RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
GSDMB-208ENST00000477054 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
GSDMB-208ENST00000477054 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
GSDMB-208ENST00000477054 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
GSDMB-208ENST00000477054 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
GSDMB-208ENST00000477054 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
GSDMB-208ENST00000477054 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
GSDMB-208ENST00000477054 EIF4G2P78344 907 aaKnown RBP eCLIP13.31□□□□□ -0.28
GSDMB-208ENST00000477054 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
GSDMB-208ENST00000477054 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.28
GSDMB-208ENST00000477054 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 KIF21BO75037 1637 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 SUPT16HQ9Y5B9 1047 aaKnown RBP13.25□□□□□ -0.29
GSDMB-208ENST00000477054 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
GSDMB-208ENST00000477054 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 MRS2Q9HD23 443 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
GSDMB-208ENST00000477054 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
GSDMB-208ENST00000477054 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
GSDMB-208ENST00000477054 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
GSDMB-208ENST00000477054 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
GSDMB-208ENST00000477054 TMC1Q8TDI8 760 aa13.18□□□□□ -0.3
GSDMB-208ENST00000477054 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
GSDMB-208ENST00000477054 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.35e-7■■■□□ 19
GSDMB-208ENST00000477054 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
GSDMB-208ENST00000477054 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 IGF1RP08069 1367 aa13.16□□□□□ -0.3
GSDMB-208ENST00000477054 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
GSDMB-208ENST00000477054 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
GSDMB-208ENST00000477054 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
GSDMB-208ENST00000477054 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
GSDMB-208ENST00000477054 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
GSDMB-208ENST00000477054 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
GSDMB-208ENST00000477054 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
GSDMB-208ENST00000477054 CFTRP13569 1480 aa13.11□□□□□ -0.31
GSDMB-208ENST00000477054 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
GSDMB-208ENST00000477054 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
GSDMB-208ENST00000477054 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
GSDMB-208ENST00000477054 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
GSDMB-208ENST00000477054 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
GSDMB-208ENST00000477054 NBR1Q14596 966 aa13.07□□□□□ -0.32
GSDMB-208ENST00000477054 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
GSDMB-208ENST00000477054 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
GSDMB-208ENST00000477054 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
GSDMB-208ENST00000477054 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
GSDMB-208ENST00000477054 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
GSDMB-208ENST00000477054 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
GSDMB-208ENST00000477054 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
GSDMB-208ENST00000477054 CHGAP10645 457 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
GSDMB-208ENST00000477054 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
GSDMB-208ENST00000477054 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
GSDMB-208ENST00000477054 CUX1P39880 1505 aa13.02□□□□□ -0.32
GSDMB-208ENST00000477054 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
GSDMB-208ENST00000477054 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
GSDMB-208ENST00000477054 DEKP35659 375 aaKnown RBP13.01□□□□□ -0.33
GSDMB-208ENST00000477054 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
GSDMB-208ENST00000477054 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 NEFMP07197 916 aa12.99□□□□□ -0.33
GSDMB-208ENST00000477054 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
GSDMB-208ENST00000477054 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
GSDMB-208ENST00000477054 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
GSDMB-208ENST00000477054 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
GSDMB-208ENST00000477054 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
GSDMB-208ENST00000477054 FOXD1Q16676 465 aa12.97□□□□□ -0.33
GSDMB-208ENST00000477054 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
GSDMB-208ENST00000477054 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
GSDMB-208ENST00000477054 PKD2Q13563 968 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
GSDMB-208ENST00000477054 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
GSDMB-208ENST00000477054 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
GSDMB-208ENST00000477054 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
GSDMB-208ENST00000477054 NUP155O75694 1391 aa12.9□□□□□ -0.35
GSDMB-208ENST00000477054 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
GSDMB-208ENST00000477054 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
GSDMB-208ENST00000477054 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
GSDMB-208ENST00000477054 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
GSDMB-208ENST00000477054 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
GSDMB-208ENST00000477054 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
GSDMB-208ENST00000477054 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms