RNA–Protein interactions for RNA: ENST00000479942.5

ATG16L1-215, Transcript of autophagy related 16 like 1, humanhuman

TSL 1 (best)

Gene ATG16L1, Length 3,559 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L1-215ENST00000479942 CUX1P39880 1505 aa14.81□□□□□ -0.04
ATG16L1-215ENST00000479942 FHOD3Q2V2M9 1422 aa14.81□□□□□ -0.04
ATG16L1-215ENST00000479942 FKBP8Q14318 412 aa14.8□□□□□ -0.04
ATG16L1-215ENST00000479942 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
ATG16L1-215ENST00000479942 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
ATG16L1-215ENST00000479942 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
ATG16L1-215ENST00000479942 ARHGAP35Q9NRY4 1499 aa14.75□□□□□ -0.05
ATG16L1-215ENST00000479942 NESP48681 1621 aa14.75□□□□□ -0.05
ATG16L1-215ENST00000479942 PHLDB1Q86UU1 1377 aa14.75□□□□□ -0.05
ATG16L1-215ENST00000479942 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
ATG16L1-215ENST00000479942 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
ATG16L1-215ENST00000479942 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
ATG16L1-215ENST00000479942 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
ATG16L1-215ENST00000479942 ANP32CO43423 234 aa14.7□□□□□ -0.06
ATG16L1-215ENST00000479942 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
ATG16L1-215ENST00000479942 TONSLQ96HA7 1378 aa14.67□□□□□ -0.06
ATG16L1-215ENST00000479942 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
ATG16L1-215ENST00000479942 NEFLP07196 543 aa14.67□□□□□ -0.06
ATG16L1-215ENST00000479942 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
ATG16L1-215ENST00000479942 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
ATG16L1-215ENST00000479942 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
ATG16L1-215ENST00000479942 CFTRP13569 1480 aa14.64□□□□□ -0.07
ATG16L1-215ENST00000479942 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
ATG16L1-215ENST00000479942 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
ATG16L1-215ENST00000479942 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
ATG16L1-215ENST00000479942 SALL2Q9Y467 1007 aaPredicted RBP14.57□□□□□ -0.08
ATG16L1-215ENST00000479942 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
ATG16L1-215ENST00000479942 ZNF644Q9H582 1327 aaPredicted RBP14.55□□□□□ -0.08
ATG16L1-215ENST00000479942 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
ATG16L1-215ENST00000479942 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
ATG16L1-215ENST00000479942 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
ATG16L1-215ENST00000479942 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
ATG16L1-215ENST00000479942 MYT1Q01538 1121 aa14.51□□□□□ -0.09
ATG16L1-215ENST00000479942 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
ATG16L1-215ENST00000479942 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
ATG16L1-215ENST00000479942 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
ATG16L1-215ENST00000479942 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
ATG16L1-215ENST00000479942 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
ATG16L1-215ENST00000479942 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
ATG16L1-215ENST00000479942 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
ATG16L1-215ENST00000479942 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.12e-8■■■■■ 33.4
ATG16L1-215ENST00000479942 L3MBTL2Q969R5 705 aa14.45□□□□□ -0.1
ATG16L1-215ENST00000479942 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
ATG16L1-215ENST00000479942 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
ATG16L1-215ENST00000479942 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
ATG16L1-215ENST00000479942 MRS2Q9HD23 443 aa14.43□□□□□ -0.1
ATG16L1-215ENST00000479942 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
ATG16L1-215ENST00000479942 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
ATG16L1-215ENST00000479942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■■□□ 17.9
ATG16L1-215ENST00000479942 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
ATG16L1-215ENST00000479942 MPHOSPH9Q99550 1183 aa14.42□□□□□ -0.1
ATG16L1-215ENST00000479942 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
ATG16L1-215ENST00000479942 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
ATG16L1-215ENST00000479942 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
ATG16L1-215ENST00000479942 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
ATG16L1-215ENST00000479942 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.12e-6■■■■■ 26.9
ATG16L1-215ENST00000479942 PCF11O94913 1555 aaKnown RBP14.39□□□□□ -0.11
ATG16L1-215ENST00000479942 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
ATG16L1-215ENST00000479942 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
ATG16L1-215ENST00000479942 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
ATG16L1-215ENST00000479942 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
ATG16L1-215ENST00000479942 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
ATG16L1-215ENST00000479942 CCDC18Q5T9S5 1454 aa14.36□□□□□ -0.11
ATG16L1-215ENST00000479942 B4GALNT3Q6L9W6 998 aa14.36□□□□□ -0.11
ATG16L1-215ENST00000479942 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
ATG16L1-215ENST00000479942 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
ATG16L1-215ENST00000479942 FMN1Q68DA7 1419 aa14.33□□□□□ -0.12
ATG16L1-215ENST00000479942 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
ATG16L1-215ENST00000479942 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
ATG16L1-215ENST00000479942 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
ATG16L1-215ENST00000479942 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
ATG16L1-215ENST00000479942 PKD2Q13563 968 aa14.29□□□□□ -0.12
ATG16L1-215ENST00000479942 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
ATG16L1-215ENST00000479942 CASKIN1Q8WXD9 1431 aa14.28□□□□□ -0.12
ATG16L1-215ENST00000479942 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.13
ATG16L1-215ENST00000479942 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.13
ATG16L1-215ENST00000479942 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATG16L1-215ENST00000479942 NAIPQ13075 1403 aa14.24□□□□□ -0.13
ATG16L1-215ENST00000479942 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
ATG16L1-215ENST00000479942 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
ATG16L1-215ENST00000479942 CCER2I3L3R5 266 aa14.22□□□□□ -0.13
ATG16L1-215ENST00000479942 TMC1Q8TDI8 760 aa14.21□□□□□ -0.13
ATG16L1-215ENST00000479942 CARD11Q9BXL7 1154 aa14.21□□□□□ -0.13
ATG16L1-215ENST00000479942 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
ATG16L1-215ENST00000479942 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
ATG16L1-215ENST00000479942 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
ATG16L1-215ENST00000479942 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
ATG16L1-215ENST00000479942 TSPY4P0CV99 314 aa14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 TSPY10P0CW01 314 aa14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 TIMELESSQ9UNS1 1208 aa14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 PRKRIP1Q9H875 184 aaPredicted RBP14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
ATG16L1-215ENST00000479942 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
ATG16L1-215ENST00000479942 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
ATG16L1-215ENST00000479942 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
ATG16L1-215ENST00000479942 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
ATG16L1-215ENST00000479942 KIF7Q2M1P5 1343 aa14.16□□□□□ -0.14
ATG16L1-215ENST00000479942 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
ATG16L1-215ENST00000479942 NBR1Q14596 966 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms