENST00000480994	EEA1	Q15075	1411 aa		28.62	■■■□□ 2.17
NECAB3-208	ENST00000480994	CARMIL2	Q6F5E8	1435 aa		28.62	■■■□□ 2.17
NECAB3-208	ENST00000480994	DISP1	Q96F81	1524 aa		28.61	■■■□□ 2.17
NECAB3-208	ENST00000480994	KIAA0556	O60303	1618 aa		28.58	■■■□□ 2.17
NECAB3-208	ENST00000480994	KIF13A	Q9H1H9	1805 aa		28.57	■■■□□ 2.16
NECAB3-208	ENST00000480994	TRH	P20396	242 aa	Predicted RBP	28.55	■■■□□ 2.16
NECAB3-208	ENST00000480994	MAPKBP1	O60336	1514 aa		28.54	■■■□□ 2.16
NECAB3-208	ENST00000480994	TNIK	Q9UKE5	1360 aa		28.54	■■■□□ 2.16
NECAB3-208	ENST00000480994	PTPRG	P23470	1445 aa		28.5	■■■□□ 2.15
NECAB3-208	ENST00000480994	CSRNP3	Q8WYN3	585 aa		28.45	■■■□□ 2.14
NECAB3-208	ENST00000480994	UHRF1BP1L	A0JNW5	1464 aa		28.45	■■■□□ 2.14
NECAB3-208	ENST00000480994	KIF21B	O75037	1637 aa		28.44	■■■□□ 2.14
NECAB3-208	ENST00000480994	GOLGA3	Q08378	1498 aa		28.44	■■■□□ 2.14
NECAB3-208	ENST00000480994	ABCC2	Q92887	1545 aa		28.4	■■■□□ 2.14
NECAB3-208	ENST00000480994	DIP2B	Q9P265	1576 aa		28.39	■■■□□ 2.14
NECAB3-208	ENST00000480994	CHIC1	Q5VXU3	224 aa		28.38	■■■□□ 2.13
NECAB3-208	ENST00000480994	ABCC10	Q5T3U5	1492 aa		28.36	■■■□□ 2.13
NECAB3-208	ENST00000480994	UACA	Q9BZF9	1416 aa		28.35	■■■□□ 2.13
NECAB3-208	ENST00000480994	SAMD9	Q5K651	1589 aa		28.35	■■■□□ 2.13
NECAB3-208	ENST00000480994	NPM1	P06748	294 aa	Known RBP eCLIP	28.33	■■■□□ 2.13
NECAB3-208	ENST00000480994	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.29	■■■□□ 2.12
NECAB3-208	ENST00000480994	KDM5B	Q9UGL1	1544 aa		28.29	■■■□□ 2.12
NECAB3-208	ENST00000480994	ABCA8	O94911	1581 aa		28.28	■■■□□ 2.12
NECAB3-208	ENST00000480994	PLB1	Q6P1J6	1458 aa		28.21	■■■□□ 2.11
NECAB3-208	ENST00000480994	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.2	■■■□□ 2.11
NECAB3-208	ENST00000480994	GLI2	P10070	1586 aa		28.19	■■■□□ 2.1
NECAB3-208	ENST00000480994	ASXL2	Q76L83	1435 aa		28.18	■■■□□ 2.1
NECAB3-208	ENST00000480994	EFCAB5	A4FU69	1503 aa		28.15	■■■□□ 2.1
NECAB3-208	ENST00000480994	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.15	■■■□□ 2.1
NECAB3-208	ENST00000480994	TSPOAP1	O95153	1857 aa		28.15	■■■□□ 2.1
NECAB3-208	ENST00000480994	FAM69C	Q0P6D2	419 aa		28.12	■■■□□ 2.09
NECAB3-208	ENST00000480994	PPRC1	Q5VV67	1664 aa	Known RBP	28.1	■■■□□ 2.09
NECAB3-208	ENST00000480994	RAPGEF6	Q8TEU7	1601 aa		28.09	■■■□□ 2.09
NECAB3-208	ENST00000480994	MAP3K4	Q9Y6R4	1608 aa		28.09	■■■□□ 2.09
NECAB3-208	ENST00000480994	EPRS	P07814	1512 aa	Known RBP	28.06	■■■□□ 2.08
NECAB3-208	ENST00000480994	WDR7	Q9Y4E6	1490 aa		28.05	■■■□□ 2.08
NECAB3-208	ENST00000480994	CFAP43	Q8NDM7	1665 aa		27.99	■■■□□ 2.07
NECAB3-208	ENST00000480994	FHOD3	Q2V2M9	1422 aa		27.97	■■■□□ 2.07
NECAB3-208	ENST00000480994	KDM6B	O15054	1643 aa		27.96	■■■□□ 2.07
NECAB3-208	ENST00000480994	P3H3	Q8IVL6	736 aa		27.95	■■■□□ 2.06
NECAB3-208	ENST00000480994	ATP10B	O94823	1461 aa		27.93	■■■□□ 2.06
NECAB3-208	ENST00000480994	NUP153	P49790	1475 aa	Known RBP	27.91	■■■□□ 2.06
NECAB3-208	ENST00000480994	UBTF	P17480	764 aa	Known RBP	27.86	■■■□□ 2.05
NECAB3-208	ENST00000480994	TEX14	Q8IWB6	1497 aa		27.86	■■■□□ 2.05
NECAB3-208	ENST00000480994	ARHGAP35	Q9NRY4	1499 aa		27.86	■■■□□ 2.05
NECAB3-208	ENST00000480994	ABCA9	Q8IUA7	1624 aa		27.84	■■■□□ 2.05
NECAB3-208	ENST00000480994	MAGI3	Q5TCQ9	1506 aa		27.81	■■■□□ 2.04
NECAB3-208	ENST00000480994	RANGAP1	P46060	587 aa	Predicted RBP	27.8	■■■□□ 2.04
NECAB3-208	ENST00000480994	HECW1	Q76N89	1606 aa		27.78	■■■□□ 2.04
NECAB3-208	ENST00000480994	FMN1	Q68DA7	1419 aa		27.78	■■■□□ 2.04
NECAB3-208	ENST00000480994	CD109	Q6YHK3	1445 aa		27.74	■■■□□ 2.03
NECAB3-208	ENST00000480994	EHMT2	Q96KQ7	1210 aa		27.72	■■■□□ 2.03
NECAB3-208	ENST00000480994	LRRIQ1	Q96JM4	1722 aa		27.71	■■■□□ 2.03
NECAB3-208	ENST00000480994	ARID3C	A6NKF2	412 aa		27.68	■■■□□ 2.02
NECAB3-208	ENST00000480994	KCNH8	Q96L42	1107 aa		27.67	■■■□□ 2.02
NECAB3-208	ENST00000480994	CDK13	Q14004	1512 aa	Known RBP	27.66	■■■□□ 2.02
NECAB3-208	ENST00000480994	COL17A1	Q9UMD9	1497 aa	Predicted RBP	27.65	■■■□□ 2.02
NECAB3-208	ENST00000480994	PCF11	O94913	1555 aa	Known RBP	27.61	■■■□□ 2.01
NECAB3-208	ENST00000480994	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.58	■■■□□ 2.01	3e-6	■■■■□ 20.9
NECAB3-208	ENST00000480994	ARAP3	Q8WWN8	1544 aa		27.58	■■■□□ 2.01
NECAB3-208	ENST00000480994	TTC37	Q6PGP7	1564 aa		27.58	■■■□□ 2.01
NECAB3-208	ENST00000480994	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	27.58	■■■□□ 2.01
NECAB3-208	ENST00000480994	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.58	■■■□□ 2.01
NECAB3-208	ENST00000480994	CFAP74	Q9C0B2	1584 aa		27.56	■■■□□ 2
NECAB3-208	ENST00000480994	NEO1	Q92859	1461 aa		27.56	■■■□□ 2
NECAB3-208	ENST00000480994	PHLDB1	Q86UU1	1377 aa		27.55	■■■□□ 2
NECAB3-208	ENST00000480994	CLIP1	P30622	1438 aa		27.55	■■■□□ 2
NECAB3-208	ENST00000480994	CASKIN1	Q8WXD9	1431 aa		27.55	■■■□□ 2
NECAB3-208	ENST00000480994	PLEKHD1	A6NEE1	506 aa		27.54	■■■□□ 2
NECAB3-208	ENST00000480994	FYCO1	Q9BQS8	1478 aa		27.52	■■■□□ 2
NECAB3-208	ENST00000480994	CCDC18	Q5T9S5	1454 aa		27.51	■■■□□ 2
NECAB3-208	ENST00000480994	MYO5C	Q9NQX4	1742 aa		27.51	■■□□□ 1.99
NECAB3-208	ENST00000480994	KIF14	Q15058	1648 aa		27.49	■■□□□ 1.99
NECAB3-208	ENST00000480994	RICTOR	Q6R327	1708 aa		27.44	■■□□□ 1.98
NECAB3-208	ENST00000480994	FRMPD1	Q5SYB0	1578 aa		27.44	■■□□□ 1.98
NECAB3-208	ENST00000480994	TRO	Q12816	1431 aa	Predicted RBP	27.43	■■□□□ 1.98
NECAB3-208	ENST00000480994	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.41	■■□□□ 1.98
NECAB3-208	ENST00000480994	FANCA	O15360	1455 aa		27.4	■■□□□ 1.98
NECAB3-208	ENST00000480994	CEP162	Q5TB80	1403 aa		27.39	■■□□□ 1.97
NECAB3-208	ENST00000480994	ATP1B4	Q9UN42	357 aa	Predicted RBP	27.37	■■□□□ 1.97
NECAB3-208	ENST00000480994	PLCH2	O75038	1416 aa		27.35	■■□□□ 1.97
NECAB3-208	ENST00000480994	CDC42BPB	Q9Y5S2	1711 aa		27.34	■■□□□ 1.97
NECAB3-208	ENST00000480994	AKNA	Q7Z591	1439 aa		27.33	■■□□□ 1.97
NECAB3-208	ENST00000480994	PREX2	Q70Z35	1606 aa		27.33	■■□□□ 1.97
NECAB3-208	ENST00000480994	ZMYM4	Q5VZL5	1548 aa		27.31	■■□□□ 1.96
NECAB3-208	ENST00000480994	CDC42BPA	Q5VT25	1732 aa		27.3	■■□□□ 1.96
NECAB3-208	ENST00000480994	AEBP2	Q6ZN18	517 aa	Predicted RBP	27.3	■■□□□ 1.96
NECAB3-208	ENST00000480994	ADGRL1	O94910	1474 aa		27.29	■■□□□ 1.96
NECAB3-208	ENST00000480994	ARHGEF40	Q8TER5	1519 aa		27.28	■■□□□ 1.96
NECAB3-208	ENST00000480994	DENND4B	O75064	1496 aa	Predicted RBP	27.28	■■□□□ 1.96
NECAB3-208	ENST00000480994	KDM4F	A0A1W2PPD8	638 aa		27.25	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms