RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 MTUS2Q5JR59 1369 aa8.63□□□□□ -1.03
CPS1-207ENST00000479988 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
CPS1-207ENST00000479988 NESP48681 1621 aa8.62□□□□□ -1.03
CPS1-207ENST00000479988 CHGAP10645 457 aaKnown RBP8.61□□□□□ -1.03
CPS1-207ENST00000479988 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
CPS1-207ENST00000479988 NCBP3Q53F19 620 aaKnown RBP8.6□□□□□ -1.03
CPS1-207ENST00000479988 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
CPS1-207ENST00000479988 LAMC3Q9Y6N6 1575 aa8.56□□□□□ -1.04
CPS1-207ENST00000479988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.55□□□□□ -1.04
CPS1-207ENST00000479988 MLECQ14165 292 aa8.55□□□□□ -1.04
CPS1-207ENST00000479988 CFDP1Q9UEE9 299 aaPredicted RBP8.55□□□□□ -1.04
CPS1-207ENST00000479988 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
CPS1-207ENST00000479988 FAM69CQ0P6D2 419 aa8.54□□□□□ -1.04
CPS1-207ENST00000479988 CFTRP13569 1480 aa8.54□□□□□ -1.04
CPS1-207ENST00000479988 PPP1R15AO75807 674 aaPredicted RBP8.54□□□□□ -1.04
CPS1-207ENST00000479988 CENPBP07199 599 aaPredicted RBP8.54□□□□□ -1.04
CPS1-207ENST00000479988 PTPRGP23470 1445 aa8.53□□□□□ -1.04
CPS1-207ENST00000479988 POLR3GLQ9BT43 218 aa8.53□□□□□ -1.04
CPS1-207ENST00000479988 VPS8Q8N3P4 1428 aa8.53□□□□□ -1.04
CPS1-207ENST00000479988 C14orf37Q86TY3 774 aa8.53□□□□□ -1.04
CPS1-207ENST00000479988 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
CPS1-207ENST00000479988 AQRO60306 1485 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPS1-207ENST00000479988 GRIN2BQ13224 1484 aa8.52□□□□□ -1.05
CPS1-207ENST00000479988 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
CPS1-207ENST00000479988 KIF21BO75037 1637 aa8.51□□□□□ -1.05
CPS1-207ENST00000479988 EFCAB2Q5VUJ9 269 aa8.51□□□□□ -1.05
CPS1-207ENST00000479988 RUSC2Q8N2Y8 1516 aa8.5□□□□□ -1.05
CPS1-207ENST00000479988 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
CPS1-207ENST00000479988 TOP2BQ02880 1626 aa8.49□□□□□ -1.05
CPS1-207ENST00000479988 RAD54L2Q9Y4B4 1467 aa8.48□□□□□ -1.05
CPS1-207ENST00000479988 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
CPS1-207ENST00000479988 ZNF326Q5BKZ1 582 aaKnown RBP8.48□□□□□ -1.05
CPS1-207ENST00000479988 FHAD1B1AJZ9 1412 aa8.46□□□□□ -1.05
CPS1-207ENST00000479988 ERICH3Q5RHP9 1530 aa8.46□□□□□ -1.05
CPS1-207ENST00000479988 CHIC2Q9UKJ5 165 aa8.46□□□□□ -1.05
CPS1-207ENST00000479988 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.06
CPS1-207ENST00000479988 SCAF1Q9H7N4 1312 aaKnown RBP8.45□□□□□ -1.06
CPS1-207ENST00000479988 CCNB3Q8WWL7 1395 aa8.45□□□□□ -1.06
CPS1-207ENST00000479988 CLSPNQ9HAW4 1339 aa8.45□□□□□ -1.06
CPS1-207ENST00000479988 TOPBP1Q92547 1522 aa8.45□□□□□ -1.06
CPS1-207ENST00000479988 DIEXFQ68CQ4 756 aaKnown RBP8.44□□□□□ -1.06
CPS1-207ENST00000479988 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
CPS1-207ENST00000479988 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
CPS1-207ENST00000479988 PRXQ9BXM0 1461 aa8.42□□□□□ -1.06
CPS1-207ENST00000479988 GGT6Q6P531 493 aa8.41□□□□□ -1.06
CPS1-207ENST00000479988 FMN1Q68DA7 1419 aa8.41□□□□□ -1.06
CPS1-207ENST00000479988 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
CPS1-207ENST00000479988 KANK1Q14678 1352 aa8.4□□□□□ -1.06
CPS1-207ENST00000479988 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.06
CPS1-207ENST00000479988 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.07
CPS1-207ENST00000479988 PRG4Q92954 1404 aaPredicted RBP8.4□□□□□ -1.07
CPS1-207ENST00000479988 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
CPS1-207ENST00000479988 IGF1RP08069 1367 aa8.39□□□□□ -1.07
CPS1-207ENST00000479988 CUX1P39880 1505 aa8.39□□□□□ -1.07
CPS1-207ENST00000479988 POLA1P09884 1462 aaPredicted RBP8.39□□□□□ -1.07
CPS1-207ENST00000479988 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
CPS1-207ENST00000479988 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
CPS1-207ENST00000479988 SPAG9O60271 1321 aaKnown RBP8.35□□□□□ -1.07
CPS1-207ENST00000479988 DNAJC5Q9H3Z4 198 aa8.34□□□□□ -1.07
CPS1-207ENST00000479988 KCNA4P22459 653 aa8.34□□□□□ -1.07
CPS1-207ENST00000479988 MAGI1Q96QZ7 1491 aaPredicted RBP8.34□□□□□ -1.07
CPS1-207ENST00000479988 RRP7BPQ9NSQ0 103 aa8.33□□□□□ -1.08
CPS1-207ENST00000479988 RSPH4AQ5TD94 716 aa8.33□□□□□ -1.08
CPS1-207ENST00000479988 SENP3Q9H4L4 574 aaPredicted RBP8.33□□□□□ -1.08
CPS1-207ENST00000479988 SYNJ2O15056 1496 aa8.33□□□□□ -1.08
CPS1-207ENST00000479988 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
CPS1-207ENST00000479988 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
CPS1-207ENST00000479988 KIF3BO15066 747 aa8.31□□□□□ -1.08
CPS1-207ENST00000479988 NEFMP07197 916 aa8.31□□□□□ -1.08
CPS1-207ENST00000479988 ARXQ96QS3 562 aa8.31□□□□□ -1.08
CPS1-207ENST00000479988 FHOD3Q2V2M9 1422 aa8.3□□□□□ -1.08
CPS1-207ENST00000479988 CCDC18Q5T9S5 1454 aa8.3□□□□□ -1.08
CPS1-207ENST00000479988 URB2Q14146 1524 aaKnown RBP8.3□□□□□ -1.08
CPS1-207ENST00000479988 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
CPS1-207ENST00000479988 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
CPS1-207ENST00000479988 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
CPS1-207ENST00000479988 ABCA10Q8WWZ4 1543 aa8.28□□□□□ -1.08
CPS1-207ENST00000479988 A0A0G2JS52 829 aa8.28□□□□□ -1.08
CPS1-207ENST00000479988 PLEKHG5O94827 1062 aa8.27□□□□□ -1.08
CPS1-207ENST00000479988 POGZQ7Z3K3 1410 aa8.27□□□□□ -1.09
CPS1-207ENST00000479988 ARAP1Q96P48 1450 aa8.27□□□□□ -1.09
CPS1-207ENST00000479988 ARHGAP35Q9NRY4 1499 aa8.27□□□□□ -1.09
CPS1-207ENST00000479988 ZNF608Q9ULD9 1512 aaPredicted RBP8.27□□□□□ -1.09
CPS1-207ENST00000479988 LMOD2Q6P5Q4 547 aa8.27□□□□□ -1.09
CPS1-207ENST00000479988 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
CPS1-207ENST00000479988 EFCAB5A4FU69 1503 aa8.26□□□□□ -1.09
CPS1-207ENST00000479988 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
CPS1-207ENST00000479988 HNRNPMP52272 730 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPS1-207ENST00000479988 KDM2AQ9Y2K7 1162 aa8.25□□□□□ -1.09
CPS1-207ENST00000479988 PRDM2Q13029 1718 aa8.25□□□□□ -1.09
CPS1-207ENST00000479988 KIAA0586Q9BVV6 1533 aa8.25□□□□□ -1.09
CPS1-207ENST00000479988 SETD5Q9C0A6 1442 aa8.24□□□□□ -1.09
CPS1-207ENST00000479988 RRBP1Q9P2E9 1410 aaKnown RBP8.24□□□□□ -1.09
CPS1-207ENST00000479988 RGL3Q3MIN7 710 aa8.24□□□□□ -1.09
CPS1-207ENST00000479988 POGKQ9P215 609 aa8.24□□□□□ -1.09
CPS1-207ENST00000479988 GRIN2AQ12879 1464 aa8.24□□□□□ -1.09
CPS1-207ENST00000479988 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
CPS1-207ENST00000479988 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
CPS1-207ENST00000479988 UACAQ9BZF9 1416 aa8.23□□□□□ -1.09
CPS1-207ENST00000479988 CUL7Q14999 1698 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms