RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IQGAP2Q13576 1575 aa26.37■■□□□ 1.81
VHL-203ENST00000477538 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
VHL-203ENST00000477538 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
VHL-203ENST00000477538 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
VHL-203ENST00000477538 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
VHL-203ENST00000477538 SHROOM2Q13796 1616 aa26.28■■□□□ 1.8
VHL-203ENST00000477538 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
VHL-203ENST00000477538 UGGT2Q9NYU1 1516 aa26.2■■□□□ 1.79
VHL-203ENST00000477538 JPH4Q96JJ6 628 aa26.15■■□□□ 1.78
VHL-203ENST00000477538 SAMD9Q5K651 1589 aa26.14■■□□□ 1.78
VHL-203ENST00000477538 KIAA0556O60303 1618 aa26.12■■□□□ 1.77
VHL-203ENST00000477538 EFCAB5A4FU69 1503 aa26.11■■□□□ 1.77
VHL-203ENST00000477538 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
VHL-203ENST00000477538 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
VHL-203ENST00000477538 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
VHL-203ENST00000477538 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
VHL-203ENST00000477538 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
VHL-203ENST00000477538 CLIP1P30622 1438 aa26.05■■□□□ 1.76
VHL-203ENST00000477538 CARMIL2Q6F5E8 1435 aa26.05■■□□□ 1.76
VHL-203ENST00000477538 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
VHL-203ENST00000477538 ARHGEF11O15085 1522 aa26.02■■□□□ 1.76
VHL-203ENST00000477538 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
VHL-203ENST00000477538 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
VHL-203ENST00000477538 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
VHL-203ENST00000477538 P3H3Q8IVL6 736 aa25.95■■□□□ 1.74
VHL-203ENST00000477538 FHOD3Q2V2M9 1422 aa25.95■■□□□ 1.74
VHL-203ENST00000477538 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
VHL-203ENST00000477538 PTPRGP23470 1445 aa25.84■■□□□ 1.73
VHL-203ENST00000477538 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
VHL-203ENST00000477538 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
VHL-203ENST00000477538 FMN1Q68DA7 1419 aa25.8■■□□□ 1.72
VHL-203ENST00000477538 RAPGEF6Q8TEU7 1601 aa25.79■■□□□ 1.72
VHL-203ENST00000477538 ABCA8O94911 1581 aa25.77■■□□□ 1.72
VHL-203ENST00000477538 PCF11O94913 1555 aaKnown RBP25.77■■□□□ 1.72
VHL-203ENST00000477538 PLB1Q6P1J6 1458 aa25.73■■□□□ 1.71
VHL-203ENST00000477538 VPS8Q8N3P4 1428 aa25.73■■□□□ 1.71
VHL-203ENST00000477538 HECW1Q76N89 1606 aa25.71■■□□□ 1.71
VHL-203ENST00000477538 ADCY10Q96PN6 1610 aa25.71■■□□□ 1.71
VHL-203ENST00000477538 LRRIQ1Q96JM4 1722 aa25.71■■□□□ 1.71
VHL-203ENST00000477538 UACAQ9BZF9 1416 aa25.71■■□□□ 1.71
VHL-203ENST00000477538 ABCC2Q92887 1545 aa25.7■■□□□ 1.7
VHL-203ENST00000477538 FYCO1Q9BQS8 1478 aa25.68■■□□□ 1.7
VHL-203ENST00000477538 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
VHL-203ENST00000477538 CASKIN1Q8WXD9 1431 aa25.67■■□□□ 1.7
VHL-203ENST00000477538 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
VHL-203ENST00000477538 NUP153P49790 1475 aaKnown RBP25.62■■□□□ 1.69
VHL-203ENST00000477538 ZCCHC11Q5TAX3 1644 aaKnown RBP25.59■■□□□ 1.69
VHL-203ENST00000477538 ATP1B4Q9UN42 357 aaPredicted RBP25.58■■□□□ 1.69
VHL-203ENST00000477538 CFAP43Q8NDM7 1665 aa25.56■■□□□ 1.68
VHL-203ENST00000477538 EPRSP07814 1512 aaKnown RBP25.55■■□□□ 1.68
VHL-203ENST00000477538 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
VHL-203ENST00000477538 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
VHL-203ENST00000477538 CCDC18Q5T9S5 1454 aa25.53■■□□□ 1.68
VHL-203ENST00000477538 ATP10BO94823 1461 aa25.51■■□□□ 1.67
VHL-203ENST00000477538 ARID3CA6NKF2 412 aa25.5■■□□□ 1.67
VHL-203ENST00000477538 TIAM1Q13009 1591 aa25.49■■□□□ 1.67
VHL-203ENST00000477538 MAP3K1Q13233 1512 aa25.45■■□□□ 1.66
VHL-203ENST00000477538 NPM1P06748 294 aaKnown RBP eCLIP25.44■■□□□ 1.66
VHL-203ENST00000477538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
VHL-203ENST00000477538 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
VHL-203ENST00000477538 APLP2Q06481 763 aa25.41■■□□□ 1.66
VHL-203ENST00000477538 MAPKBP1O60336 1514 aa25.39■■□□□ 1.66
VHL-203ENST00000477538 MAGI3Q5TCQ9 1506 aa25.37■■□□□ 1.65
VHL-203ENST00000477538 ASXL2Q76L83 1435 aa25.35■■□□□ 1.65
VHL-203ENST00000477538 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
VHL-203ENST00000477538 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.65
VHL-203ENST00000477538 WDR7Q9Y4E6 1490 aa25.33■■□□□ 1.65
VHL-203ENST00000477538 PLEKHD1A6NEE1 506 aa25.31■■□□□ 1.64
VHL-203ENST00000477538 LRRC9Q6ZRR7 1453 aa25.31■■□□□ 1.64
VHL-203ENST00000477538 TROQ12816 1431 aaPredicted RBP25.3■■□□□ 1.64
VHL-203ENST00000477538 MTUS2Q5JR59 1369 aa25.3■■□□□ 1.64
VHL-203ENST00000477538 SUPT6HQ7KZ85 1726 aaKnown RBP25.29■■□□□ 1.64
VHL-203ENST00000477538 KIF14Q15058 1648 aa25.28■■□□□ 1.64
VHL-203ENST00000477538 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
VHL-203ENST00000477538 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
VHL-203ENST00000477538 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
VHL-203ENST00000477538 KCNH8Q96L42 1107 aa25.19■■□□□ 1.62
VHL-203ENST00000477538 ABCA9Q8IUA7 1624 aa25.19■■□□□ 1.62
VHL-203ENST00000477538 TTC37Q6PGP7 1564 aa25.18■■□□□ 1.62
VHL-203ENST00000477538 MYO5CQ9NQX4 1742 aa25.17■■□□□ 1.62
VHL-203ENST00000477538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.17■■□□□ 1.62
VHL-203ENST00000477538 ABCC10Q5T3U5 1492 aa25.16■■□□□ 1.62
VHL-203ENST00000477538 GLI2P10070 1586 aa25.16■■□□□ 1.62
VHL-203ENST00000477538 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
VHL-203ENST00000477538 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
VHL-203ENST00000477538 NCOA2Q15596 1464 aa25.15■■□□□ 1.62
VHL-203ENST00000477538 ITSN2Q9NZM3 1697 aa25.13■■□□□ 1.61
VHL-203ENST00000477538 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
VHL-203ENST00000477538 TSPOAP1O95153 1857 aa25.12■■□□□ 1.61
VHL-203ENST00000477538 CDC42BPBQ9Y5S2 1711 aa25.1■■□□□ 1.61
VHL-203ENST00000477538 PREX2Q70Z35 1606 aa25.09■■□□□ 1.61
VHL-203ENST00000477538 FAM69CQ0P6D2 419 aa25.05■■□□□ 1.6
VHL-203ENST00000477538 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
VHL-203ENST00000477538 PPRC1Q5VV67 1664 aaKnown RBP25.02■■□□□ 1.6
VHL-203ENST00000477538 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
VHL-203ENST00000477538 PHLDB1Q86UU1 1377 aa25.01■■□□□ 1.59
VHL-203ENST00000477538 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
VHL-203ENST00000477538 CD109Q6YHK3 1445 aa25■■□□□ 1.59
VHL-203ENST00000477538 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
VHL-203ENST00000477538 ARHGAP5Q13017 1502 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms