RNA–Protein interactions for RNA: ENST00000478310.1

SLC13A4-205, Transcript of solute carrier family 13 member 4, humanhuman

TSL 2

Gene SLC13A4, Length 1,720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-205ENST00000478310 CLIP1P30622 1438 aa27.48■■□□□ 1.99
SLC13A4-205ENST00000478310 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
SLC13A4-205ENST00000478310 CHD1O14646 1710 aa27.41■■□□□ 1.98
SLC13A4-205ENST00000478310 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
SLC13A4-205ENST00000478310 NUP160Q12769 1436 aa27.38■■□□□ 1.97
SLC13A4-205ENST00000478310 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
SLC13A4-205ENST00000478310 ARHGAP35Q9NRY4 1499 aa27.34■■□□□ 1.97
SLC13A4-205ENST00000478310 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
SLC13A4-205ENST00000478310 P3H3Q8IVL6 736 aa27.32■■□□□ 1.96
SLC13A4-205ENST00000478310 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
SLC13A4-205ENST00000478310 JPH4Q96JJ6 628 aa27.22■■□□□ 1.95
SLC13A4-205ENST00000478310 EFCAB5A4FU69 1503 aa27.21■■□□□ 1.95
SLC13A4-205ENST00000478310 UGGT2Q9NYU1 1516 aa27.21■■□□□ 1.95
SLC13A4-205ENST00000478310 FHOD3Q2V2M9 1422 aa27.19■■□□□ 1.94
SLC13A4-205ENST00000478310 SAMD9Q5K651 1589 aa27.19■■□□□ 1.94
SLC13A4-205ENST00000478310 VPS8Q8N3P4 1428 aa27.17■■□□□ 1.94
SLC13A4-205ENST00000478310 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
SLC13A4-205ENST00000478310 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
SLC13A4-205ENST00000478310 CLASP1Q7Z460 1538 aa27.1■■□□□ 1.93
SLC13A4-205ENST00000478310 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
SLC13A4-205ENST00000478310 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
SLC13A4-205ENST00000478310 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
SLC13A4-205ENST00000478310 CARMIL2Q6F5E8 1435 aa27.04■■□□□ 1.92
SLC13A4-205ENST00000478310 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
SLC13A4-205ENST00000478310 FMN1Q68DA7 1419 aa27■■□□□ 1.91
SLC13A4-205ENST00000478310 PPARGC1BQ86YN6 1023 aaKnown RBP26.99■■□□□ 1.91
SLC13A4-205ENST00000478310 ATP1B4Q9UN42 357 aaPredicted RBP26.96■■□□□ 1.91
SLC13A4-205ENST00000478310 ERCC6L2Q5T890 1561 aa26.94■■□□□ 1.9
SLC13A4-205ENST00000478310 PCF11O94913 1555 aaKnown RBP26.93■■□□□ 1.9
SLC13A4-205ENST00000478310 APLP2Q06481 763 aa26.92■■□□□ 1.9
SLC13A4-205ENST00000478310 CASKIN1Q8WXD9 1431 aa26.91■■□□□ 1.9
SLC13A4-205ENST00000478310 FYCO1Q9BQS8 1478 aa26.86■■□□□ 1.89
SLC13A4-205ENST00000478310 PTPRGP23470 1445 aa26.84■■□□□ 1.89
SLC13A4-205ENST00000478310 PLB1Q6P1J6 1458 aa26.8■■□□□ 1.88
SLC13A4-205ENST00000478310 ARID3CA6NKF2 412 aa26.78■■□□□ 1.88
SLC13A4-205ENST00000478310 KANK4Q5T7N3 995 aaPredicted RBP26.78■■□□□ 1.88
SLC13A4-205ENST00000478310 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
SLC13A4-205ENST00000478310 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
SLC13A4-205ENST00000478310 TIAM1Q13009 1591 aa26.73■■□□□ 1.87
SLC13A4-205ENST00000478310 LRRIQ1Q96JM4 1722 aa26.73■■□□□ 1.87
SLC13A4-205ENST00000478310 ABCA8O94911 1581 aa26.72■■□□□ 1.87
SLC13A4-205ENST00000478310 MAP3K1Q13233 1512 aa26.71■■□□□ 1.87
SLC13A4-205ENST00000478310 NUP153P49790 1475 aaKnown RBP26.71■■□□□ 1.87
SLC13A4-205ENST00000478310 EPRSP07814 1512 aaKnown RBP26.69■■□□□ 1.86
SLC13A4-205ENST00000478310 UACAQ9BZF9 1416 aa26.67■■□□□ 1.86
SLC13A4-205ENST00000478310 CFAP43Q8NDM7 1665 aa26.67■■□□□ 1.86
SLC13A4-205ENST00000478310 CDK13Q14004 1512 aaKnown RBP26.67■■□□□ 1.86
SLC13A4-205ENST00000478310 CCDC18Q5T9S5 1454 aa26.65■■□□□ 1.86
SLC13A4-205ENST00000478310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.85
SLC13A4-205ENST00000478310 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.85
SLC13A4-205ENST00000478310 LRRC9Q6ZRR7 1453 aa26.64■■□□□ 1.85
SLC13A4-205ENST00000478310 ARHGEF11O15085 1522 aa26.62■■□□□ 1.85
SLC13A4-205ENST00000478310 ATP10BO94823 1461 aa26.57■■□□□ 1.84
SLC13A4-205ENST00000478310 ABCC2Q92887 1545 aa26.57■■□□□ 1.84
SLC13A4-205ENST00000478310 MTUS2Q5JR59 1369 aa26.57■■□□□ 1.84
SLC13A4-205ENST00000478310 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
SLC13A4-205ENST00000478310 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
SLC13A4-205ENST00000478310 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
SLC13A4-205ENST00000478310 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.84
SLC13A4-205ENST00000478310 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.84
SLC13A4-205ENST00000478310 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.84
SLC13A4-205ENST00000478310 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
SLC13A4-205ENST00000478310 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
SLC13A4-205ENST00000478310 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
SLC13A4-205ENST00000478310 EHBP1L1Q8N3D4 1523 aa26.47■■□□□ 1.83
SLC13A4-205ENST00000478310 CYB5RLQ6IPT4 315 aa26.45■■□□□ 1.83
SLC13A4-205ENST00000478310 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
SLC13A4-205ENST00000478310 KDM5BQ9UGL1 1544 aa26.42■■□□□ 1.82
SLC13A4-205ENST00000478310 PHLDB1Q86UU1 1377 aa26.41■■□□□ 1.82
SLC13A4-205ENST00000478310 TROQ12816 1431 aaPredicted RBP26.41■■□□□ 1.82
SLC13A4-205ENST00000478310 NCOA2Q15596 1464 aa26.39■■□□□ 1.82
SLC13A4-205ENST00000478310 ZCCHC11Q5TAX3 1644 aaKnown RBP26.39■■□□□ 1.82
SLC13A4-205ENST00000478310 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
SLC13A4-205ENST00000478310 NPM1P06748 294 aaKnown RBP eCLIP26.32■■□□□ 1.8
SLC13A4-205ENST00000478310 KIF14Q15058 1648 aa26.3■■□□□ 1.8
SLC13A4-205ENST00000478310 KCNH8Q96L42 1107 aa26.28■■□□□ 1.8
SLC13A4-205ENST00000478310 RRBP1Q9P2E9 1410 aaKnown RBP26.28■■□□□ 1.8
SLC13A4-205ENST00000478310 CCNB3Q8WWL7 1395 aa26.25■■□□□ 1.79
SLC13A4-205ENST00000478310 MYOM3Q5VTT5 1437 aa26.25■■□□□ 1.79
SLC13A4-205ENST00000478310 FGD6Q6ZV73 1430 aa26.22■■□□□ 1.79
SLC13A4-205ENST00000478310 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
SLC13A4-205ENST00000478310 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.79
SLC13A4-205ENST00000478310 WDR7Q9Y4E6 1490 aa26.2■■□□□ 1.78
SLC13A4-205ENST00000478310 FAM50AQ14320 339 aaKnown RBP26.19■■□□□ 1.78
SLC13A4-205ENST00000478310 GPATCH8Q9UKJ3 1502 aaKnown RBP26.16■■□□□ 1.78
SLC13A4-205ENST00000478310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.78
SLC13A4-205ENST00000478310 ITGAEP38570 1179 aa26.13■■□□□ 1.77
SLC13A4-205ENST00000478310 CFDP1Q9UEE9 299 aaPredicted RBP26.12■■□□□ 1.77
SLC13A4-205ENST00000478310 MIA2Q96PC5 1412 aa26.12■■□□□ 1.77
SLC13A4-205ENST00000478310 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
SLC13A4-205ENST00000478310 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
SLC13A4-205ENST00000478310 PTPN23Q9H3S7 1636 aa26.1■■□□□ 1.77
SLC13A4-205ENST00000478310 ZNF644Q9H582 1327 aaPredicted RBP26.09■■□□□ 1.77
SLC13A4-205ENST00000478310 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.77
SLC13A4-205ENST00000478310 ZNF777Q9ULD5 760 aaPredicted RBP26.08■■□□□ 1.76
SLC13A4-205ENST00000478310 ITSN2Q9NZM3 1697 aa26.07■■□□□ 1.76
SLC13A4-205ENST00000478310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.06■■□□□ 1.76
SLC13A4-205ENST00000478310 TCOF1Q13428 1488 aaKnown RBP26.05■■□□□ 1.76
SLC13A4-205ENST00000478310 MAPKBP1O60336 1514 aa26.05■■□□□ 1.76
SLC13A4-205ENST00000478310 PREX2Q70Z35 1606 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms