RNA–Protein interactions for RNA: ENST00000478973.6

STRBP-206, Transcript of spermatid perinuclear RNA binding protein, humanhuman

TSL 5

Gene STRBP, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRBP-206ENST00000478973 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
STRBP-206ENST00000478973 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
STRBP-206ENST00000478973 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
STRBP-206ENST00000478973 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
STRBP-206ENST00000478973 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
STRBP-206ENST00000478973 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
STRBP-206ENST00000478973 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
STRBP-206ENST00000478973 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.37
STRBP-206ENST00000478973 ADAMTS12P58397 1594 aa12.71□□□□□ -0.37
STRBP-206ENST00000478973 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
STRBP-206ENST00000478973 FHAD1B1AJZ9 1412 aa12.7□□□□□ -0.38
STRBP-206ENST00000478973 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
STRBP-206ENST00000478973 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
STRBP-206ENST00000478973 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
STRBP-206ENST00000478973 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
STRBP-206ENST00000478973 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
STRBP-206ENST00000478973 CLIP1P30622 1438 aa12.61□□□□□ -0.39
STRBP-206ENST00000478973 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
STRBP-206ENST00000478973 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
STRBP-206ENST00000478973 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
STRBP-206ENST00000478973 CHD1O14646 1710 aa12.58□□□□□ -0.4
STRBP-206ENST00000478973 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
STRBP-206ENST00000478973 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
STRBP-206ENST00000478973 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
STRBP-206ENST00000478973 FBLN2P98095 1184 aa12.55□□□□□ -0.4
STRBP-206ENST00000478973 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
STRBP-206ENST00000478973 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
STRBP-206ENST00000478973 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
STRBP-206ENST00000478973 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
STRBP-206ENST00000478973 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
STRBP-206ENST00000478973 SAMD9Q5K651 1589 aa12.48□□□□□ -0.41
STRBP-206ENST00000478973 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
STRBP-206ENST00000478973 NUP160Q12769 1436 aa12.48□□□□□ -0.41
STRBP-206ENST00000478973 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
STRBP-206ENST00000478973 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
STRBP-206ENST00000478973 ARAP1Q96P48 1450 aa12.46□□□□□ -0.42
STRBP-206ENST00000478973 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
STRBP-206ENST00000478973 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
STRBP-206ENST00000478973 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
STRBP-206ENST00000478973 APLP2Q06481 763 aa12.44□□□□□ -0.42
STRBP-206ENST00000478973 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
STRBP-206ENST00000478973 CARMIL2Q6F5E8 1435 aa12.42□□□□□ -0.42
STRBP-206ENST00000478973 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
STRBP-206ENST00000478973 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
STRBP-206ENST00000478973 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
STRBP-206ENST00000478973 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
STRBP-206ENST00000478973 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
STRBP-206ENST00000478973 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
STRBP-206ENST00000478973 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
STRBP-206ENST00000478973 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
STRBP-206ENST00000478973 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
STRBP-206ENST00000478973 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
STRBP-206ENST00000478973 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
STRBP-206ENST00000478973 CASKIN1Q8WXD9 1431 aa12.34□□□□□ -0.43
STRBP-206ENST00000478973 CFAP43Q8NDM7 1665 aa12.33□□□□□ -0.44
STRBP-206ENST00000478973 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
STRBP-206ENST00000478973 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
STRBP-206ENST00000478973 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
STRBP-206ENST00000478973 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
STRBP-206ENST00000478973 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
STRBP-206ENST00000478973 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
STRBP-206ENST00000478973 LRRIQ1Q96JM4 1722 aa12.26□□□□□ -0.45
STRBP-206ENST00000478973 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
STRBP-206ENST00000478973 TTBK1Q5TCY1 1321 aaPredicted RBP12.25□□□□□ -0.45
STRBP-206ENST00000478973 PTPRGP23470 1445 aa12.25□□□□□ -0.45
STRBP-206ENST00000478973 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
STRBP-206ENST00000478973 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
STRBP-206ENST00000478973 ABCA8O94911 1581 aa12.22□□□□□ -0.45
STRBP-206ENST00000478973 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.45
STRBP-206ENST00000478973 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.46
STRBP-206ENST00000478973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
STRBP-206ENST00000478973 CDK11AQ9UQ88 783 aaPredicted RBP12.2□□□□□ -0.46
STRBP-206ENST00000478973 ERCC6L2Q5T890 1561 aa12.2□□□□□ -0.46
STRBP-206ENST00000478973 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
STRBP-206ENST00000478973 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
STRBP-206ENST00000478973 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
STRBP-206ENST00000478973 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
STRBP-206ENST00000478973 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
STRBP-206ENST00000478973 UACAQ9BZF9 1416 aa12.18□□□□□ -0.46
STRBP-206ENST00000478973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
STRBP-206ENST00000478973 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
STRBP-206ENST00000478973 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
STRBP-206ENST00000478973 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
STRBP-206ENST00000478973 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
STRBP-206ENST00000478973 KANK4Q5T7N3 995 aaPredicted RBP12.16□□□□□ -0.46
STRBP-206ENST00000478973 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
STRBP-206ENST00000478973 UHRF1BP1LA0JNW5 1464 aa12.14□□□□□ -0.47
STRBP-206ENST00000478973 ZCCHC11Q5TAX3 1644 aaKnown RBP12.11□□□□□ -0.47
STRBP-206ENST00000478973 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
STRBP-206ENST00000478973 ATP10BO94823 1461 aa12.1□□□□□ -0.47
STRBP-206ENST00000478973 PLEKHD1A6NEE1 506 aa12.1□□□□□ -0.47
STRBP-206ENST00000478973 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
STRBP-206ENST00000478973 KIF14Q15058 1648 aa12.1□□□□□ -0.47
STRBP-206ENST00000478973 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
STRBP-206ENST00000478973 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
STRBP-206ENST00000478973 NCOA2Q15596 1464 aa12.08□□□□□ -0.47
STRBP-206ENST00000478973 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
STRBP-206ENST00000478973 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
STRBP-206ENST00000478973 RRBP1Q9P2E9 1410 aaKnown RBP12.06□□□□□ -0.48
STRBP-206ENST00000478973 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms