RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
ARHGEF3-209ENST00000477833 UBTFP17480 764 aaKnown RBP8.49□□□□□ -1.05
ARHGEF3-209ENST00000477833 CTTNBP2Q8WZ74 1663 aa8.48□□□□□ -1.05
ARHGEF3-209ENST00000477833 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
ARHGEF3-209ENST00000477833 CLIP1P30622 1438 aa8.46□□□□□ -1.06
ARHGEF3-209ENST00000477833 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
ARHGEF3-209ENST00000477833 MAGI1Q96QZ7 1491 aaPredicted RBP8.45□□□□□ -1.06
ARHGEF3-209ENST00000477833 GRIN2AQ12879 1464 aa8.44□□□□□ -1.06
ARHGEF3-209ENST00000477833 ARHGAP35Q9NRY4 1499 aa8.44□□□□□ -1.06
ARHGEF3-209ENST00000477833 SYNJ2O15056 1496 aa8.43□□□□□ -1.06
ARHGEF3-209ENST00000477833 CEP170Q5SW79 1584 aa8.42□□□□□ -1.06
ARHGEF3-209ENST00000477833 CHD1O14646 1710 aa8.42□□□□□ -1.06
ARHGEF3-209ENST00000477833 RANGAP1P46060 587 aaPredicted RBP8.41□□□□□ -1.06
ARHGEF3-209ENST00000477833 SAMD9Q5K651 1589 aa8.4□□□□□ -1.06
ARHGEF3-209ENST00000477833 IQGAP2Q13576 1575 aa8.39□□□□□ -1.07
ARHGEF3-209ENST00000477833 NUP160Q12769 1436 aa8.39□□□□□ -1.07
ARHGEF3-209ENST00000477833 VPS8Q8N3P4 1428 aa8.38□□□□□ -1.07
ARHGEF3-209ENST00000477833 EFCAB5A4FU69 1503 aa8.38□□□□□ -1.07
ARHGEF3-209ENST00000477833 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
ARHGEF3-209ENST00000477833 KIAA0586Q9BVV6 1533 aa8.36□□□□□ -1.07
ARHGEF3-209ENST00000477833 UGGT2Q9NYU1 1516 aa8.36□□□□□ -1.07
ARHGEF3-209ENST00000477833 PCF11O94913 1555 aaKnown RBP8.35□□□□□ -1.07
ARHGEF3-209ENST00000477833 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
ARHGEF3-209ENST00000477833 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
ARHGEF3-209ENST00000477833 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
ARHGEF3-209ENST00000477833 FBLN2P98095 1184 aa8.32□□□□□ -1.08
ARHGEF3-209ENST00000477833 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
ARHGEF3-209ENST00000477833 CLASP1Q7Z460 1538 aa8.32□□□□□ -1.08
ARHGEF3-209ENST00000477833 LRRIQ1Q96JM4 1722 aa8.31□□□□□ -1.08
ARHGEF3-209ENST00000477833 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
ARHGEF3-209ENST00000477833 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
ARHGEF3-209ENST00000477833 CFAP43Q8NDM7 1665 aa8.3□□□□□ -1.08
ARHGEF3-209ENST00000477833 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
ARHGEF3-209ENST00000477833 ERCC6L2Q5T890 1561 aa8.29□□□□□ -1.08
ARHGEF3-209ENST00000477833 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
ARHGEF3-209ENST00000477833 FYCO1Q9BQS8 1478 aa8.27□□□□□ -1.09
ARHGEF3-209ENST00000477833 CASKIN1Q8WXD9 1431 aa8.27□□□□□ -1.09
ARHGEF3-209ENST00000477833 FMN1Q68DA7 1419 aa8.25□□□□□ -1.09
ARHGEF3-209ENST00000477833 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
ARHGEF3-209ENST00000477833 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
ARHGEF3-209ENST00000477833 MAP3K1Q13233 1512 aa8.24□□□□□ -1.09
ARHGEF3-209ENST00000477833 PRG4Q92954 1404 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF3-209ENST00000477833 HECW1Q76N89 1606 aa8.23□□□□□ -1.09
ARHGEF3-209ENST00000477833 RAPGEF6Q8TEU7 1601 aa8.23□□□□□ -1.09
ARHGEF3-209ENST00000477833 KANK4Q5T7N3 995 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF3-209ENST00000477833 MAGI3Q5TCQ9 1506 aa8.23□□□□□ -1.09
ARHGEF3-209ENST00000477833 NUP153P49790 1475 aaKnown RBP8.22□□□□□ -1.09
ARHGEF3-209ENST00000477833 PLB1Q6P1J6 1458 aa8.22□□□□□ -1.09
ARHGEF3-209ENST00000477833 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
ARHGEF3-209ENST00000477833 ABCA8O94911 1581 aa8.22□□□□□ -1.09
ARHGEF3-209ENST00000477833 LRRC9Q6ZRR7 1453 aa8.21□□□□□ -1.09
ARHGEF3-209ENST00000477833 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
ARHGEF3-209ENST00000477833 PPP4R3CPQ6ZMV5 832 aa8.2□□□□□ -1.1
ARHGEF3-209ENST00000477833 EPRSP07814 1512 aaKnown RBP8.19□□□□□ -1.1
ARHGEF3-209ENST00000477833 PCGF6Q9BYE7 350 aa8.19□□□□□ -1.1
ARHGEF3-209ENST00000477833 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
ARHGEF3-209ENST00000477833 CCDC18Q5T9S5 1454 aa8.18□□□□□ -1.1
ARHGEF3-209ENST00000477833 ARID3CA6NKF2 412 aa8.16□□□□□ -1.1
ARHGEF3-209ENST00000477833 POTEDQ86YR6 584 aa8.16□□□□□ -1.1
ARHGEF3-209ENST00000477833 EHBP1L1Q8N3D4 1523 aa8.16□□□□□ -1.1
ARHGEF3-209ENST00000477833 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
ARHGEF3-209ENST00000477833 ARHGEF11O15085 1522 aa8.15□□□□□ -1.1
ARHGEF3-209ENST00000477833 PTPRGP23470 1445 aa8.15□□□□□ -1.1
ARHGEF3-209ENST00000477833 PHLDB1Q86UU1 1377 aa8.15□□□□□ -1.1
ARHGEF3-209ENST00000477833 APLP2Q06481 763 aa8.15□□□□□ -1.1
ARHGEF3-209ENST00000477833 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 RRBP1Q9P2E9 1410 aaKnown RBP8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 SUPT6HQ7KZ85 1726 aaKnown RBP8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 DMRT2Q9Y5R5 561 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 KIF14Q15058 1648 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 ADCY10Q96PN6 1610 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 ATP10BO94823 1461 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 NCOA2Q15596 1464 aa8.13□□□□□ -1.11
ARHGEF3-209ENST00000477833 UACAQ9BZF9 1416 aa8.12□□□□□ -1.11
ARHGEF3-209ENST00000477833 MTUS2Q5JR59 1369 aa8.11□□□□□ -1.11
ARHGEF3-209ENST00000477833 ZCCHC11Q5TAX3 1644 aaKnown RBP8.11□□□□□ -1.11
ARHGEF3-209ENST00000477833 UHRF1BP1LA0JNW5 1464 aa8.11□□□□□ -1.11
ARHGEF3-209ENST00000477833 MAPK8IP2Q13387 824 aaPredicted RBP8.1□□□□□ -1.11
ARHGEF3-209ENST00000477833 TROQ12816 1431 aaPredicted RBP8.1□□□□□ -1.11
ARHGEF3-209ENST00000477833 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 RIMBP3CA6NJZ7 1639 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 RIMBP3BA6NNM3 1639 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 RIMBP3Q9UFD9 1639 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 CCNB3Q8WWL7 1395 aa8.08□□□□□ -1.12
ARHGEF3-209ENST00000477833 MYOM3Q5VTT5 1437 aa8.07□□□□□ -1.12
ARHGEF3-209ENST00000477833 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
ARHGEF3-209ENST00000477833 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
ARHGEF3-209ENST00000477833 PTPN23Q9H3S7 1636 aa8.06□□□□□ -1.12
ARHGEF3-209ENST00000477833 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
ARHGEF3-209ENST00000477833 CNKSR2Q8WXI2 1034 aa8.05□□□□□ -1.12
ARHGEF3-209ENST00000477833 TCOF1Q13428 1488 aaKnown RBP8.05□□□□□ -1.12
ARHGEF3-209ENST00000477833 ITSN2Q9NZM3 1697 aa8.03□□□□□ -1.12
ARHGEF3-209ENST00000477833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.03□□□□□ -1.12
ARHGEF3-209ENST00000477833 HNRNPUL2Q1KMD3 747 aaKnown RBP8.03□□□□□ -1.12
ARHGEF3-209ENST00000477833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■■■■ 51.7
ARHGEF3-209ENST00000477833 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
ARHGEF3-209ENST00000477833 PTPRKQ15262 1439 aa8.03□□□□□ -1.12
ARHGEF3-209ENST00000477833 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms