RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 PRG4Q92954 1404 aaPredicted RBP39■■■■□ 3.83
CNIH4-208ENST00000477413 CARMIL1Q5VZK9 1371 aa38.98■■■■□ 3.83
CNIH4-208ENST00000477413 JPH4Q96JJ6 628 aa38.97■■■■□ 3.83
CNIH4-208ENST00000477413 RAPGEF2Q9Y4G8 1499 aa38.76■■■■□ 3.8
CNIH4-208ENST00000477413 IQGAP2Q13576 1575 aa38.75■■■■□ 3.79
CNIH4-208ENST00000477413 TRHP20396 242 aaPredicted RBP38.73■■■■□ 3.79
CNIH4-208ENST00000477413 ADCY10Q96PN6 1610 aa38.6■■■■□ 3.77
CNIH4-208ENST00000477413 PRXQ9BXM0 1461 aa38.57■■■■□ 3.76
CNIH4-208ENST00000477413 UGGT2Q9NYU1 1516 aa38.57■■■■□ 3.76
CNIH4-208ENST00000477413 CARMIL2Q6F5E8 1435 aa38.55■■■■□ 3.76
CNIH4-208ENST00000477413 MAPKBP1O60336 1514 aa38.53■■■■□ 3.76
CNIH4-208ENST00000477413 CTTNBP2Q8WZ74 1663 aa38.52■■■■□ 3.76
CNIH4-208ENST00000477413 DISP1Q96F81 1524 aa38.51■■■■□ 3.76
CNIH4-208ENST00000477413 TNIKQ9UKE5 1360 aa38.48■■■■□ 3.75
CNIH4-208ENST00000477413 KIF13AQ9H1H9 1805 aa38.46■■■■□ 3.75
CNIH4-208ENST00000477413 PTPRGP23470 1445 aa38.45■■■■□ 3.75
CNIH4-208ENST00000477413 KIAA0556O60303 1618 aa38.41■■■■□ 3.74
CNIH4-208ENST00000477413 EEA1Q15075 1411 aa38.36■■■■□ 3.73
CNIH4-208ENST00000477413 UHRF1BP1LA0JNW5 1464 aa38.35■■■■□ 3.73
CNIH4-208ENST00000477413 ABCC10Q5T3U5 1492 aa38.34■■■■□ 3.73
CNIH4-208ENST00000477413 ABCC2Q92887 1545 aa38.3■■■■□ 3.72
CNIH4-208ENST00000477413 DIP2BQ9P265 1576 aa38.3■■■■□ 3.72
CNIH4-208ENST00000477413 NPM1P06748 294 aaKnown RBP eCLIP38.28■■■■□ 3.72
CNIH4-208ENST00000477413 GOLGA3Q08378 1498 aa38.23■■■■□ 3.71
CNIH4-208ENST00000477413 UACAQ9BZF9 1416 aa38.23■■■■□ 3.71
CNIH4-208ENST00000477413 CSRNP3Q8WYN3 585 aa38.2■■■■□ 3.71
CNIH4-208ENST00000477413 KDM5BQ9UGL1 1544 aa38.15■■■■□ 3.7
CNIH4-208ENST00000477413 PLB1Q6P1J6 1458 aa38.07■■■■□ 3.68
CNIH4-208ENST00000477413 FAM69CQ0P6D2 419 aa38.05■■■■□ 3.68
CNIH4-208ENST00000477413 ABCA8O94911 1581 aa38.04■■■■□ 3.68
CNIH4-208ENST00000477413 KIF21BO75037 1637 aa38.04■■■■□ 3.68
CNIH4-208ENST00000477413 ASXL2Q76L83 1435 aa38.04■■■■□ 3.68
CNIH4-208ENST00000477413 ZCCHC11Q5TAX3 1644 aaKnown RBP38.03■■■■□ 3.68
CNIH4-208ENST00000477413 TTBK1Q5TCY1 1321 aaPredicted RBP38.03■■■■□ 3.68
CNIH4-208ENST00000477413 SAMD9Q5K651 1589 aa38.02■■■■□ 3.68
CNIH4-208ENST00000477413 GLI2P10070 1586 aa38.02■■■■□ 3.68
CNIH4-208ENST00000477413 CHIC1Q5VXU3 224 aa37.94■■■■□ 3.66
CNIH4-208ENST00000477413 EPRSP07814 1512 aaKnown RBP37.86■■■■□ 3.65
CNIH4-208ENST00000477413 PPRC1Q5VV67 1664 aaKnown RBP37.84■■■■□ 3.65
CNIH4-208ENST00000477413 TSPOAP1O95153 1857 aa37.83■■■■□ 3.65
CNIH4-208ENST00000477413 MAP3K4Q9Y6R4 1608 aa37.82■■■■□ 3.64
CNIH4-208ENST00000477413 WDR7Q9Y4E6 1490 aa37.82■■■■□ 3.64
CNIH4-208ENST00000477413 KDM6BO15054 1643 aa37.75■■■■□ 3.63
CNIH4-208ENST00000477413 EFCAB5A4FU69 1503 aa37.74■■■■□ 3.63
CNIH4-208ENST00000477413 FAM9AQ8IZU1 332 aaPredicted RBP37.73■■■■□ 3.63
CNIH4-208ENST00000477413 RAPGEF6Q8TEU7 1601 aa37.69■■■■□ 3.62
CNIH4-208ENST00000477413 ATP10BO94823 1461 aa37.62■■■■□ 3.61
CNIH4-208ENST00000477413 CFAP43Q8NDM7 1665 aa37.62■■■■□ 3.61
CNIH4-208ENST00000477413 TEX14Q8IWB6 1497 aa37.61■■■■□ 3.61
CNIH4-208ENST00000477413 P3H3Q8IVL6 736 aa37.61■■■■□ 3.61
CNIH4-208ENST00000477413 FHOD3Q2V2M9 1422 aa37.59■■■■□ 3.61
CNIH4-208ENST00000477413 NUP153P49790 1475 aaKnown RBP37.55■■■■□ 3.6
CNIH4-208ENST00000477413 MAGI3Q5TCQ9 1506 aa37.52■■■■□ 3.6
CNIH4-208ENST00000477413 ABCA9Q8IUA7 1624 aa37.44■■■■□ 3.58
CNIH4-208ENST00000477413 CD109Q6YHK3 1445 aa37.43■■■■□ 3.58
CNIH4-208ENST00000477413 COL17A1Q9UMD9 1497 aaPredicted RBP37.41■■■■□ 3.58
CNIH4-208ENST00000477413 ARHGAP35Q9NRY4 1499 aa37.39■■■■□ 3.58
CNIH4-208ENST00000477413 UBTFP17480 764 aaKnown RBP37.36■■■■□ 3.57
CNIH4-208ENST00000477413 RANGAP1P46060 587 aaPredicted RBP37.34■■■■□ 3.57
CNIH4-208ENST00000477413 KCNH8Q96L42 1107 aa37.32■■■■□ 3.56
CNIH4-208ENST00000477413 FMN1Q68DA7 1419 aa37.31■■■■□ 3.56
CNIH4-208ENST00000477413 ARID3CA6NKF2 412 aa37.3■■■■□ 3.56
CNIH4-208ENST00000477413 HECW1Q76N89 1606 aa37.24■■■■□ 3.55
CNIH4-208ENST00000477413 ARAP3Q8WWN8 1544 aa37.22■■■■□ 3.55
CNIH4-208ENST00000477413 PHLDB1Q86UU1 1377 aa37.18■■■■□ 3.54
CNIH4-208ENST00000477413 CDK13Q14004 1512 aaKnown RBP37.16■■■■□ 3.54
CNIH4-208ENST00000477413 AEBP2Q6ZN18 517 aaPredicted RBP37.16■■■■□ 3.54
CNIH4-208ENST00000477413 EHMT2Q96KQ7 1210 aa37.16■■■■□ 3.54
CNIH4-208ENST00000477413 NEO1Q92859 1461 aa37.15■■■■□ 3.54
CNIH4-208ENST00000477413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.12■■■■□ 3.53
CNIH4-208ENST00000477413 HNRNPUL2Q1KMD3 747 aaKnown RBP37.12■■■■□ 3.53
CNIH4-208ENST00000477413 PLEKHD1A6NEE1 506 aa37.1■■■■□ 3.53
CNIH4-208ENST00000477413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.1■■■■□ 3.534e-6■■□□□ 13.9
CNIH4-208ENST00000477413 TTC37Q6PGP7 1564 aa37.06■■■■□ 3.52
CNIH4-208ENST00000477413 LRRIQ1Q96JM4 1722 aa37.04■■■■□ 3.52
CNIH4-208ENST00000477413 CFAP74Q9C0B2 1584 aa37.03■■■■□ 3.52
CNIH4-208ENST00000477413 KDM4FA0A1W2PPD8 638 aa37.01■■■■□ 3.52
CNIH4-208ENST00000477413 PCF11O94913 1555 aaKnown RBP36.99■■■■□ 3.51
CNIH4-208ENST00000477413 FRMPD1Q5SYB0 1578 aa36.97■■■■□ 3.51
CNIH4-208ENST00000477413 CASKIN1Q8WXD9 1431 aa36.97■■■■□ 3.51
CNIH4-208ENST00000477413 ADGRL1O94910 1474 aa36.94■■■■□ 3.5
CNIH4-208ENST00000477413 CLIP1P30622 1438 aa36.92■■■■□ 3.5
CNIH4-208ENST00000477413 FANCAO15360 1455 aa36.91■■■■□ 3.5
CNIH4-208ENST00000477413 CCDC18Q5T9S5 1454 aa36.91■■■■□ 3.5
CNIH4-208ENST00000477413 FYCO1Q9BQS8 1478 aa36.9■■■■□ 3.5
CNIH4-208ENST00000477413 TROQ12816 1431 aaPredicted RBP36.89■■■■□ 3.5
CNIH4-208ENST00000477413 KIF14Q15058 1648 aa36.88■■■■□ 3.5
CNIH4-208ENST00000477413 RICTORQ6R327 1708 aa36.88■■■■□ 3.49
CNIH4-208ENST00000477413 CDK11AQ9UQ88 783 aaPredicted RBP36.86■■■■□ 3.49
CNIH4-208ENST00000477413 MYO5CQ9NQX4 1742 aa36.85■■■■□ 3.49
CNIH4-208ENST00000477413 PLCH2O75038 1416 aa36.85■■■■□ 3.49
CNIH4-208ENST00000477413 AKNAQ7Z591 1439 aa36.85■■■■□ 3.49
CNIH4-208ENST00000477413 DENND4BO75064 1496 aaPredicted RBP36.8■■■■□ 3.48
CNIH4-208ENST00000477413 ZMYM4Q5VZL5 1548 aa36.8■■■■□ 3.48
CNIH4-208ENST00000477413 ATP1B4Q9UN42 357 aaPredicted RBP36.77■■■■□ 3.48
CNIH4-208ENST00000477413 ARHGEF40Q8TER5 1519 aa36.75■■■■□ 3.47
CNIH4-208ENST00000477413 RAPGEF3O95398 923 aa36.75■■■■□ 3.47
CNIH4-208ENST00000477413 POGZQ7Z3K3 1410 aa36.66■■■■□ 3.46
CNIH4-208ENST00000477413 PREX2Q70Z35 1606 aa36.65■■■■□ 3.46
CNIH4-208ENST00000477413 MAGI2Q86UL8 1455 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms