RNA–Protein interactions for RNA: ENST00000480143.5

NME1-207, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2 BASIC

Gene NME1, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-207ENST00000480143 EHMT2Q96KQ7 1210 aa31.43■■■□□ 2.62
NME1-207ENST00000480143 CEP170Q5SW79 1584 aa31.39■■■□□ 2.62
NME1-207ENST00000480143 CTTNBP2Q8WZ74 1663 aa31.38■■■□□ 2.61
NME1-207ENST00000480143 OSCARQ8IYS5 282 aa31.35■■■□□ 2.61
NME1-207ENST00000480143 IQGAP2Q13576 1575 aa31.32■■■□□ 2.6
NME1-207ENST00000480143 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
NME1-207ENST00000480143 UGGT2Q9NYU1 1516 aa31.23■■■□□ 2.59
NME1-207ENST00000480143 CEP162Q5TB80 1403 aa31.23■■■□□ 2.59
NME1-207ENST00000480143 JPH4Q96JJ6 628 aa31.22■■■□□ 2.59
NME1-207ENST00000480143 CLIP1P30622 1438 aa31.19■■■□□ 2.58
NME1-207ENST00000480143 EFCAB5A4FU69 1503 aa31.17■■■□□ 2.58
NME1-207ENST00000480143 SHROOM2Q13796 1616 aa31.13■■■□□ 2.57
NME1-207ENST00000480143 CARMIL2Q6F5E8 1435 aa31.1■■■□□ 2.57
NME1-207ENST00000480143 SAMD9Q5K651 1589 aa31.09■■■□□ 2.57
NME1-207ENST00000480143 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
NME1-207ENST00000480143 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
NME1-207ENST00000480143 RANGAP1P46060 587 aaPredicted RBP31.03■■■□□ 2.56
NME1-207ENST00000480143 PRG4Q92954 1404 aaPredicted RBP31.03■■■□□ 2.56
NME1-207ENST00000480143 KIAA0556O60303 1618 aa30.98■■■□□ 2.55
NME1-207ENST00000480143 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
NME1-207ENST00000480143 FMN1Q68DA7 1419 aa30.9■■■□□ 2.54
NME1-207ENST00000480143 P3H3Q8IVL6 736 aa30.89■■■□□ 2.54
NME1-207ENST00000480143 FHOD3Q2V2M9 1422 aa30.89■■■□□ 2.53
NME1-207ENST00000480143 VPS8Q8N3P4 1428 aa30.85■■■□□ 2.53
NME1-207ENST00000480143 PTPRGP23470 1445 aa30.81■■■□□ 2.52
NME1-207ENST00000480143 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
NME1-207ENST00000480143 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
NME1-207ENST00000480143 CASKIN1Q8WXD9 1431 aa30.72■■■□□ 2.51
NME1-207ENST00000480143 FYCO1Q9BQS8 1478 aa30.67■■■□□ 2.5
NME1-207ENST00000480143 UACAQ9BZF9 1416 aa30.64■■■□□ 2.49
NME1-207ENST00000480143 ABCA8O94911 1581 aa30.63■■■□□ 2.49
NME1-207ENST00000480143 UHRF1BP1LA0JNW5 1464 aa30.6■■■□□ 2.49
NME1-207ENST00000480143 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
NME1-207ENST00000480143 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
NME1-207ENST00000480143 RAPGEF6Q8TEU7 1601 aa30.6■■■□□ 2.49
NME1-207ENST00000480143 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
NME1-207ENST00000480143 PCF11O94913 1555 aaKnown RBP30.58■■■□□ 2.49
NME1-207ENST00000480143 PLB1Q6P1J6 1458 aa30.58■■■□□ 2.49
NME1-207ENST00000480143 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
NME1-207ENST00000480143 HECW1Q76N89 1606 aa30.57■■■□□ 2.48
NME1-207ENST00000480143 MAP3K1Q13233 1512 aa30.56■■■□□ 2.48
NME1-207ENST00000480143 APLP2Q06481 763 aa30.54■■■□□ 2.48
NME1-207ENST00000480143 ABCC2Q92887 1545 aa30.53■■■□□ 2.48
NME1-207ENST00000480143 DNAJC5Q9H3Z4 198 aa30.52■■■□□ 2.48
NME1-207ENST00000480143 CCDC18Q5T9S5 1454 aa30.51■■■□□ 2.48
NME1-207ENST00000480143 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
NME1-207ENST00000480143 ATP1B4Q9UN42 357 aaPredicted RBP30.48■■■□□ 2.47
NME1-207ENST00000480143 EPRSP07814 1512 aaKnown RBP30.47■■■□□ 2.47
NME1-207ENST00000480143 KDM5BQ9UGL1 1544 aa30.42■■■□□ 2.46
NME1-207ENST00000480143 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
NME1-207ENST00000480143 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
NME1-207ENST00000480143 ATP10BO94823 1461 aa30.39■■■□□ 2.46
NME1-207ENST00000480143 TIAM1Q13009 1591 aa30.39■■■□□ 2.46
NME1-207ENST00000480143 ADCY10Q96PN6 1610 aa30.37■■■□□ 2.45
NME1-207ENST00000480143 CFAP43Q8NDM7 1665 aa30.35■■■□□ 2.45
NME1-207ENST00000480143 NPM1P06748 294 aaKnown RBP eCLIP30.33■■■□□ 2.45
NME1-207ENST00000480143 LRRIQ1Q96JM4 1722 aa30.32■■■□□ 2.44
NME1-207ENST00000480143 CDK13Q14004 1512 aaKnown RBP30.31■■■□□ 2.44
NME1-207ENST00000480143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.29■■■□□ 2.44
NME1-207ENST00000480143 HNRNPUL2Q1KMD3 747 aaKnown RBP30.29■■■□□ 2.44
NME1-207ENST00000480143 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
NME1-207ENST00000480143 PLEKHD1A6NEE1 506 aa30.28■■■□□ 2.44
NME1-207ENST00000480143 MTUS2Q5JR59 1369 aa30.25■■■□□ 2.43
NME1-207ENST00000480143 ZCCHC11Q5TAX3 1644 aaKnown RBP30.25■■■□□ 2.43
NME1-207ENST00000480143 KANK4Q5T7N3 995 aaPredicted RBP30.23■■■□□ 2.43
NME1-207ENST00000480143 ARID3CA6NKF2 412 aa30.22■■■□□ 2.43
NME1-207ENST00000480143 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
NME1-207ENST00000480143 TROQ12816 1431 aaPredicted RBP30.22■■■□□ 2.43
NME1-207ENST00000480143 MAGI3Q5TCQ9 1506 aa30.15■■■□□ 2.42
NME1-207ENST00000480143 MAPKBP1O60336 1514 aa30.12■■■□□ 2.41
NME1-207ENST00000480143 WDR7Q9Y4E6 1490 aa30.11■■■□□ 2.41
NME1-207ENST00000480143 ASXL2Q76L83 1435 aa30.1■■■□□ 2.41
NME1-207ENST00000480143 SUPT6HQ7KZ85 1726 aaKnown RBP30.06■■■□□ 2.4
NME1-207ENST00000480143 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
NME1-207ENST00000480143 PPARGC1BQ86YN6 1023 aaKnown RBP30.02■■■□□ 2.4
NME1-207ENST00000480143 KIF14Q15058 1648 aa30.02■■■□□ 2.4
NME1-207ENST00000480143 ABCC10Q5T3U5 1492 aa29.96■■■□□ 2.39
NME1-207ENST00000480143 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
NME1-207ENST00000480143 CCNB3Q8WWL7 1395 aa29.92■■■□□ 2.38
NME1-207ENST00000480143 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
NME1-207ENST00000480143 MYOM3Q5VTT5 1437 aa29.9■■■□□ 2.38
NME1-207ENST00000480143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.385e-7■■■□□ 18.6
NME1-207ENST00000480143 MIA2Q96PC5 1412 aa29.88■■■□□ 2.37
NME1-207ENST00000480143 GLI2P10070 1586 aa29.88■■■□□ 2.37
NME1-207ENST00000480143 ABCA9Q8IUA7 1624 aa29.87■■■□□ 2.37
NME1-207ENST00000480143 GPATCH8Q9UKJ3 1502 aaKnown RBP29.86■■■□□ 2.37
NME1-207ENST00000480143 ARAP3Q8WWN8 1544 aa29.83■■■□□ 2.37
NME1-207ENST00000480143 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
NME1-207ENST00000480143 PLCH2O75038 1416 aa29.82■■■□□ 2.36
NME1-207ENST00000480143 ITSN2Q9NZM3 1697 aa29.82■■■□□ 2.36
NME1-207ENST00000480143 FGD6Q6ZV73 1430 aa29.8■■■□□ 2.36
NME1-207ENST00000480143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.8■■■□□ 2.365e-11■■■■■ 54.8
NME1-207ENST00000480143 TTC37Q6PGP7 1564 aa29.8■■■□□ 2.36
NME1-207ENST00000480143 DIP2BQ9P265 1576 aa29.78■■■□□ 2.36
NME1-207ENST00000480143 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
NME1-207ENST00000480143 TRIM26Q12899 539 aaPredicted RBP29.77■■■□□ 2.36
NME1-207ENST00000480143 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
NME1-207ENST00000480143 CD109Q6YHK3 1445 aa29.75■■■□□ 2.35
NME1-207ENST00000480143 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
NME1-207ENST00000480143 MYO5CQ9NQX4 1742 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms