RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 RAPGEF2Q9Y4G8 1499 aa34.91■■■■□ 3.18
COL19A1-203ENST00000478620 JPH4Q96JJ6 628 aa34.9■■■■□ 3.18
COL19A1-203ENST00000478620 EEA1Q15075 1411 aa34.85■■■■□ 3.17
COL19A1-203ENST00000478620 KIAA0586Q9BVV6 1533 aa34.82■■■■□ 3.16
COL19A1-203ENST00000478620 PRG4Q92954 1404 aaPredicted RBP34.76■■■■□ 3.16
COL19A1-203ENST00000478620 ARAP1Q96P48 1450 aa34.76■■■■□ 3.15
COL19A1-203ENST00000478620 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
COL19A1-203ENST00000478620 SHROOM2Q13796 1616 aa34.72■■■■□ 3.15
COL19A1-203ENST00000478620 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
COL19A1-203ENST00000478620 IQGAP2Q13576 1575 aa34.61■■■■□ 3.13
COL19A1-203ENST00000478620 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
COL19A1-203ENST00000478620 CARMIL2Q6F5E8 1435 aa34.53■■■■□ 3.12
COL19A1-203ENST00000478620 TTBK1Q5TCY1 1321 aaPredicted RBP34.52■■■■□ 3.12
COL19A1-203ENST00000478620 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.11
COL19A1-203ENST00000478620 UBTFP17480 764 aaKnown RBP34.41■■■■□ 3.1
COL19A1-203ENST00000478620 UGGT2Q9NYU1 1516 aa34.4■■■■□ 3.1
COL19A1-203ENST00000478620 KIF21BO75037 1637 aa34.4■■■■□ 3.1
COL19A1-203ENST00000478620 PTPRGP23470 1445 aa34.39■■■■□ 3.1
COL19A1-203ENST00000478620 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
COL19A1-203ENST00000478620 RANGAP1P46060 587 aaPredicted RBP34.37■■■■□ 3.09
COL19A1-203ENST00000478620 DISP1Q96F81 1524 aa34.35■■■■□ 3.09
COL19A1-203ENST00000478620 GOLGA3Q08378 1498 aa34.32■■■■□ 3.08
COL19A1-203ENST00000478620 NPM1P06748 294 aaKnown RBP eCLIP34.29■■■■□ 3.08
COL19A1-203ENST00000478620 P3H3Q8IVL6 736 aa34.27■■■■□ 3.08
COL19A1-203ENST00000478620 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
COL19A1-203ENST00000478620 KIAA0556O60303 1618 aa34.24■■■■□ 3.07
COL19A1-203ENST00000478620 UACAQ9BZF9 1416 aa34.11■■■■□ 3.05
COL19A1-203ENST00000478620 ADCY10Q96PN6 1610 aa34.09■■■■□ 3.05
COL19A1-203ENST00000478620 SAMD9Q5K651 1589 aa34.01■■■■□ 3.03
COL19A1-203ENST00000478620 UHRF1BP1LA0JNW5 1464 aa34■■■■□ 3.03
COL19A1-203ENST00000478620 PLB1Q6P1J6 1458 aa33.97■■■■□ 3.03
COL19A1-203ENST00000478620 ABCC2Q92887 1545 aa33.97■■■■□ 3.03
COL19A1-203ENST00000478620 FHOD3Q2V2M9 1422 aa33.96■■■■□ 3.03
COL19A1-203ENST00000478620 EFCAB5A4FU69 1503 aa33.94■■■■□ 3.02
COL19A1-203ENST00000478620 ARID3CA6NKF2 412 aa33.87■■■■□ 3.01
COL19A1-203ENST00000478620 ABCA8O94911 1581 aa33.86■■■■□ 3.01
COL19A1-203ENST00000478620 MAPKBP1O60336 1514 aa33.85■■■■□ 3.01
COL19A1-203ENST00000478620 LOC105371045A0A1W2PR82 267 aa33.84■■■■□ 3.01
COL19A1-203ENST00000478620 FAM69CQ0P6D2 419 aa33.84■■■■□ 3.01
COL19A1-203ENST00000478620 KDM5BQ9UGL1 1544 aa33.83■■■■□ 3.01
COL19A1-203ENST00000478620 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
COL19A1-203ENST00000478620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
COL19A1-203ENST00000478620 HNRNPUL2Q1KMD3 747 aaKnown RBP33.79■■■■□ 3
COL19A1-203ENST00000478620 ASXL2Q76L83 1435 aa33.79■■■■□ 3
COL19A1-203ENST00000478620 ATP1B4Q9UN42 357 aaPredicted RBP33.77■■■■□ 3
COL19A1-203ENST00000478620 ZCCHC11Q5TAX3 1644 aaKnown RBP33.75■■■□□ 2.99
COL19A1-203ENST00000478620 ABCC10Q5T3U5 1492 aa33.75■■■□□ 2.99
COL19A1-203ENST00000478620 RAPGEF6Q8TEU7 1601 aa33.74■■■□□ 2.99
COL19A1-203ENST00000478620 CLIP1P30622 1438 aa33.72■■■□□ 2.99
COL19A1-203ENST00000478620 FMN1Q68DA7 1419 aa33.7■■■□□ 2.99
COL19A1-203ENST00000478620 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
COL19A1-203ENST00000478620 ATP10BO94823 1461 aa33.67■■■□□ 2.98
COL19A1-203ENST00000478620 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
COL19A1-203ENST00000478620 DIP2BQ9P265 1576 aa33.62■■■□□ 2.97
COL19A1-203ENST00000478620 NUP153P49790 1475 aaKnown RBP33.62■■■□□ 2.97
COL19A1-203ENST00000478620 WDR7Q9Y4E6 1490 aa33.6■■■□□ 2.97
COL19A1-203ENST00000478620 CEP162Q5TB80 1403 aa33.57■■■□□ 2.96
COL19A1-203ENST00000478620 PLEKHD1A6NEE1 506 aa33.56■■■□□ 2.96
COL19A1-203ENST00000478620 EPRSP07814 1512 aaKnown RBP33.55■■■□□ 2.96
COL19A1-203ENST00000478620 GLI2P10070 1586 aa33.48■■■□□ 2.95
COL19A1-203ENST00000478620 HECW1Q76N89 1606 aa33.46■■■□□ 2.95
COL19A1-203ENST00000478620 CDK11AQ9UQ88 783 aaPredicted RBP33.45■■■□□ 2.95
COL19A1-203ENST00000478620 TSPOAP1O95153 1857 aa33.44■■■□□ 2.94
COL19A1-203ENST00000478620 CASKIN1Q8WXD9 1431 aa33.43■■■□□ 2.94
COL19A1-203ENST00000478620 CDK13Q14004 1512 aaKnown RBP33.42■■■□□ 2.94
COL19A1-203ENST00000478620 AEBP2Q6ZN18 517 aaPredicted RBP33.38■■■□□ 2.93
COL19A1-203ENST00000478620 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
COL19A1-203ENST00000478620 PCF11O94913 1555 aaKnown RBP33.35■■■□□ 2.93
COL19A1-203ENST00000478620 FYCO1Q9BQS8 1478 aa33.31■■■□□ 2.92
COL19A1-203ENST00000478620 MAP3K4Q9Y6R4 1608 aa33.3■■■□□ 2.92
COL19A1-203ENST00000478620 CCDC18Q5T9S5 1454 aa33.27■■■□□ 2.92
COL19A1-203ENST00000478620 TEX14Q8IWB6 1497 aa33.26■■■□□ 2.92
COL19A1-203ENST00000478620 CFAP43Q8NDM7 1665 aa33.25■■■□□ 2.91
COL19A1-203ENST00000478620 PPRC1Q5VV67 1664 aaKnown RBP33.2■■■□□ 2.9
COL19A1-203ENST00000478620 LRRIQ1Q96JM4 1722 aa33.19■■■□□ 2.9
COL19A1-203ENST00000478620 ABCA9Q8IUA7 1624 aa33.19■■■□□ 2.9
COL19A1-203ENST00000478620 MAGI3Q5TCQ9 1506 aa33.18■■■□□ 2.9
COL19A1-203ENST00000478620 TROQ12816 1431 aaPredicted RBP33.18■■■□□ 2.9
COL19A1-203ENST00000478620 VPS8Q8N3P4 1428 aa33.14■■■□□ 2.9
COL19A1-203ENST00000478620 KDM6BO15054 1643 aa33.13■■■□□ 2.89
COL19A1-203ENST00000478620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.89
COL19A1-203ENST00000478620 MTUS2Q5JR59 1369 aa33.06■■■□□ 2.88
COL19A1-203ENST00000478620 KIF14Q15058 1648 aa33.06■■■□□ 2.88
COL19A1-203ENST00000478620 TTC37Q6PGP7 1564 aa33.03■■■□□ 2.88
COL19A1-203ENST00000478620 PHLDB1Q86UU1 1377 aa33.02■■■□□ 2.88
COL19A1-203ENST00000478620 APLP2Q06481 763 aa33.02■■■□□ 2.88
COL19A1-203ENST00000478620 COL17A1Q9UMD9 1497 aaPredicted RBP32.99■■■□□ 2.87
COL19A1-203ENST00000478620 PLCH2O75038 1416 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 EFCAB2Q5VUJ9 269 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 NEO1Q92859 1461 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 FANCAO15360 1455 aa32.96■■■□□ 2.87
COL19A1-203ENST00000478620 AKNAQ7Z591 1439 aa32.93■■■□□ 2.86
COL19A1-203ENST00000478620 ARAP3Q8WWN8 1544 aa32.9■■■□□ 2.86
COL19A1-203ENST00000478620 MYO5CQ9NQX4 1742 aa32.89■■■□□ 2.86
COL19A1-203ENST00000478620 RAPGEF3O95398 923 aa32.89■■■□□ 2.86
COL19A1-203ENST00000478620 TIAM1Q13009 1591 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 CFAP74Q9C0B2 1584 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 ARHGAP5Q13017 1502 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 CCNB3Q8WWL7 1395 aa32.85■■■□□ 2.85
COL19A1-203ENST00000478620 EHBP1L1Q8N3D4 1523 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms