RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
PSMB4-204ENST00000476467 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
PSMB4-204ENST00000476467 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
PSMB4-204ENST00000476467 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
PSMB4-204ENST00000476467 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
PSMB4-204ENST00000476467 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
PSMB4-204ENST00000476467 SHROOM2Q13796 1616 aa21.29■■□□□ 1
PSMB4-204ENST00000476467 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
PSMB4-204ENST00000476467 CEP162Q5TB80 1403 aa21.27■■□□□ 1
PSMB4-204ENST00000476467 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
PSMB4-204ENST00000476467 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
PSMB4-204ENST00000476467 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
PSMB4-204ENST00000476467 CLIP1P30622 1438 aa21.23■□□□□ 0.99
PSMB4-204ENST00000476467 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
PSMB4-204ENST00000476467 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
PSMB4-204ENST00000476467 KIAA0556O60303 1618 aa21.19■□□□□ 0.98
PSMB4-204ENST00000476467 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
PSMB4-204ENST00000476467 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
PSMB4-204ENST00000476467 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
PSMB4-204ENST00000476467 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
PSMB4-204ENST00000476467 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
PSMB4-204ENST00000476467 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
PSMB4-204ENST00000476467 P3H3Q8IVL6 736 aa21.08■□□□□ 0.97
PSMB4-204ENST00000476467 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
PSMB4-204ENST00000476467 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
PSMB4-204ENST00000476467 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
PSMB4-204ENST00000476467 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
PSMB4-204ENST00000476467 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
PSMB4-204ENST00000476467 PTPRGP23470 1445 aa21■□□□□ 0.95
PSMB4-204ENST00000476467 VPS8Q8N3P4 1428 aa20.98■□□□□ 0.95
PSMB4-204ENST00000476467 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
PSMB4-204ENST00000476467 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
PSMB4-204ENST00000476467 ABCA8O94911 1581 aa20.92■□□□□ 0.94
PSMB4-204ENST00000476467 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
PSMB4-204ENST00000476467 CASKIN1Q8WXD9 1431 aa20.9■□□□□ 0.94
PSMB4-204ENST00000476467 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
PSMB4-204ENST00000476467 FYCO1Q9BQS8 1478 aa20.9■□□□□ 0.94
PSMB4-204ENST00000476467 UACAQ9BZF9 1416 aa20.88■□□□□ 0.93
PSMB4-204ENST00000476467 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
PSMB4-204ENST00000476467 HECW1Q76N89 1606 aa20.88■□□□□ 0.93
PSMB4-204ENST00000476467 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
PSMB4-204ENST00000476467 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
PSMB4-204ENST00000476467 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
PSMB4-204ENST00000476467 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
PSMB4-204ENST00000476467 LRRIQ1Q96JM4 1722 aa20.79■□□□□ 0.92
PSMB4-204ENST00000476467 ATP1B4Q9UN42 357 aaPredicted RBP20.79■□□□□ 0.92
PSMB4-204ENST00000476467 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
PSMB4-204ENST00000476467 CCDC18Q5T9S5 1454 aa20.78■□□□□ 0.92
PSMB4-204ENST00000476467 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.92
PSMB4-204ENST00000476467 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
PSMB4-204ENST00000476467 KDM5BQ9UGL1 1544 aa20.74■□□□□ 0.91
PSMB4-204ENST00000476467 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
PSMB4-204ENST00000476467 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
PSMB4-204ENST00000476467 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
PSMB4-204ENST00000476467 ATP10BO94823 1461 aa20.73■□□□□ 0.91
PSMB4-204ENST00000476467 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
PSMB4-204ENST00000476467 ARID3CA6NKF2 412 aa20.7■□□□□ 0.9
PSMB4-204ENST00000476467 APLP2Q06481 763 aa20.69■□□□□ 0.9
PSMB4-204ENST00000476467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
PSMB4-204ENST00000476467 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
PSMB4-204ENST00000476467 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.89
PSMB4-204ENST00000476467 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
PSMB4-204ENST00000476467 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
PSMB4-204ENST00000476467 MAGI3Q5TCQ9 1506 aa20.61■□□□□ 0.89
PSMB4-204ENST00000476467 EHBP1L1Q8N3D4 1523 aa20.61■□□□□ 0.89
PSMB4-204ENST00000476467 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
PSMB4-204ENST00000476467 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
PSMB4-204ENST00000476467 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
PSMB4-204ENST00000476467 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
PSMB4-204ENST00000476467 ASXL2Q76L83 1435 aa20.57■□□□□ 0.88
PSMB4-204ENST00000476467 KANK4Q5T7N3 995 aaPredicted RBP20.57■□□□□ 0.88
PSMB4-204ENST00000476467 WDR7Q9Y4E6 1490 aa20.57■□□□□ 0.88
PSMB4-204ENST00000476467 KIF14Q15058 1648 aa20.52■□□□□ 0.88
PSMB4-204ENST00000476467 SUPT6HQ7KZ85 1726 aaKnown RBP20.51■□□□□ 0.87
PSMB4-204ENST00000476467 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
PSMB4-204ENST00000476467 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
PSMB4-204ENST00000476467 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
PSMB4-204ENST00000476467 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
PSMB4-204ENST00000476467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.862e-13■■■□□ 17.2
PSMB4-204ENST00000476467 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
PSMB4-204ENST00000476467 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
PSMB4-204ENST00000476467 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
PSMB4-204ENST00000476467 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
PSMB4-204ENST00000476467 GLI2P10070 1586 aa20.4■□□□□ 0.86
PSMB4-204ENST00000476467 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
PSMB4-204ENST00000476467 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
PSMB4-204ENST00000476467 ITSN2Q9NZM3 1697 aa20.37■□□□□ 0.85
PSMB4-204ENST00000476467 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
PSMB4-204ENST00000476467 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
PSMB4-204ENST00000476467 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
PSMB4-204ENST00000476467 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
PSMB4-204ENST00000476467 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
PSMB4-204ENST00000476467 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
PSMB4-204ENST00000476467 MAP3K4Q9Y6R4 1608 aa20.33■□□□□ 0.85
PSMB4-204ENST00000476467 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
PSMB4-204ENST00000476467 HRCP23327 699 aa20.31■□□□□ 0.84
PSMB4-204ENST00000476467 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
PSMB4-204ENST00000476467 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
PSMB4-204ENST00000476467 PLCH2O75038 1416 aa20.3■□□□□ 0.84
PSMB4-204ENST00000476467 CD109Q6YHK3 1445 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms