RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 KIAA0586Q9BVV6 1533 aa27.27■■□□□ 1.96
SCAMP3-207ENST00000480219 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
SCAMP3-207ENST00000480219 FBLN2P98095 1184 aa27.23■■□□□ 1.95
SCAMP3-207ENST00000480219 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
SCAMP3-207ENST00000480219 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
SCAMP3-207ENST00000480219 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
SCAMP3-207ENST00000480219 UGGT2Q9NYU1 1516 aa27.15■■□□□ 1.94
SCAMP3-207ENST00000480219 CLIP1P30622 1438 aa27.09■■□□□ 1.93
SCAMP3-207ENST00000480219 EFCAB5A4FU69 1503 aa27.09■■□□□ 1.93
SCAMP3-207ENST00000480219 SAMD9Q5K651 1589 aa27.08■■□□□ 1.93
SCAMP3-207ENST00000480219 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
SCAMP3-207ENST00000480219 ARHGAP35Q9NRY4 1499 aa27.05■■□□□ 1.92
SCAMP3-207ENST00000480219 OSCARQ8IYS5 282 aa27.03■■□□□ 1.92
SCAMP3-207ENST00000480219 JPH4Q96JJ6 628 aa27■■□□□ 1.91
SCAMP3-207ENST00000480219 DISP1Q96F81 1524 aa26.99■■□□□ 1.91
SCAMP3-207ENST00000480219 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
SCAMP3-207ENST00000480219 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
SCAMP3-207ENST00000480219 CARMIL2Q6F5E8 1435 aa26.9■■□□□ 1.9
SCAMP3-207ENST00000480219 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
SCAMP3-207ENST00000480219 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
SCAMP3-207ENST00000480219 FHOD3Q2V2M9 1422 aa26.84■■□□□ 1.89
SCAMP3-207ENST00000480219 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
SCAMP3-207ENST00000480219 FMN1Q68DA7 1419 aa26.79■■□□□ 1.88
SCAMP3-207ENST00000480219 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
SCAMP3-207ENST00000480219 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
SCAMP3-207ENST00000480219 CASKIN1Q8WXD9 1431 aa26.69■■□□□ 1.86
SCAMP3-207ENST00000480219 FYCO1Q9BQS8 1478 aa26.67■■□□□ 1.86
SCAMP3-207ENST00000480219 PTPRGP23470 1445 aa26.66■■□□□ 1.86
SCAMP3-207ENST00000480219 PCF11O94913 1555 aaKnown RBP26.66■■□□□ 1.86
SCAMP3-207ENST00000480219 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
SCAMP3-207ENST00000480219 ABCA8O94911 1581 aa26.63■■□□□ 1.85
SCAMP3-207ENST00000480219 RAPGEF6Q8TEU7 1601 aa26.6■■□□□ 1.85
SCAMP3-207ENST00000480219 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
SCAMP3-207ENST00000480219 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
SCAMP3-207ENST00000480219 PLB1Q6P1J6 1458 aa26.56■■□□□ 1.84
SCAMP3-207ENST00000480219 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
SCAMP3-207ENST00000480219 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
SCAMP3-207ENST00000480219 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
SCAMP3-207ENST00000480219 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
SCAMP3-207ENST00000480219 UACAQ9BZF9 1416 aa26.54■■□□□ 1.84
SCAMP3-207ENST00000480219 NUP153P49790 1475 aaKnown RBP26.53■■□□□ 1.84
SCAMP3-207ENST00000480219 ABCC2Q92887 1545 aa26.51■■□□□ 1.83
SCAMP3-207ENST00000480219 CCDC18Q5T9S5 1454 aa26.49■■□□□ 1.83
SCAMP3-207ENST00000480219 LRRIQ1Q96JM4 1722 aa26.48■■□□□ 1.83
SCAMP3-207ENST00000480219 EPRSP07814 1512 aaKnown RBP26.47■■□□□ 1.83
SCAMP3-207ENST00000480219 CFAP43Q8NDM7 1665 aa26.47■■□□□ 1.83
SCAMP3-207ENST00000480219 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
SCAMP3-207ENST00000480219 TTBK1Q5TCY1 1321 aaPredicted RBP26.42■■□□□ 1.82
SCAMP3-207ENST00000480219 ADCY10Q96PN6 1610 aa26.41■■□□□ 1.82
SCAMP3-207ENST00000480219 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.82
SCAMP3-207ENST00000480219 ATP10BO94823 1461 aa26.39■■□□□ 1.82
SCAMP3-207ENST00000480219 CDK13Q14004 1512 aaKnown RBP26.37■■□□□ 1.81
SCAMP3-207ENST00000480219 APLP2Q06481 763 aa26.35■■□□□ 1.81
SCAMP3-207ENST00000480219 LRRC9Q6ZRR7 1453 aa26.34■■□□□ 1.81
SCAMP3-207ENST00000480219 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
SCAMP3-207ENST00000480219 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
SCAMP3-207ENST00000480219 ZCCHC11Q5TAX3 1644 aaKnown RBP26.29■■□□□ 1.8
SCAMP3-207ENST00000480219 MAGI3Q5TCQ9 1506 aa26.29■■□□□ 1.8
SCAMP3-207ENST00000480219 EHBP1L1Q8N3D4 1523 aa26.27■■□□□ 1.8
SCAMP3-207ENST00000480219 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
SCAMP3-207ENST00000480219 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
SCAMP3-207ENST00000480219 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
SCAMP3-207ENST00000480219 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
SCAMP3-207ENST00000480219 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.79
SCAMP3-207ENST00000480219 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
SCAMP3-207ENST00000480219 MAPKBP1O60336 1514 aa26.14■■□□□ 1.78
SCAMP3-207ENST00000480219 PLEKHD1A6NEE1 506 aa26.14■■□□□ 1.78
SCAMP3-207ENST00000480219 SUPT6HQ7KZ85 1726 aaKnown RBP26.14■■□□□ 1.77
SCAMP3-207ENST00000480219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
SCAMP3-207ENST00000480219 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
SCAMP3-207ENST00000480219 WDR7Q9Y4E6 1490 aa26.11■■□□□ 1.77
SCAMP3-207ENST00000480219 NPM1P06748 294 aaKnown RBP eCLIP26.11■■□□□ 1.77
SCAMP3-207ENST00000480219 NCOA2Q15596 1464 aa26.1■■□□□ 1.77
SCAMP3-207ENST00000480219 ASXL2Q76L83 1435 aa26.09■■□□□ 1.77
SCAMP3-207ENST00000480219 KIF14Q15058 1648 aa26.08■■□□□ 1.77
SCAMP3-207ENST00000480219 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
SCAMP3-207ENST00000480219 ABCC10Q5T3U5 1492 aa26.05■■□□□ 1.76
SCAMP3-207ENST00000480219 PHLDB1Q86UU1 1377 aa26.02■■□□□ 1.76
SCAMP3-207ENST00000480219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
SCAMP3-207ENST00000480219 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
SCAMP3-207ENST00000480219 RRBP1Q9P2E9 1410 aaKnown RBP25.97■■□□□ 1.75
SCAMP3-207ENST00000480219 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
SCAMP3-207ENST00000480219 GPATCH8Q9UKJ3 1502 aaKnown RBP25.94■■□□□ 1.74
SCAMP3-207ENST00000480219 TTC37Q6PGP7 1564 aa25.94■■□□□ 1.74
SCAMP3-207ENST00000480219 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
SCAMP3-207ENST00000480219 GLI2P10070 1586 aa25.93■■□□□ 1.74
SCAMP3-207ENST00000480219 ITSN2Q9NZM3 1697 aa25.93■■□□□ 1.74
SCAMP3-207ENST00000480219 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
SCAMP3-207ENST00000480219 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
SCAMP3-207ENST00000480219 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
SCAMP3-207ENST00000480219 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
SCAMP3-207ENST00000480219 PREX2Q70Z35 1606 aa25.89■■□□□ 1.74
SCAMP3-207ENST00000480219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.88■■□□□ 1.734e-6■■■■■ 30.2
SCAMP3-207ENST00000480219 DIP2BQ9P265 1576 aa25.87■■□□□ 1.73
SCAMP3-207ENST00000480219 TCOF1Q13428 1488 aaKnown RBP25.86■■□□□ 1.73
SCAMP3-207ENST00000480219 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
SCAMP3-207ENST00000480219 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
SCAMP3-207ENST00000480219 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
SCAMP3-207ENST00000480219 PLCH2O75038 1416 aa25.85■■□□□ 1.73
SCAMP3-207ENST00000480219 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms