RNA–Protein interactions for RNA: ENST00000479351.5

CNTNAP3B-206, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 2,426 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-206ENST00000479351 DHX57Q6P158 1386 aaKnown RBP31.63■■■□□ 2.65
CNTNAP3B-206ENST00000479351 PCF11O94913 1555 aaKnown RBP31.63■■■□□ 2.65
CNTNAP3B-206ENST00000479351 KIF21AQ7Z4S6 1674 aa31.63■■■□□ 2.65
CNTNAP3B-206ENST00000479351 CUL7Q14999 1698 aa31.59■■■□□ 2.65
CNTNAP3B-206ENST00000479351 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
CNTNAP3B-206ENST00000479351 LRRC9Q6ZRR7 1453 aa31.56■■■□□ 2.64
CNTNAP3B-206ENST00000479351 CTTNBP2Q8WZ74 1663 aa31.52■■■□□ 2.64
CNTNAP3B-206ENST00000479351 PHLDB1Q86UU1 1377 aa31.52■■■□□ 2.64
CNTNAP3B-206ENST00000479351 ABCA5Q8WWZ7 1642 aa31.51■■■□□ 2.64
CNTNAP3B-206ENST00000479351 FHAD1B1AJZ9 1412 aa31.51■■■□□ 2.63
CNTNAP3B-206ENST00000479351 MAP3K1Q13233 1512 aa31.5■■■□□ 2.63
CNTNAP3B-206ENST00000479351 SCAF1Q9H7N4 1312 aaKnown RBP31.5■■■□□ 2.63
CNTNAP3B-206ENST00000479351 GAPVD1Q14C86 1478 aa31.48■■■□□ 2.63
CNTNAP3B-206ENST00000479351 CFAP43Q8NDM7 1665 aa31.47■■■□□ 2.63
CNTNAP3B-206ENST00000479351 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
CNTNAP3B-206ENST00000479351 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
CNTNAP3B-206ENST00000479351 FYCO1Q9BQS8 1478 aa31.36■■■□□ 2.61
CNTNAP3B-206ENST00000479351 NEUROD1Q13562 356 aa31.36■■■□□ 2.61
CNTNAP3B-206ENST00000479351 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
CNTNAP3B-206ENST00000479351 CASKIN1Q8WXD9 1431 aa31.35■■■□□ 2.61
CNTNAP3B-206ENST00000479351 RAB3GAP2Q9H2M9 1393 aa31.35■■■□□ 2.61
CNTNAP3B-206ENST00000479351 CLSPNQ9HAW4 1339 aa31.33■■■□□ 2.61
CNTNAP3B-206ENST00000479351 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
CNTNAP3B-206ENST00000479351 ACIN1Q9UKV3 1341 aaKnown RBP31.27■■■□□ 2.6
CNTNAP3B-206ENST00000479351 MIER1Q8N108 512 aa31.26■■■□□ 2.6
CNTNAP3B-206ENST00000479351 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.59
CNTNAP3B-206ENST00000479351 SAMD9Q5K651 1589 aa31.25■■■□□ 2.59
CNTNAP3B-206ENST00000479351 FMN1Q68DA7 1419 aa31.23■■■□□ 2.59
CNTNAP3B-206ENST00000479351 LRRIQ1Q96JM4 1722 aa31.22■■■□□ 2.59
CNTNAP3B-206ENST00000479351 SETD5Q9C0A6 1442 aa31.19■■■□□ 2.58
CNTNAP3B-206ENST00000479351 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
CNTNAP3B-206ENST00000479351 MAPKBP1O60336 1514 aa31.18■■■□□ 2.58
CNTNAP3B-206ENST00000479351 YTHDC1Q96MU7 727 aaKnown RBP31.17■■■□□ 2.58
CNTNAP3B-206ENST00000479351 MRC2Q9UBG0 1479 aa31.15■■■□□ 2.58
CNTNAP3B-206ENST00000479351 MTUS2Q5JR59 1369 aa31.1■■■□□ 2.57
CNTNAP3B-206ENST00000479351 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
CNTNAP3B-206ENST00000479351 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
CNTNAP3B-206ENST00000479351 CENPBP07199 599 aaPredicted RBP31.06■■■□□ 2.56
CNTNAP3B-206ENST00000479351 FGD6Q6ZV73 1430 aa31.05■■■□□ 2.56
CNTNAP3B-206ENST00000479351 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
CNTNAP3B-206ENST00000479351 SIN3AQ96ST3 1273 aa31.02■■■□□ 2.56
CNTNAP3B-206ENST00000479351 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
CNTNAP3B-206ENST00000479351 NCOA2Q15596 1464 aa30.98■■■□□ 2.55
CNTNAP3B-206ENST00000479351 MAGI3Q5TCQ9 1506 aa30.98■■■□□ 2.55
CNTNAP3B-206ENST00000479351 IQGAP2Q13576 1575 aa30.97■■■□□ 2.55
CNTNAP3B-206ENST00000479351 PTPRKQ15262 1439 aa30.96■■■□□ 2.55
CNTNAP3B-206ENST00000479351 GTF3C3Q9Y5Q9 886 aa30.95■■■□□ 2.54
CNTNAP3B-206ENST00000479351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.91■■■□□ 2.54
CNTNAP3B-206ENST00000479351 WDR62O43379 1518 aa30.9■■■□□ 2.54
CNTNAP3B-206ENST00000479351 THOC2Q8NI27 1593 aaKnown RBP30.89■■■□□ 2.54
CNTNAP3B-206ENST00000479351 IFT140Q96RY7 1462 aa30.88■■■□□ 2.53
CNTNAP3B-206ENST00000479351 MYOM3Q5VTT5 1437 aa30.87■■■□□ 2.53
CNTNAP3B-206ENST00000479351 SUPT6HQ7KZ85 1726 aaKnown RBP30.87■■■□□ 2.53
CNTNAP3B-206ENST00000479351 EHBP1L1Q8N3D4 1523 aa30.87■■■□□ 2.53
CNTNAP3B-206ENST00000479351 CDK13Q14004 1512 aaKnown RBP30.85■■■□□ 2.53
CNTNAP3B-206ENST00000479351 UGGT2Q9NYU1 1516 aa30.81■■■□□ 2.52
CNTNAP3B-206ENST00000479351 HECW1Q76N89 1606 aa30.8■■■□□ 2.52
CNTNAP3B-206ENST00000479351 CCDC18Q5T9S5 1454 aa30.79■■■□□ 2.52
CNTNAP3B-206ENST00000479351 EPRSP07814 1512 aaKnown RBP30.79■■■□□ 2.52
CNTNAP3B-206ENST00000479351 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
CNTNAP3B-206ENST00000479351 ERCC6Q03468 1493 aa30.78■■■□□ 2.52
CNTNAP3B-206ENST00000479351 PTPN23Q9H3S7 1636 aa30.77■■■□□ 2.52
CNTNAP3B-206ENST00000479351 ARHGEF11O15085 1522 aa30.76■■■□□ 2.52
CNTNAP3B-206ENST00000479351 HFM1A2PYH4 1435 aa30.74■■■□□ 2.51
CNTNAP3B-206ENST00000479351 CHIC2Q9UKJ5 165 aa30.72■■■□□ 2.51
CNTNAP3B-206ENST00000479351 NAIPQ13075 1403 aa30.71■■■□□ 2.51
CNTNAP3B-206ENST00000479351 DISP1Q96F81 1524 aa30.7■■■□□ 2.5
CNTNAP3B-206ENST00000479351 RRP7BPQ9NSQ0 103 aa30.68■■■□□ 2.5
CNTNAP3B-206ENST00000479351 GRIN2AQ12879 1464 aa30.68■■■□□ 2.5
CNTNAP3B-206ENST00000479351 KIAA0556O60303 1618 aa30.66■■■□□ 2.5
CNTNAP3B-206ENST00000479351 KIAA0586Q9BVV6 1533 aa30.66■■■□□ 2.5
CNTNAP3B-206ENST00000479351 HIRIP3Q9BW71 556 aaPredicted RBP30.65■■■□□ 2.5
CNTNAP3B-206ENST00000479351 UACAQ9BZF9 1416 aa30.62■■■□□ 2.49
CNTNAP3B-206ENST00000479351 FBLN2P98095 1184 aa30.61■■■□□ 2.49
CNTNAP3B-206ENST00000479351 TCOF1Q13428 1488 aaKnown RBP30.58■■■□□ 2.49
CNTNAP3B-206ENST00000479351 PPP1R15AO75807 674 aaPredicted RBP30.56■■■□□ 2.48
CNTNAP3B-206ENST00000479351 KDM6BO15054 1643 aa30.56■■■□□ 2.48
CNTNAP3B-206ENST00000479351 NUP153P49790 1475 aaKnown RBP30.56■■■□□ 2.48
CNTNAP3B-206ENST00000479351 CHMP7Q8WUX9 453 aaPredicted RBP30.55■■■□□ 2.48
CNTNAP3B-206ENST00000479351 CEP170Q5SW79 1584 aa30.55■■■□□ 2.48
CNTNAP3B-206ENST00000479351 KCNH8Q96L42 1107 aa30.5■■■□□ 2.47
CNTNAP3B-206ENST00000479351 TONSLQ96HA7 1378 aa30.5■■■□□ 2.47
CNTNAP3B-206ENST00000479351 RAPGEF6Q8TEU7 1601 aa30.49■■■□□ 2.47
CNTNAP3B-206ENST00000479351 DDX10Q13206 875 aaKnown RBP30.49■■■□□ 2.47
CNTNAP3B-206ENST00000479351 ZNF644Q9H582 1327 aaPredicted RBP30.48■■■□□ 2.47
CNTNAP3B-206ENST00000479351 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
CNTNAP3B-206ENST00000479351 TIMELESSQ9UNS1 1208 aa30.47■■■□□ 2.47
CNTNAP3B-206ENST00000479351 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
CNTNAP3B-206ENST00000479351 GCC2Q8IWJ2 1684 aa30.45■■■□□ 2.47
CNTNAP3B-206ENST00000479351 TRIM52Q96A61 297 aa30.44■■■□□ 2.46
CNTNAP3B-206ENST00000479351 MIA2Q96PC5 1412 aa30.44■■■□□ 2.46
CNTNAP3B-206ENST00000479351 DENND4BO75064 1496 aaPredicted RBP30.44■■■□□ 2.46
CNTNAP3B-206ENST00000479351 PLB1Q6P1J6 1458 aa30.44■■■□□ 2.46
CNTNAP3B-206ENST00000479351 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
CNTNAP3B-206ENST00000479351 FOXD1Q16676 465 aa30.37■■■□□ 2.45
CNTNAP3B-206ENST00000479351 KDM5BQ9UGL1 1544 aa30.35■■■□□ 2.45
CNTNAP3B-206ENST00000479351 DAPK1P53355 1430 aa30.34■■■□□ 2.45
CNTNAP3B-206ENST00000479351 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
CNTNAP3B-206ENST00000479351 ABCC5O15440 1437 aa30.31■■■□□ 2.44
CNTNAP3B-206ENST00000479351 AKNAQ7Z591 1439 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms