RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
TM9SF4-206ENST00000479591 EFCAB5A4FU69 1503 aa18.95■□□□□ 0.62
TM9SF4-206ENST00000479591 IQGAP2Q13576 1575 aa18.95■□□□□ 0.62
TM9SF4-206ENST00000479591 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
TM9SF4-206ENST00000479591 NUP160Q12769 1436 aa18.93■□□□□ 0.62
TM9SF4-206ENST00000479591 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
TM9SF4-206ENST00000479591 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
TM9SF4-206ENST00000479591 FBLN2P98095 1184 aa18.93■□□□□ 0.62
TM9SF4-206ENST00000479591 CHD1O14646 1710 aa18.93■□□□□ 0.62
TM9SF4-206ENST00000479591 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
TM9SF4-206ENST00000479591 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
TM9SF4-206ENST00000479591 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
TM9SF4-206ENST00000479591 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
TM9SF4-206ENST00000479591 UGGT2Q9NYU1 1516 aa18.87■□□□□ 0.61
TM9SF4-206ENST00000479591 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
TM9SF4-206ENST00000479591 KIAA0556O60303 1618 aa18.76■□□□□ 0.59
TM9SF4-206ENST00000479591 FMN1Q68DA7 1419 aa18.75■□□□□ 0.59
TM9SF4-206ENST00000479591 P3H3Q8IVL6 736 aa18.75■□□□□ 0.59
TM9SF4-206ENST00000479591 DISP1Q96F81 1524 aa18.74■□□□□ 0.59
TM9SF4-206ENST00000479591 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
TM9SF4-206ENST00000479591 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
TM9SF4-206ENST00000479591 CARMIL2Q6F5E8 1435 aa18.73■□□□□ 0.59
TM9SF4-206ENST00000479591 SHROOM2Q13796 1616 aa18.72■□□□□ 0.59
TM9SF4-206ENST00000479591 APLP2Q06481 763 aa18.68■□□□□ 0.58
TM9SF4-206ENST00000479591 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
TM9SF4-206ENST00000479591 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
TM9SF4-206ENST00000479591 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
TM9SF4-206ENST00000479591 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
TM9SF4-206ENST00000479591 PRG4Q92954 1404 aaPredicted RBP18.65■□□□□ 0.58
TM9SF4-206ENST00000479591 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
TM9SF4-206ENST00000479591 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
TM9SF4-206ENST00000479591 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
TM9SF4-206ENST00000479591 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.57
TM9SF4-206ENST00000479591 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
TM9SF4-206ENST00000479591 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
TM9SF4-206ENST00000479591 CCDC18Q5T9S5 1454 aa18.54■□□□□ 0.56
TM9SF4-206ENST00000479591 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
TM9SF4-206ENST00000479591 PTPRGP23470 1445 aa18.52■□□□□ 0.56
TM9SF4-206ENST00000479591 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
TM9SF4-206ENST00000479591 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
TM9SF4-206ENST00000479591 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
TM9SF4-206ENST00000479591 ABCA8O94911 1581 aa18.5■□□□□ 0.55
TM9SF4-206ENST00000479591 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
TM9SF4-206ENST00000479591 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
TM9SF4-206ENST00000479591 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
TM9SF4-206ENST00000479591 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
TM9SF4-206ENST00000479591 PLB1Q6P1J6 1458 aa18.48■□□□□ 0.55
TM9SF4-206ENST00000479591 NUP153P49790 1475 aaKnown RBP18.47■□□□□ 0.55
TM9SF4-206ENST00000479591 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
TM9SF4-206ENST00000479591 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
TM9SF4-206ENST00000479591 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
TM9SF4-206ENST00000479591 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
TM9SF4-206ENST00000479591 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
TM9SF4-206ENST00000479591 ABCC2Q92887 1545 aa18.39■□□□□ 0.54
TM9SF4-206ENST00000479591 UHRF1BP1LA0JNW5 1464 aa18.38■□□□□ 0.53
TM9SF4-206ENST00000479591 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
TM9SF4-206ENST00000479591 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
TM9SF4-206ENST00000479591 PCGF6Q9BYE7 350 aa18.35■□□□□ 0.53
TM9SF4-206ENST00000479591 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
TM9SF4-206ENST00000479591 ATP10BO94823 1461 aa18.34■□□□□ 0.53
TM9SF4-206ENST00000479591 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
TM9SF4-206ENST00000479591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
TM9SF4-206ENST00000479591 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
TM9SF4-206ENST00000479591 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
TM9SF4-206ENST00000479591 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
TM9SF4-206ENST00000479591 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
TM9SF4-206ENST00000479591 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
TM9SF4-206ENST00000479591 KDM5BQ9UGL1 1544 aa18.28■□□□□ 0.52
TM9SF4-206ENST00000479591 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
TM9SF4-206ENST00000479591 PHLDB1Q86UU1 1377 aa18.27■□□□□ 0.51
TM9SF4-206ENST00000479591 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
TM9SF4-206ENST00000479591 ZCCHC11Q5TAX3 1644 aaKnown RBP18.26■□□□□ 0.51
TM9SF4-206ENST00000479591 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
TM9SF4-206ENST00000479591 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
TM9SF4-206ENST00000479591 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
TM9SF4-206ENST00000479591 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
TM9SF4-206ENST00000479591 KIF14Q15058 1648 aa18.22■□□□□ 0.51
TM9SF4-206ENST00000479591 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
TM9SF4-206ENST00000479591 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
TM9SF4-206ENST00000479591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.18■□□□□ 0.5
TM9SF4-206ENST00000479591 ITSN2Q9NZM3 1697 aa18.17■□□□□ 0.5
TM9SF4-206ENST00000479591 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
TM9SF4-206ENST00000479591 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
TM9SF4-206ENST00000479591 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.49
TM9SF4-206ENST00000479591 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
TM9SF4-206ENST00000479591 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
TM9SF4-206ENST00000479591 WDR7Q9Y4E6 1490 aa18.11■□□□□ 0.49
TM9SF4-206ENST00000479591 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
TM9SF4-206ENST00000479591 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
TM9SF4-206ENST00000479591 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
TM9SF4-206ENST00000479591 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
TM9SF4-206ENST00000479591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.08■□□□□ 0.48
TM9SF4-206ENST00000479591 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
TM9SF4-206ENST00000479591 PREX2Q70Z35 1606 aa18.05■□□□□ 0.48
TM9SF4-206ENST00000479591 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
TM9SF4-206ENST00000479591 MYO5CQ9NQX4 1742 aa18.04■□□□□ 0.48
TM9SF4-206ENST00000479591 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
TM9SF4-206ENST00000479591 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
TM9SF4-206ENST00000479591 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
TM9SF4-206ENST00000479591 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms