RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CUX1P39880 1505 aa15.65■□□□□ 0.1
LRRFIP1-211ENST00000478958 FKBP8Q14318 412 aa15.63■□□□□ 0.09
LRRFIP1-211ENST00000478958 RBM19Q9Y4C8 960 aaKnown RBP15.63■□□□□ 0.09
LRRFIP1-211ENST00000478958 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
LRRFIP1-211ENST00000478958 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
LRRFIP1-211ENST00000478958 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
LRRFIP1-211ENST00000478958 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
LRRFIP1-211ENST00000478958 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
LRRFIP1-211ENST00000478958 EIF5BO60841 1220 aaKnown RBP15.58■□□□□ 0.08
LRRFIP1-211ENST00000478958 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
LRRFIP1-211ENST00000478958 DEKP35659 375 aaKnown RBP15.56■□□□□ 0.08
LRRFIP1-211ENST00000478958 CUX2O14529 1486 aa15.56■□□□□ 0.08
LRRFIP1-211ENST00000478958 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
LRRFIP1-211ENST00000478958 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
LRRFIP1-211ENST00000478958 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
LRRFIP1-211ENST00000478958 MSH5O43196 834 aa15.54■□□□□ 0.08
LRRFIP1-211ENST00000478958 IGF1RP08069 1367 aa15.54■□□□□ 0.08
LRRFIP1-211ENST00000478958 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
LRRFIP1-211ENST00000478958 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
LRRFIP1-211ENST00000478958 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
LRRFIP1-211ENST00000478958 NEFLP07196 543 aa15.5■□□□□ 0.07
LRRFIP1-211ENST00000478958 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
LRRFIP1-211ENST00000478958 ANP32CO43423 234 aa15.48■□□□□ 0.07
LRRFIP1-211ENST00000478958 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
LRRFIP1-211ENST00000478958 CFTRP13569 1480 aa15.47■□□□□ 0.07
LRRFIP1-211ENST00000478958 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
LRRFIP1-211ENST00000478958 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
LRRFIP1-211ENST00000478958 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
LRRFIP1-211ENST00000478958 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
LRRFIP1-211ENST00000478958 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
LRRFIP1-211ENST00000478958 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
LRRFIP1-211ENST00000478958 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
LRRFIP1-211ENST00000478958 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
LRRFIP1-211ENST00000478958 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
LRRFIP1-211ENST00000478958 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
LRRFIP1-211ENST00000478958 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
LRRFIP1-211ENST00000478958 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
LRRFIP1-211ENST00000478958 PKNOX2Q96KN3 472 aa15.34■□□□□ 0.05
LRRFIP1-211ENST00000478958 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
LRRFIP1-211ENST00000478958 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.04
LRRFIP1-211ENST00000478958 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
LRRFIP1-211ENST00000478958 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
LRRFIP1-211ENST00000478958 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
LRRFIP1-211ENST00000478958 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
LRRFIP1-211ENST00000478958 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
LRRFIP1-211ENST00000478958 DAXXQ9UER7 740 aaPredicted RBP15.28■□□□□ 0.04
LRRFIP1-211ENST00000478958 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
LRRFIP1-211ENST00000478958 RTN4Q9NQC3 1192 aaKnown RBP15.25■□□□□ 0.03
LRRFIP1-211ENST00000478958 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
LRRFIP1-211ENST00000478958 PTPRKQ15262 1439 aa15.24■□□□□ 0.03
LRRFIP1-211ENST00000478958 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
LRRFIP1-211ENST00000478958 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
LRRFIP1-211ENST00000478958 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
LRRFIP1-211ENST00000478958 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
LRRFIP1-211ENST00000478958 IL27Q8NEV9 243 aa15.22■□□□□ 0.03
LRRFIP1-211ENST00000478958 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.03
LRRFIP1-211ENST00000478958 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
LRRFIP1-211ENST00000478958 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
LRRFIP1-211ENST00000478958 FOXD1Q16676 465 aa15.19■□□□□ 0.02
LRRFIP1-211ENST00000478958 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
LRRFIP1-211ENST00000478958 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 FAM9BQ8IZU0 186 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 AQRO60306 1485 aaKnown RBP eCLIP15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 UACAQ9BZF9 1416 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 NBR1Q14596 966 aa15.18■□□□□ 0.02
LRRFIP1-211ENST00000478958 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
LRRFIP1-211ENST00000478958 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
LRRFIP1-211ENST00000478958 TDRD9Q8NDG6 1382 aaKnown RBP15.16■□□□□ 0.02
LRRFIP1-211ENST00000478958 HFM1A2PYH4 1435 aa15.16■□□□□ 0.02
LRRFIP1-211ENST00000478958 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
LRRFIP1-211ENST00000478958 NAIPQ13075 1403 aa15.15■□□□□ 0.02
LRRFIP1-211ENST00000478958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
LRRFIP1-211ENST00000478958 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
LRRFIP1-211ENST00000478958 EIF4G2P78344 907 aaKnown RBP eCLIP15.13■□□□□ 0.01
LRRFIP1-211ENST00000478958 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
LRRFIP1-211ENST00000478958 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
LRRFIP1-211ENST00000478958 NESP48681 1621 aa15.11■□□□□ 0.01
LRRFIP1-211ENST00000478958 C11orf95C9JLR9 678 aaPredicted RBP15.1■□□□□ 0.01
LRRFIP1-211ENST00000478958 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
LRRFIP1-211ENST00000478958 MRS2Q9HD23 443 aa15.1■□□□□ 0.01
LRRFIP1-211ENST00000478958 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
LRRFIP1-211ENST00000478958 PTPN23Q9H3S7 1636 aa15.09■□□□□ 0.01
LRRFIP1-211ENST00000478958 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
LRRFIP1-211ENST00000478958 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
LRRFIP1-211ENST00000478958 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
LRRFIP1-211ENST00000478958 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0
LRRFIP1-211ENST00000478958 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0
LRRFIP1-211ENST00000478958 TOPBP1Q92547 1522 aa15.08■□□□□ 0
LRRFIP1-211ENST00000478958 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
LRRFIP1-211ENST00000478958 PRDM2Q13029 1718 aa15.06■□□□□ 0
LRRFIP1-211ENST00000478958 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
LRRFIP1-211ENST00000478958 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
LRRFIP1-211ENST00000478958 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
LRRFIP1-211ENST00000478958 PPP4R2Q9NY27 417 aa15.03■□□□□ -0
LRRFIP1-211ENST00000478958 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
LRRFIP1-211ENST00000478958 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
LRRFIP1-211ENST00000478958 ZNF326Q5BKZ1 582 aaKnown RBP15.02■□□□□ -0
LRRFIP1-211ENST00000478958 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms