RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 FHAD1B1AJZ9 1412 aa13.26□□□□□ -0.29
CCDC66-216ENST00000476142 CUL7Q14999 1698 aa13.25□□□□□ -0.29
CCDC66-216ENST00000476142 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
CCDC66-216ENST00000476142 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
CCDC66-216ENST00000476142 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
CCDC66-216ENST00000476142 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
CCDC66-216ENST00000476142 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
CCDC66-216ENST00000476142 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
CCDC66-216ENST00000476142 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.29
CCDC66-216ENST00000476142 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
CCDC66-216ENST00000476142 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
CCDC66-216ENST00000476142 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
CCDC66-216ENST00000476142 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
CCDC66-216ENST00000476142 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
CCDC66-216ENST00000476142 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
CCDC66-216ENST00000476142 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
CCDC66-216ENST00000476142 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
CCDC66-216ENST00000476142 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
CCDC66-216ENST00000476142 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
CCDC66-216ENST00000476142 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
CCDC66-216ENST00000476142 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.317e-6■□□□□ 9.9
CCDC66-216ENST00000476142 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
CCDC66-216ENST00000476142 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
CCDC66-216ENST00000476142 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
CCDC66-216ENST00000476142 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
CCDC66-216ENST00000476142 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
CCDC66-216ENST00000476142 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
CCDC66-216ENST00000476142 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
CCDC66-216ENST00000476142 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
CCDC66-216ENST00000476142 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
CCDC66-216ENST00000476142 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
CCDC66-216ENST00000476142 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
CCDC66-216ENST00000476142 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
CCDC66-216ENST00000476142 ERCC6Q03468 1493 aa13.03□□□□□ -0.32
CCDC66-216ENST00000476142 ARID3CA6NKF2 412 aa13.03□□□□□ -0.32
CCDC66-216ENST00000476142 ADAMTS12P58397 1594 aa13.02□□□□□ -0.32
CCDC66-216ENST00000476142 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
CCDC66-216ENST00000476142 MIER1Q8N108 512 aa13.02□□□□□ -0.33
CCDC66-216ENST00000476142 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
CCDC66-216ENST00000476142 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
CCDC66-216ENST00000476142 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
CCDC66-216ENST00000476142 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
CCDC66-216ENST00000476142 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
CCDC66-216ENST00000476142 IQGAP2Q13576 1575 aa13□□□□□ -0.33
CCDC66-216ENST00000476142 WDR62O43379 1518 aa12.99□□□□□ -0.33
CCDC66-216ENST00000476142 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
CCDC66-216ENST00000476142 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
CCDC66-216ENST00000476142 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
CCDC66-216ENST00000476142 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
CCDC66-216ENST00000476142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC66-216ENST00000476142 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
CCDC66-216ENST00000476142 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
CCDC66-216ENST00000476142 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
CCDC66-216ENST00000476142 FBLN2P98095 1184 aa12.94□□□□□ -0.34
CCDC66-216ENST00000476142 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
CCDC66-216ENST00000476142 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
CCDC66-216ENST00000476142 HECW1Q76N89 1606 aa12.92□□□□□ -0.34
CCDC66-216ENST00000476142 MAGI3Q5TCQ9 1506 aa12.92□□□□□ -0.34
CCDC66-216ENST00000476142 EIF4G3O43432 1585 aaKnown RBP12.92□□□□□ -0.34
CCDC66-216ENST00000476142 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
CCDC66-216ENST00000476142 PTPRKQ15262 1439 aa12.92□□□□□ -0.34
CCDC66-216ENST00000476142 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
CCDC66-216ENST00000476142 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
CCDC66-216ENST00000476142 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
CCDC66-216ENST00000476142 GRIN2AQ12879 1464 aa12.9□□□□□ -0.35
CCDC66-216ENST00000476142 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.35
CCDC66-216ENST00000476142 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.35
CCDC66-216ENST00000476142 RRP7BPQ9NSQ0 103 aa12.87□□□□□ -0.35
CCDC66-216ENST00000476142 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
CCDC66-216ENST00000476142 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
CCDC66-216ENST00000476142 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
CCDC66-216ENST00000476142 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
CCDC66-216ENST00000476142 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
CCDC66-216ENST00000476142 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
CCDC66-216ENST00000476142 NAIPQ13075 1403 aa12.85□□□□□ -0.35
CCDC66-216ENST00000476142 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
CCDC66-216ENST00000476142 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
CCDC66-216ENST00000476142 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
CCDC66-216ENST00000476142 TRIM52Q96A61 297 aa12.82□□□□□ -0.36
CCDC66-216ENST00000476142 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
CCDC66-216ENST00000476142 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
CCDC66-216ENST00000476142 NUP153P49790 1475 aaKnown RBP12.8□□□□□ -0.36
CCDC66-216ENST00000476142 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
CCDC66-216ENST00000476142 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
CCDC66-216ENST00000476142 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
CCDC66-216ENST00000476142 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-216ENST00000476142 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-216ENST00000476142 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
CCDC66-216ENST00000476142 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
CCDC66-216ENST00000476142 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
CCDC66-216ENST00000476142 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
CCDC66-216ENST00000476142 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
CCDC66-216ENST00000476142 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
CCDC66-216ENST00000476142 PRG4Q92954 1404 aaPredicted RBP12.75□□□□□ -0.37
CCDC66-216ENST00000476142 DDX10Q13206 875 aaKnown RBP12.75□□□□□ -0.37
CCDC66-216ENST00000476142 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-216ENST00000476142 NUP160Q12769 1436 aa12.73□□□□□ -0.37
CCDC66-216ENST00000476142 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
CCDC66-216ENST00000476142 DAPK1P53355 1430 aa12.72□□□□□ -0.37
CCDC66-216ENST00000476142 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms