RNA–Protein interactions for RNA: ENST00000479575.1

ITSN2-212, Transcript of intersectin 2, humanhuman

TSL 5

Gene ITSN2, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-212ENST00000479575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
ITSN2-212ENST00000479575 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
ITSN2-212ENST00000479575 DNMBPQ6XZF7 1577 aa13.39□□□□□ -0.27
ITSN2-212ENST00000479575 CCER1Q8TC90 406 aaPredicted RBP13.38□□□□□ -0.27
ITSN2-212ENST00000479575 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
ITSN2-212ENST00000479575 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
ITSN2-212ENST00000479575 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
ITSN2-212ENST00000479575 CUX2O14529 1486 aa13.36□□□□□ -0.27
ITSN2-212ENST00000479575 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
ITSN2-212ENST00000479575 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
ITSN2-212ENST00000479575 CUL7Q14999 1698 aa13.31□□□□□ -0.28
ITSN2-212ENST00000479575 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
ITSN2-212ENST00000479575 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
ITSN2-212ENST00000479575 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
ITSN2-212ENST00000479575 APLP2Q06481 763 aa13.29□□□□□ -0.28
ITSN2-212ENST00000479575 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
ITSN2-212ENST00000479575 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
ITSN2-212ENST00000479575 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
ITSN2-212ENST00000479575 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
ITSN2-212ENST00000479575 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
ITSN2-212ENST00000479575 IGF1RP08069 1367 aa13.24□□□□□ -0.29
ITSN2-212ENST00000479575 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
ITSN2-212ENST00000479575 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
ITSN2-212ENST00000479575 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
ITSN2-212ENST00000479575 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
ITSN2-212ENST00000479575 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
ITSN2-212ENST00000479575 NESP48681 1621 aa13.21□□□□□ -0.29
ITSN2-212ENST00000479575 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
ITSN2-212ENST00000479575 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
ITSN2-212ENST00000479575 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
ITSN2-212ENST00000479575 RANGAP1P46060 587 aaPredicted RBP13.18□□□□□ -0.3
ITSN2-212ENST00000479575 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
ITSN2-212ENST00000479575 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
ITSN2-212ENST00000479575 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
ITSN2-212ENST00000479575 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
ITSN2-212ENST00000479575 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
ITSN2-212ENST00000479575 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
ITSN2-212ENST00000479575 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
ITSN2-212ENST00000479575 FYCO1Q9BQS8 1478 aa13.11□□□□□ -0.31
ITSN2-212ENST00000479575 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
ITSN2-212ENST00000479575 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
ITSN2-212ENST00000479575 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
ITSN2-212ENST00000479575 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
ITSN2-212ENST00000479575 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
ITSN2-212ENST00000479575 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
ITSN2-212ENST00000479575 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
ITSN2-212ENST00000479575 DHX57Q6P158 1386 aaKnown RBP13.08□□□□□ -0.31
ITSN2-212ENST00000479575 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.32
ITSN2-212ENST00000479575 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
ITSN2-212ENST00000479575 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
ITSN2-212ENST00000479575 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
ITSN2-212ENST00000479575 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
ITSN2-212ENST00000479575 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
ITSN2-212ENST00000479575 KCNA4P22459 653 aa13.04□□□□□ -0.32
ITSN2-212ENST00000479575 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
ITSN2-212ENST00000479575 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
ITSN2-212ENST00000479575 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
ITSN2-212ENST00000479575 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
ITSN2-212ENST00000479575 POLA2Q14181 598 aa13.01□□□□□ -0.33
ITSN2-212ENST00000479575 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
ITSN2-212ENST00000479575 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
ITSN2-212ENST00000479575 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
ITSN2-212ENST00000479575 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
ITSN2-212ENST00000479575 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
ITSN2-212ENST00000479575 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
ITSN2-212ENST00000479575 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
ITSN2-212ENST00000479575 HECW1Q76N89 1606 aa12.94□□□□□ -0.34
ITSN2-212ENST00000479575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
ITSN2-212ENST00000479575 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
ITSN2-212ENST00000479575 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
ITSN2-212ENST00000479575 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
ITSN2-212ENST00000479575 WDR62O43379 1518 aa12.93□□□□□ -0.34
ITSN2-212ENST00000479575 SETD5Q9C0A6 1442 aa12.92□□□□□ -0.34
ITSN2-212ENST00000479575 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
ITSN2-212ENST00000479575 CCDC18Q5T9S5 1454 aa12.89□□□□□ -0.35
ITSN2-212ENST00000479575 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
ITSN2-212ENST00000479575 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
ITSN2-212ENST00000479575 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
ITSN2-212ENST00000479575 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
ITSN2-212ENST00000479575 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
ITSN2-212ENST00000479575 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
ITSN2-212ENST00000479575 PTPN23Q9H3S7 1636 aa12.86□□□□□ -0.35
ITSN2-212ENST00000479575 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
ITSN2-212ENST00000479575 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
ITSN2-212ENST00000479575 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
ITSN2-212ENST00000479575 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
ITSN2-212ENST00000479575 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
ITSN2-212ENST00000479575 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
ITSN2-212ENST00000479575 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
ITSN2-212ENST00000479575 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
ITSN2-212ENST00000479575 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
ITSN2-212ENST00000479575 ITGAEP38570 1179 aa12.82□□□□□ -0.36
ITSN2-212ENST00000479575 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
ITSN2-212ENST00000479575 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
ITSN2-212ENST00000479575 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
ITSN2-212ENST00000479575 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
ITSN2-212ENST00000479575 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
ITSN2-212ENST00000479575 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
ITSN2-212ENST00000479575 MIER1Q8N108 512 aa12.77□□□□□ -0.37
ITSN2-212ENST00000479575 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms