RNA–Protein interactions for RNA: ENST00000477324.6

XPC-206, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-206ENST00000477324 AQRO60306 1485 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■■■■ 38.1
XPC-206ENST00000477324 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
XPC-206ENST00000477324 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
XPC-206ENST00000477324 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
XPC-206ENST00000477324 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
XPC-206ENST00000477324 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
XPC-206ENST00000477324 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
XPC-206ENST00000477324 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
XPC-206ENST00000477324 APLP2Q06481 763 aa12.48□□□□□ -0.41
XPC-206ENST00000477324 EFCAB5A4FU69 1503 aa12.47□□□□□ -0.41
XPC-206ENST00000477324 IQGAP2Q13576 1575 aa12.44□□□□□ -0.42
XPC-206ENST00000477324 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
XPC-206ENST00000477324 P3H3Q8IVL6 736 aa12.42□□□□□ -0.42
XPC-206ENST00000477324 SAMD9Q5K651 1589 aa12.42□□□□□ -0.42
XPC-206ENST00000477324 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
XPC-206ENST00000477324 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
XPC-206ENST00000477324 FHOD3Q2V2M9 1422 aa12.41□□□□□ -0.42
XPC-206ENST00000477324 CHD1O14646 1710 aa12.4□□□□□ -0.43
XPC-206ENST00000477324 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
XPC-206ENST00000477324 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
XPC-206ENST00000477324 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
XPC-206ENST00000477324 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
XPC-206ENST00000477324 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
XPC-206ENST00000477324 FBLN2P98095 1184 aa12.34□□□□□ -0.43
XPC-206ENST00000477324 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
XPC-206ENST00000477324 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
XPC-206ENST00000477324 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
XPC-206ENST00000477324 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
XPC-206ENST00000477324 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
XPC-206ENST00000477324 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
XPC-206ENST00000477324 UGGT2Q9NYU1 1516 aa12.31□□□□□ -0.44
XPC-206ENST00000477324 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
XPC-206ENST00000477324 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
XPC-206ENST00000477324 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
XPC-206ENST00000477324 HRCP23327 699 aa12.27□□□□□ -0.45
XPC-206ENST00000477324 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
XPC-206ENST00000477324 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
XPC-206ENST00000477324 NUP160Q12769 1436 aa12.24□□□□□ -0.45
XPC-206ENST00000477324 DISP1Q96F81 1524 aa12.23□□□□□ -0.45
XPC-206ENST00000477324 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
XPC-206ENST00000477324 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
XPC-206ENST00000477324 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
XPC-206ENST00000477324 CCDC18Q5T9S5 1454 aa12.2□□□□□ -0.46
XPC-206ENST00000477324 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
XPC-206ENST00000477324 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
XPC-206ENST00000477324 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
XPC-206ENST00000477324 CDK13Q14004 1512 aaKnown RBP12.17□□□□□ -0.46
XPC-206ENST00000477324 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
XPC-206ENST00000477324 FOXD1Q16676 465 aa12.15□□□□□ -0.46
XPC-206ENST00000477324 EPRSP07814 1512 aaKnown RBP12.15□□□□□ -0.46
XPC-206ENST00000477324 SHROOM2Q13796 1616 aa12.15□□□□□ -0.47
XPC-206ENST00000477324 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
XPC-206ENST00000477324 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
XPC-206ENST00000477324 MAGI3Q5TCQ9 1506 aa12.13□□□□□ -0.47
XPC-206ENST00000477324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
XPC-206ENST00000477324 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
XPC-206ENST00000477324 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
XPC-206ENST00000477324 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
XPC-206ENST00000477324 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
XPC-206ENST00000477324 PLB1Q6P1J6 1458 aa12.1□□□□□ -0.47
XPC-206ENST00000477324 ITGAEP38570 1179 aa12.1□□□□□ -0.47
XPC-206ENST00000477324 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
XPC-206ENST00000477324 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
XPC-206ENST00000477324 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
XPC-206ENST00000477324 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
XPC-206ENST00000477324 ABCA8O94911 1581 aa12.09□□□□□ -0.47
XPC-206ENST00000477324 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
XPC-206ENST00000477324 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
XPC-206ENST00000477324 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
XPC-206ENST00000477324 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
XPC-206ENST00000477324 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
XPC-206ENST00000477324 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
XPC-206ENST00000477324 MYOM3Q5VTT5 1437 aa12.04□□□□□ -0.48
XPC-206ENST00000477324 ARHGEF11O15085 1522 aa12.03□□□□□ -0.48
XPC-206ENST00000477324 KIF14Q15058 1648 aa12.03□□□□□ -0.48
XPC-206ENST00000477324 PTPRGP23470 1445 aa12.03□□□□□ -0.48
XPC-206ENST00000477324 ADRA2BP18089 450 aa12.01□□□□□ -0.49
XPC-206ENST00000477324 CDK11AQ9UQ88 783 aaPredicted RBP12□□□□□ -0.49
XPC-206ENST00000477324 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
XPC-206ENST00000477324 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
XPC-206ENST00000477324 PPP6R1Q9UPN7 881 aa11.97□□□□□ -0.49
XPC-206ENST00000477324 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
XPC-206ENST00000477324 ABCC2Q92887 1545 aa11.96□□□□□ -0.49
XPC-206ENST00000477324 ATP10BO94823 1461 aa11.96□□□□□ -0.49
XPC-206ENST00000477324 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
XPC-206ENST00000477324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.49
XPC-206ENST00000477324 GCC2Q8IWJ2 1684 aa11.96□□□□□ -0.5
XPC-206ENST00000477324 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
XPC-206ENST00000477324 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
XPC-206ENST00000477324 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
XPC-206ENST00000477324 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
XPC-206ENST00000477324 RAB3GAP2Q9H2M9 1393 aa11.93□□□□□ -0.5
XPC-206ENST00000477324 MYO5CQ9NQX4 1742 aa11.93□□□□□ -0.5
XPC-206ENST00000477324 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
XPC-206ENST00000477324 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
XPC-206ENST00000477324 PLEKHD1A6NEE1 506 aa11.92□□□□□ -0.5
XPC-206ENST00000477324 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
XPC-206ENST00000477324 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
XPC-206ENST00000477324 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
XPC-206ENST00000477324 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms