RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
TNXB-204ENST00000479795 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
TNXB-204ENST00000479795 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
TNXB-204ENST00000479795 TIAM1Q13009 1591 aa25.49■■□□□ 1.67
TNXB-204ENST00000479795 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
TNXB-204ENST00000479795 ABCA10Q8WWZ4 1543 aa25.46■■□□□ 1.67
TNXB-204ENST00000479795 FHOD3Q2V2M9 1422 aa25.44■■□□□ 1.66
TNXB-204ENST00000479795 LRRC9Q6ZRR7 1453 aa25.43■■□□□ 1.66
TNXB-204ENST00000479795 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
TNXB-204ENST00000479795 FAM50AQ14320 339 aaKnown RBP25.41■■□□□ 1.66
TNXB-204ENST00000479795 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
TNXB-204ENST00000479795 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.65
TNXB-204ENST00000479795 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
TNXB-204ENST00000479795 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
TNXB-204ENST00000479795 RAB3GAP2Q9H2M9 1393 aa25.37■■□□□ 1.65
TNXB-204ENST00000479795 MAP3K1Q13233 1512 aa25.37■■□□□ 1.65
TNXB-204ENST00000479795 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
TNXB-204ENST00000479795 CUL7Q14999 1698 aa25.27■■□□□ 1.64
TNXB-204ENST00000479795 CFAP43Q8NDM7 1665 aa25.25■■□□□ 1.63
TNXB-204ENST00000479795 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
TNXB-204ENST00000479795 CTTNBP2Q8WZ74 1663 aa25.22■■□□□ 1.63
TNXB-204ENST00000479795 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
TNXB-204ENST00000479795 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
TNXB-204ENST00000479795 CASKIN1Q8WXD9 1431 aa25.21■■□□□ 1.63
TNXB-204ENST00000479795 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
TNXB-204ENST00000479795 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
TNXB-204ENST00000479795 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
TNXB-204ENST00000479795 MAPKBP1O60336 1514 aa25.19■■□□□ 1.62
TNXB-204ENST00000479795 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
TNXB-204ENST00000479795 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.62
TNXB-204ENST00000479795 FMN1Q68DA7 1419 aa25.14■■□□□ 1.61
TNXB-204ENST00000479795 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
TNXB-204ENST00000479795 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.61
TNXB-204ENST00000479795 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
TNXB-204ENST00000479795 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
TNXB-204ENST00000479795 ARID3CA6NKF2 412 aa25.03■■□□□ 1.6
TNXB-204ENST00000479795 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
TNXB-204ENST00000479795 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
TNXB-204ENST00000479795 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
TNXB-204ENST00000479795 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
TNXB-204ENST00000479795 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
TNXB-204ENST00000479795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
TNXB-204ENST00000479795 PTPRKQ15262 1439 aa24.94■■□□□ 1.58
TNXB-204ENST00000479795 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
TNXB-204ENST00000479795 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
TNXB-204ENST00000479795 BCL11AQ9H165 835 aa24.87■■□□□ 1.57
TNXB-204ENST00000479795 MYOM3Q5VTT5 1437 aa24.87■■□□□ 1.57
TNXB-204ENST00000479795 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
TNXB-204ENST00000479795 DDX10Q13206 875 aaKnown RBP24.85■■□□□ 1.57
TNXB-204ENST00000479795 KCNH8Q96L42 1107 aa24.85■■□□□ 1.57
TNXB-204ENST00000479795 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
TNXB-204ENST00000479795 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
TNXB-204ENST00000479795 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
TNXB-204ENST00000479795 PPP1R15AO75807 674 aaPredicted RBP24.82■■□□□ 1.56
TNXB-204ENST00000479795 SUPT6HQ7KZ85 1726 aaKnown RBP24.81■■□□□ 1.56
TNXB-204ENST00000479795 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
TNXB-204ENST00000479795 HFM1A2PYH4 1435 aa24.8■■□□□ 1.56
TNXB-204ENST00000479795 RRP7BPQ9NSQ0 103 aa24.8■■□□□ 1.56
TNXB-204ENST00000479795 EHBP1L1Q8N3D4 1523 aa24.8■■□□□ 1.56
TNXB-204ENST00000479795 IQGAP2Q13576 1575 aa24.79■■□□□ 1.56
TNXB-204ENST00000479795 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
TNXB-204ENST00000479795 NAIPQ13075 1403 aa24.78■■□□□ 1.56
TNXB-204ENST00000479795 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
TNXB-204ENST00000479795 PTPN23Q9H3S7 1636 aa24.78■■□□□ 1.56
TNXB-204ENST00000479795 TIMELESSQ9UNS1 1208 aa24.77■■□□□ 1.56
TNXB-204ENST00000479795 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
TNXB-204ENST00000479795 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
TNXB-204ENST00000479795 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
TNXB-204ENST00000479795 CDK13Q14004 1512 aaKnown RBP24.75■■□□□ 1.55
TNXB-204ENST00000479795 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
TNXB-204ENST00000479795 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
TNXB-204ENST00000479795 HECW1Q76N89 1606 aa24.7■■□□□ 1.54
TNXB-204ENST00000479795 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
TNXB-204ENST00000479795 ANP32EQ9BTT0 268 aa24.68■■□□□ 1.54
TNXB-204ENST00000479795 TRIM52Q96A61 297 aa24.67■■□□□ 1.54
TNXB-204ENST00000479795 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
TNXB-204ENST00000479795 WDR62O43379 1518 aa24.62■■□□□ 1.53
TNXB-204ENST00000479795 TCOF1Q13428 1488 aaKnown RBP24.59■■□□□ 1.53
TNXB-204ENST00000479795 FBLN2P98095 1184 aa24.57■■□□□ 1.52
TNXB-204ENST00000479795 KDM6BO15054 1643 aa24.56■■□□□ 1.52
TNXB-204ENST00000479795 FOXD1Q16676 465 aa24.55■■□□□ 1.52
TNXB-204ENST00000479795 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
TNXB-204ENST00000479795 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
TNXB-204ENST00000479795 KIAA0586Q9BVV6 1533 aa24.55■■□□□ 1.52
TNXB-204ENST00000479795 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
TNXB-204ENST00000479795 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
TNXB-204ENST00000479795 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
TNXB-204ENST00000479795 KIAA0556O60303 1618 aa24.51■■□□□ 1.51
TNXB-204ENST00000479795 MIA2Q96PC5 1412 aa24.51■■□□□ 1.51
TNXB-204ENST00000479795 DENND4BO75064 1496 aaPredicted RBP24.51■■□□□ 1.51
TNXB-204ENST00000479795 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
TNXB-204ENST00000479795 ANP32CO43423 234 aa24.5■■□□□ 1.51
TNXB-204ENST00000479795 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
TNXB-204ENST00000479795 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
TNXB-204ENST00000479795 TSHZ2Q9NRE2 1034 aa24.49■■□□□ 1.51
TNXB-204ENST00000479795 NUP153P49790 1475 aaKnown RBP24.49■■□□□ 1.51
TNXB-204ENST00000479795 GCC2Q8IWJ2 1684 aa24.48■■□□□ 1.51
TNXB-204ENST00000479795 KDM5BQ9UGL1 1544 aa24.46■■□□□ 1.51
TNXB-204ENST00000479795 DAPK1P53355 1430 aa24.42■■□□□ 1.5
TNXB-204ENST00000479795 CDK11AQ9UQ88 783 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms