RNA–Protein interactions for RNA: ENST00000479991.1

RTL5-201, Transcript of retrotransposon Gag like 5, humanhuman

TSL 1 (best)

Gene RTL5, Length 4,339 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL5-201ENST00000479991 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
RTL5-201ENST00000479991 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
RTL5-201ENST00000479991 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
RTL5-201ENST00000479991 NBR1Q14596 966 aa17.71■□□□□ 0.43
RTL5-201ENST00000479991 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
RTL5-201ENST00000479991 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
RTL5-201ENST00000479991 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
RTL5-201ENST00000479991 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
RTL5-201ENST00000479991 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
RTL5-201ENST00000479991 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
RTL5-201ENST00000479991 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
RTL5-201ENST00000479991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
RTL5-201ENST00000479991 EIF4G2P78344 907 aaKnown RBP eCLIP17.61■□□□□ 0.41
RTL5-201ENST00000479991 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
RTL5-201ENST00000479991 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
RTL5-201ENST00000479991 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
RTL5-201ENST00000479991 FOXD1Q16676 465 aa17.55■□□□□ 0.4
RTL5-201ENST00000479991 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
RTL5-201ENST00000479991 ANP32EQ9BTT0 268 aa17.54■□□□□ 0.4
RTL5-201ENST00000479991 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
RTL5-201ENST00000479991 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.39
RTL5-201ENST00000479991 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.39
RTL5-201ENST00000479991 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
RTL5-201ENST00000479991 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
RTL5-201ENST00000479991 RGL3Q3MIN7 710 aa17.51■□□□□ 0.39
RTL5-201ENST00000479991 RAB3GAP2Q9H2M9 1393 aa17.49■□□□□ 0.39
RTL5-201ENST00000479991 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
RTL5-201ENST00000479991 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
RTL5-201ENST00000479991 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
RTL5-201ENST00000479991 CUX2O14529 1486 aa17.45■□□□□ 0.38
RTL5-201ENST00000479991 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
RTL5-201ENST00000479991 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
RTL5-201ENST00000479991 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
RTL5-201ENST00000479991 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
RTL5-201ENST00000479991 KIF21BO75037 1637 aa17.4■□□□□ 0.38
RTL5-201ENST00000479991 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
RTL5-201ENST00000479991 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
RTL5-201ENST00000479991 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
RTL5-201ENST00000479991 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
RTL5-201ENST00000479991 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
RTL5-201ENST00000479991 HSPA5P11021 654 aaKnown RBP17.38■□□□□ 0.37
RTL5-201ENST00000479991 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
RTL5-201ENST00000479991 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
RTL5-201ENST00000479991 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
RTL5-201ENST00000479991 ARXQ96QS3 562 aa17.35■□□□□ 0.37
RTL5-201ENST00000479991 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.37
RTL5-201ENST00000479991 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
RTL5-201ENST00000479991 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
RTL5-201ENST00000479991 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
RTL5-201ENST00000479991 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
RTL5-201ENST00000479991 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
RTL5-201ENST00000479991 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.36
RTL5-201ENST00000479991 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
RTL5-201ENST00000479991 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
RTL5-201ENST00000479991 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
RTL5-201ENST00000479991 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
RTL5-201ENST00000479991 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
RTL5-201ENST00000479991 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
RTL5-201ENST00000479991 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
RTL5-201ENST00000479991 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
RTL5-201ENST00000479991 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
RTL5-201ENST00000479991 SLC24A1O60721 1099 aa17.22■□□□□ 0.35
RTL5-201ENST00000479991 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
RTL5-201ENST00000479991 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
RTL5-201ENST00000479991 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
RTL5-201ENST00000479991 MPHOSPH9Q99550 1183 aa17.19■□□□□ 0.34
RTL5-201ENST00000479991 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
RTL5-201ENST00000479991 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
RTL5-201ENST00000479991 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
RTL5-201ENST00000479991 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
RTL5-201ENST00000479991 CUX1P39880 1505 aa17.16■□□□□ 0.34
RTL5-201ENST00000479991 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
RTL5-201ENST00000479991 PKD2Q13563 968 aa17.14■□□□□ 0.33
RTL5-201ENST00000479991 RGS3P49796 1198 aa17.14■□□□□ 0.33
RTL5-201ENST00000479991 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
RTL5-201ENST00000479991 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
RTL5-201ENST00000479991 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
RTL5-201ENST00000479991 CFTRP13569 1480 aa17.1■□□□□ 0.33
RTL5-201ENST00000479991 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
RTL5-201ENST00000479991 IGF1RP08069 1367 aa17.08■□□□□ 0.33
RTL5-201ENST00000479991 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.33
RTL5-201ENST00000479991 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
RTL5-201ENST00000479991 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
RTL5-201ENST00000479991 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
RTL5-201ENST00000479991 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
RTL5-201ENST00000479991 NESP48681 1621 aa17.05■□□□□ 0.32
RTL5-201ENST00000479991 NEFMP07197 916 aa17.05■□□□□ 0.32
RTL5-201ENST00000479991 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
RTL5-201ENST00000479991 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
RTL5-201ENST00000479991 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
RTL5-201ENST00000479991 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
RTL5-201ENST00000479991 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
RTL5-201ENST00000479991 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
RTL5-201ENST00000479991 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
RTL5-201ENST00000479991 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
RTL5-201ENST00000479991 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
RTL5-201ENST00000479991 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
RTL5-201ENST00000479991 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
RTL5-201ENST00000479991 NUP155O75694 1391 aa16.94■□□□□ 0.3
RTL5-201ENST00000479991 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms