RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 FBLN2P98095 1184 aa22.81■■□□□ 1.24
RPP40-205ENST00000479782 NUP160Q12769 1436 aa22.79■■□□□ 1.24
RPP40-205ENST00000479782 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
RPP40-205ENST00000479782 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
RPP40-205ENST00000479782 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
RPP40-205ENST00000479782 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
RPP40-205ENST00000479782 CLIP1P30622 1438 aa22.72■■□□□ 1.23
RPP40-205ENST00000479782 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
RPP40-205ENST00000479782 UGGT2Q9NYU1 1516 aa22.65■■□□□ 1.22
RPP40-205ENST00000479782 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
RPP40-205ENST00000479782 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
RPP40-205ENST00000479782 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
RPP40-205ENST00000479782 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
RPP40-205ENST00000479782 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
RPP40-205ENST00000479782 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
RPP40-205ENST00000479782 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
RPP40-205ENST00000479782 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
RPP40-205ENST00000479782 KIAA0556O60303 1618 aa22.53■■□□□ 1.2
RPP40-205ENST00000479782 DISP1Q96F81 1524 aa22.52■■□□□ 1.19
RPP40-205ENST00000479782 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
RPP40-205ENST00000479782 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
RPP40-205ENST00000479782 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
RPP40-205ENST00000479782 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
RPP40-205ENST00000479782 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
RPP40-205ENST00000479782 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
RPP40-205ENST00000479782 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
RPP40-205ENST00000479782 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.16
RPP40-205ENST00000479782 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
RPP40-205ENST00000479782 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
RPP40-205ENST00000479782 PTPRGP23470 1445 aa22.27■■□□□ 1.16
RPP40-205ENST00000479782 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
RPP40-205ENST00000479782 RAPGEF6Q8TEU7 1601 aa22.26■■□□□ 1.15
RPP40-205ENST00000479782 ABCA8O94911 1581 aa22.22■■□□□ 1.15
RPP40-205ENST00000479782 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
RPP40-205ENST00000479782 APLP2Q06481 763 aa22.21■■□□□ 1.15
RPP40-205ENST00000479782 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
RPP40-205ENST00000479782 PLB1Q6P1J6 1458 aa22.19■■□□□ 1.14
RPP40-205ENST00000479782 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
RPP40-205ENST00000479782 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
RPP40-205ENST00000479782 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
RPP40-205ENST00000479782 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
RPP40-205ENST00000479782 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
RPP40-205ENST00000479782 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
RPP40-205ENST00000479782 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
RPP40-205ENST00000479782 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
RPP40-205ENST00000479782 EPRSP07814 1512 aaKnown RBP22.14■■□□□ 1.13
RPP40-205ENST00000479782 ABCC2Q92887 1545 aa22.13■■□□□ 1.13
RPP40-205ENST00000479782 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
RPP40-205ENST00000479782 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
RPP40-205ENST00000479782 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
RPP40-205ENST00000479782 UHRF1BP1LA0JNW5 1464 aa22.12■■□□□ 1.13
RPP40-205ENST00000479782 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
RPP40-205ENST00000479782 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
RPP40-205ENST00000479782 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
RPP40-205ENST00000479782 ATP10BO94823 1461 aa22.02■■□□□ 1.12
RPP40-205ENST00000479782 EHBP1L1Q8N3D4 1523 aa22.01■■□□□ 1.11
RPP40-205ENST00000479782 KDM5BQ9UGL1 1544 aa22.01■■□□□ 1.11
RPP40-205ENST00000479782 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
RPP40-205ENST00000479782 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
RPP40-205ENST00000479782 ZCCHC11Q5TAX3 1644 aaKnown RBP21.98■■□□□ 1.11
RPP40-205ENST00000479782 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
RPP40-205ENST00000479782 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
RPP40-205ENST00000479782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
RPP40-205ENST00000479782 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
RPP40-205ENST00000479782 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
RPP40-205ENST00000479782 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
RPP40-205ENST00000479782 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
RPP40-205ENST00000479782 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
RPP40-205ENST00000479782 PLEKHD1A6NEE1 506 aa21.89■■□□□ 1.09
RPP40-205ENST00000479782 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.09
RPP40-205ENST00000479782 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
RPP40-205ENST00000479782 KIF14Q15058 1648 aa21.84■■□□□ 1.09
RPP40-205ENST00000479782 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
RPP40-205ENST00000479782 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
RPP40-205ENST00000479782 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
RPP40-205ENST00000479782 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
RPP40-205ENST00000479782 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
RPP40-205ENST00000479782 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
RPP40-205ENST00000479782 PHLDB1Q86UU1 1377 aa21.77■■□□□ 1.08
RPP40-205ENST00000479782 MYOM3Q5VTT5 1437 aa21.75■■□□□ 1.07
RPP40-205ENST00000479782 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
RPP40-205ENST00000479782 ABCC10Q5T3U5 1492 aa21.74■■□□□ 1.07
RPP40-205ENST00000479782 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
RPP40-205ENST00000479782 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
RPP40-205ENST00000479782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
RPP40-205ENST00000479782 FGD6Q6ZV73 1430 aa21.7■■□□□ 1.06
RPP40-205ENST00000479782 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
RPP40-205ENST00000479782 TTC37Q6PGP7 1564 aa21.69■■□□□ 1.06
RPP40-205ENST00000479782 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
RPP40-205ENST00000479782 ABCA9Q8IUA7 1624 aa21.67■■□□□ 1.06
RPP40-205ENST00000479782 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
RPP40-205ENST00000479782 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
RPP40-205ENST00000479782 PREX2Q70Z35 1606 aa21.66■■□□□ 1.06
RPP40-205ENST00000479782 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
RPP40-205ENST00000479782 PTPN23Q9H3S7 1636 aa21.64■■□□□ 1.05
RPP40-205ENST00000479782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■■■■ 124.2
RPP40-205ENST00000479782 TCOF1Q13428 1488 aaKnown RBP21.62■■□□□ 1.05
RPP40-205ENST00000479782 CDC42BPBQ9Y5S2 1711 aa21.61■■□□□ 1.05
RPP40-205ENST00000479782 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
RPP40-205ENST00000479782 GLI2P10070 1586 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms