RNA–Protein interactions for RNA: ENST00000480486.1

CHAF1B-202, Transcript of chromatin assembly factor 1 subunit B, humanhuman

TSL 3

Gene CHAF1B, Length 1,152 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1B-202ENST00000480486 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
CHAF1B-202ENST00000480486 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
CHAF1B-202ENST00000480486 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
CHAF1B-202ENST00000480486 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
CHAF1B-202ENST00000480486 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
CHAF1B-202ENST00000480486 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
CHAF1B-202ENST00000480486 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
CHAF1B-202ENST00000480486 ERCC6L2Q5T890 1561 aa19.97■□□□□ 0.79
CHAF1B-202ENST00000480486 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
CHAF1B-202ENST00000480486 NUP160Q12769 1436 aa19.95■□□□□ 0.78
CHAF1B-202ENST00000480486 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
CHAF1B-202ENST00000480486 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
CHAF1B-202ENST00000480486 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
CHAF1B-202ENST00000480486 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
CHAF1B-202ENST00000480486 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
CHAF1B-202ENST00000480486 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
CHAF1B-202ENST00000480486 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
CHAF1B-202ENST00000480486 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.76
CHAF1B-202ENST00000480486 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
CHAF1B-202ENST00000480486 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
CHAF1B-202ENST00000480486 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
CHAF1B-202ENST00000480486 ZBTB22O15209 634 aa19.67■□□□□ 0.74
CHAF1B-202ENST00000480486 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
CHAF1B-202ENST00000480486 ABCC10Q5T3U5 1492 aa19.66■□□□□ 0.74
CHAF1B-202ENST00000480486 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
CHAF1B-202ENST00000480486 DIP2BQ9P265 1576 aa19.62■□□□□ 0.73
CHAF1B-202ENST00000480486 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
CHAF1B-202ENST00000480486 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
CHAF1B-202ENST00000480486 FAM69CQ0P6D2 419 aa19.55■□□□□ 0.72
CHAF1B-202ENST00000480486 FOXD4L1Q9NU39 408 aa19.52■□□□□ 0.72
CHAF1B-202ENST00000480486 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
CHAF1B-202ENST00000480486 KDM6BO15054 1643 aa19.51■□□□□ 0.71
CHAF1B-202ENST00000480486 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHAF1B-202ENST00000480486 CUL7Q14999 1698 aa19.48■□□□□ 0.71
CHAF1B-202ENST00000480486 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
CHAF1B-202ENST00000480486 IGF1RP08069 1367 aa19.42■□□□□ 0.7
CHAF1B-202ENST00000480486 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
CHAF1B-202ENST00000480486 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
CHAF1B-202ENST00000480486 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
CHAF1B-202ENST00000480486 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
CHAF1B-202ENST00000480486 PTPRGP23470 1445 aa19.35■□□□□ 0.69
CHAF1B-202ENST00000480486 GLI2P10070 1586 aa19.35■□□□□ 0.69
CHAF1B-202ENST00000480486 PPRC1Q5VV67 1664 aaKnown RBP19.34■□□□□ 0.69
CHAF1B-202ENST00000480486 DCAF8L1A6NGE4 600 aa19.32■□□□□ 0.68
CHAF1B-202ENST00000480486 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
CHAF1B-202ENST00000480486 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
CHAF1B-202ENST00000480486 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
CHAF1B-202ENST00000480486 CARMIL2Q6F5E8 1435 aa19.3■□□□□ 0.68
CHAF1B-202ENST00000480486 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
CHAF1B-202ENST00000480486 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
CHAF1B-202ENST00000480486 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
CHAF1B-202ENST00000480486 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
CHAF1B-202ENST00000480486 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
CHAF1B-202ENST00000480486 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
CHAF1B-202ENST00000480486 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
CHAF1B-202ENST00000480486 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
CHAF1B-202ENST00000480486 EPRSP07814 1512 aaKnown RBP19.2■□□□□ 0.66
CHAF1B-202ENST00000480486 COL17A1Q9UMD9 1497 aaPredicted RBP19.18■□□□□ 0.66
CHAF1B-202ENST00000480486 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
CHAF1B-202ENST00000480486 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
CHAF1B-202ENST00000480486 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
CHAF1B-202ENST00000480486 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
CHAF1B-202ENST00000480486 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.65
CHAF1B-202ENST00000480486 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
CHAF1B-202ENST00000480486 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
CHAF1B-202ENST00000480486 RAPGEF2Q9Y4G8 1499 aa19.08■□□□□ 0.64
CHAF1B-202ENST00000480486 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
CHAF1B-202ENST00000480486 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
CHAF1B-202ENST00000480486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.645e-6■■■□□ 15.7
CHAF1B-202ENST00000480486 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
CHAF1B-202ENST00000480486 MAGI3Q5TCQ9 1506 aa19.02■□□□□ 0.64
CHAF1B-202ENST00000480486 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
CHAF1B-202ENST00000480486 ABCA8O94911 1581 aa18.98■□□□□ 0.63
CHAF1B-202ENST00000480486 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
CHAF1B-202ENST00000480486 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
CHAF1B-202ENST00000480486 KIF21BO75037 1637 aa18.89■□□□□ 0.62
CHAF1B-202ENST00000480486 ARAP3Q8WWN8 1544 aa18.88■□□□□ 0.61
CHAF1B-202ENST00000480486 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
CHAF1B-202ENST00000480486 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
CHAF1B-202ENST00000480486 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
CHAF1B-202ENST00000480486 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
CHAF1B-202ENST00000480486 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
CHAF1B-202ENST00000480486 ABCA9Q8IUA7 1624 aa18.81■□□□□ 0.6
CHAF1B-202ENST00000480486 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
CHAF1B-202ENST00000480486 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
CHAF1B-202ENST00000480486 ATP10BO94823 1461 aa18.77■□□□□ 0.6
CHAF1B-202ENST00000480486 PTPRMP28827 1452 aa18.75■□□□□ 0.59
CHAF1B-202ENST00000480486 NEO1Q92859 1461 aa18.73■□□□□ 0.59
CHAF1B-202ENST00000480486 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
CHAF1B-202ENST00000480486 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
CHAF1B-202ENST00000480486 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
CHAF1B-202ENST00000480486 BCORL1Q5H9F3 1711 aa18.71■□□□□ 0.59
CHAF1B-202ENST00000480486 RAPGEF6Q8TEU7 1601 aa18.69■□□□□ 0.58
CHAF1B-202ENST00000480486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
CHAF1B-202ENST00000480486 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
CHAF1B-202ENST00000480486 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
CHAF1B-202ENST00000480486 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
CHAF1B-202ENST00000480486 FAM9AQ8IZU1 332 aaPredicted RBP18.66■□□□□ 0.58
CHAF1B-202ENST00000480486 ARHGEF40Q8TER5 1519 aa18.65■□□□□ 0.58
CHAF1B-202ENST00000480486 RAPGEF3O95398 923 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms