RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
SNRNP200-205ENST00000480835 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
SNRNP200-205ENST00000480835 KIAA0586Q9BVV6 1533 aa23.42■■□□□ 1.34
SNRNP200-205ENST00000480835 ARHGAP35Q9NRY4 1499 aa23.41■■□□□ 1.34
SNRNP200-205ENST00000480835 NUP160Q12769 1436 aa23.41■■□□□ 1.34
SNRNP200-205ENST00000480835 CHD1O14646 1710 aa23.4■■□□□ 1.34
SNRNP200-205ENST00000480835 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
SNRNP200-205ENST00000480835 FBLN2P98095 1184 aa23.38■■□□□ 1.33
SNRNP200-205ENST00000480835 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
SNRNP200-205ENST00000480835 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
SNRNP200-205ENST00000480835 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
SNRNP200-205ENST00000480835 SAMD9Q5K651 1589 aa23.34■■□□□ 1.33
SNRNP200-205ENST00000480835 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.32
SNRNP200-205ENST00000480835 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
SNRNP200-205ENST00000480835 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
SNRNP200-205ENST00000480835 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
SNRNP200-205ENST00000480835 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
SNRNP200-205ENST00000480835 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
SNRNP200-205ENST00000480835 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
SNRNP200-205ENST00000480835 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
SNRNP200-205ENST00000480835 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
SNRNP200-205ENST00000480835 SHROOM2Q13796 1616 aa23.13■■□□□ 1.29
SNRNP200-205ENST00000480835 APLP2Q06481 763 aa23.11■■□□□ 1.29
SNRNP200-205ENST00000480835 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
SNRNP200-205ENST00000480835 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
SNRNP200-205ENST00000480835 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
SNRNP200-205ENST00000480835 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
SNRNP200-205ENST00000480835 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
SNRNP200-205ENST00000480835 CFAP43Q8NDM7 1665 aa23■■□□□ 1.27
SNRNP200-205ENST00000480835 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
SNRNP200-205ENST00000480835 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
SNRNP200-205ENST00000480835 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
SNRNP200-205ENST00000480835 RAPGEF6Q8TEU7 1601 aa22.94■■□□□ 1.26
SNRNP200-205ENST00000480835 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
SNRNP200-205ENST00000480835 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
SNRNP200-205ENST00000480835 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
SNRNP200-205ENST00000480835 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
SNRNP200-205ENST00000480835 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
SNRNP200-205ENST00000480835 PTPRGP23470 1445 aa22.89■■□□□ 1.25
SNRNP200-205ENST00000480835 ABCA8O94911 1581 aa22.87■■□□□ 1.25
SNRNP200-205ENST00000480835 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
SNRNP200-205ENST00000480835 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
SNRNP200-205ENST00000480835 EPRSP07814 1512 aaKnown RBP22.85■■□□□ 1.25
SNRNP200-205ENST00000480835 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
SNRNP200-205ENST00000480835 NUP153P49790 1475 aaKnown RBP22.83■■□□□ 1.25
SNRNP200-205ENST00000480835 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
SNRNP200-205ENST00000480835 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
SNRNP200-205ENST00000480835 EHBP1L1Q8N3D4 1523 aa22.77■■□□□ 1.24
SNRNP200-205ENST00000480835 UACAQ9BZF9 1416 aa22.77■■□□□ 1.24
SNRNP200-205ENST00000480835 CDK13Q14004 1512 aaKnown RBP22.76■■□□□ 1.23
SNRNP200-205ENST00000480835 MTUS2Q5JR59 1369 aa22.76■■□□□ 1.23
SNRNP200-205ENST00000480835 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
SNRNP200-205ENST00000480835 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
SNRNP200-205ENST00000480835 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
SNRNP200-205ENST00000480835 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
SNRNP200-205ENST00000480835 SUPT6HQ7KZ85 1726 aaKnown RBP22.71■■□□□ 1.23
SNRNP200-205ENST00000480835 MAGI3Q5TCQ9 1506 aa22.68■■□□□ 1.22
SNRNP200-205ENST00000480835 ATP10BO94823 1461 aa22.67■■□□□ 1.22
SNRNP200-205ENST00000480835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
SNRNP200-205ENST00000480835 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.21
SNRNP200-205ENST00000480835 RRBP1Q9P2E9 1410 aaKnown RBP22.63■■□□□ 1.21
SNRNP200-205ENST00000480835 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
SNRNP200-205ENST00000480835 TROQ12816 1431 aaPredicted RBP22.62■■□□□ 1.21
SNRNP200-205ENST00000480835 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
SNRNP200-205ENST00000480835 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
SNRNP200-205ENST00000480835 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
SNRNP200-205ENST00000480835 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
SNRNP200-205ENST00000480835 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
SNRNP200-205ENST00000480835 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
SNRNP200-205ENST00000480835 ZCCHC11Q5TAX3 1644 aaKnown RBP22.56■■□□□ 1.2
SNRNP200-205ENST00000480835 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
SNRNP200-205ENST00000480835 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
SNRNP200-205ENST00000480835 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
SNRNP200-205ENST00000480835 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
SNRNP200-205ENST00000480835 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
SNRNP200-205ENST00000480835 KIF14Q15058 1648 aa22.52■■□□□ 1.2
SNRNP200-205ENST00000480835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNRNP200-205ENST00000480835 FGD6Q6ZV73 1430 aa22.49■■□□□ 1.19
SNRNP200-205ENST00000480835 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
SNRNP200-205ENST00000480835 MIA2Q96PC5 1412 aa22.47■■□□□ 1.19
SNRNP200-205ENST00000480835 ABCC10Q5T3U5 1492 aa22.43■■□□□ 1.18
SNRNP200-205ENST00000480835 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
SNRNP200-205ENST00000480835 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.18
SNRNP200-205ENST00000480835 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
SNRNP200-205ENST00000480835 CDC42BPAQ5VT25 1732 aa22.39■■□□□ 1.17
SNRNP200-205ENST00000480835 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
SNRNP200-205ENST00000480835 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
SNRNP200-205ENST00000480835 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
SNRNP200-205ENST00000480835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNRNP200-205ENST00000480835 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
SNRNP200-205ENST00000480835 PREX2Q70Z35 1606 aa22.32■■□□□ 1.16
SNRNP200-205ENST00000480835 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
SNRNP200-205ENST00000480835 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
SNRNP200-205ENST00000480835 TTC37Q6PGP7 1564 aa22.31■■□□□ 1.16
SNRNP200-205ENST00000480835 CFDP1Q9UEE9 299 aaPredicted RBP22.3■■□□□ 1.16
SNRNP200-205ENST00000480835 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
SNRNP200-205ENST00000480835 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
SNRNP200-205ENST00000480835 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
SNRNP200-205ENST00000480835 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
SNRNP200-205ENST00000480835 CAMSAP2Q08AD1 1489 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms