RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 MAGI1Q96QZ7 1491 aaPredicted RBP28.61■■■□□ 2.17
LAMP3-204ENST00000476015 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
LAMP3-204ENST00000476015 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
LAMP3-204ENST00000476015 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
LAMP3-204ENST00000476015 CLIP1P30622 1438 aa28.55■■■□□ 2.16
LAMP3-204ENST00000476015 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
LAMP3-204ENST00000476015 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
LAMP3-204ENST00000476015 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
LAMP3-204ENST00000476015 FBLN2P98095 1184 aa28.48■■■□□ 2.15
LAMP3-204ENST00000476015 CHD1O14646 1710 aa28.45■■■□□ 2.14
LAMP3-204ENST00000476015 GRIN2AQ12879 1464 aa28.44■■■□□ 2.14
LAMP3-204ENST00000476015 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
LAMP3-204ENST00000476015 KIAA0586Q9BVV6 1533 aa28.33■■■□□ 2.13
LAMP3-204ENST00000476015 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
LAMP3-204ENST00000476015 ARHGAP35Q9NRY4 1499 aa28.31■■■□□ 2.12
LAMP3-204ENST00000476015 NUP160Q12769 1436 aa28.26■■■□□ 2.12
LAMP3-204ENST00000476015 VPS8Q8N3P4 1428 aa28.25■■■□□ 2.11
LAMP3-204ENST00000476015 IQGAP2Q13576 1575 aa28.24■■■□□ 2.11
LAMP3-204ENST00000476015 P3H3Q8IVL6 736 aa28.24■■■□□ 2.11
LAMP3-204ENST00000476015 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
LAMP3-204ENST00000476015 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
LAMP3-204ENST00000476015 JPH4Q96JJ6 628 aa28.18■■■□□ 2.1
LAMP3-204ENST00000476015 APLP2Q06481 763 aa28.16■■■□□ 2.1
LAMP3-204ENST00000476015 UGGT2Q9NYU1 1516 aa28.15■■■□□ 2.1
LAMP3-204ENST00000476015 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
LAMP3-204ENST00000476015 SAMD9Q5K651 1589 aa28.11■■■□□ 2.09
LAMP3-204ENST00000476015 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
LAMP3-204ENST00000476015 FMN1Q68DA7 1419 aa28.06■■■□□ 2.08
LAMP3-204ENST00000476015 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
LAMP3-204ENST00000476015 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
LAMP3-204ENST00000476015 PPARGC1BQ86YN6 1023 aaKnown RBP27.97■■■□□ 2.07
LAMP3-204ENST00000476015 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
LAMP3-204ENST00000476015 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
LAMP3-204ENST00000476015 KIAA0556O60303 1618 aa27.93■■■□□ 2.06
LAMP3-204ENST00000476015 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
LAMP3-204ENST00000476015 TRIM26Q12899 539 aaPredicted RBP27.89■■■□□ 2.06
LAMP3-204ENST00000476015 FYCO1Q9BQS8 1478 aa27.88■■■□□ 2.05
LAMP3-204ENST00000476015 MAP3K1Q13233 1512 aa27.85■■■□□ 2.05
LAMP3-204ENST00000476015 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
LAMP3-204ENST00000476015 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
LAMP3-204ENST00000476015 PCF11O94913 1555 aaKnown RBP27.82■■■□□ 2.04
LAMP3-204ENST00000476015 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
LAMP3-204ENST00000476015 PTPRGP23470 1445 aa27.77■■■□□ 2.04
LAMP3-204ENST00000476015 TIAM1Q13009 1591 aa27.73■■■□□ 2.03
LAMP3-204ENST00000476015 PCGF6Q9BYE7 350 aa27.71■■■□□ 2.03
LAMP3-204ENST00000476015 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
LAMP3-204ENST00000476015 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
LAMP3-204ENST00000476015 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
LAMP3-204ENST00000476015 LRRC9Q6ZRR7 1453 aa27.66■■■□□ 2.02
LAMP3-204ENST00000476015 RAPGEF6Q8TEU7 1601 aa27.66■■■□□ 2.02
LAMP3-204ENST00000476015 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.01
LAMP3-204ENST00000476015 EPRSP07814 1512 aaKnown RBP27.63■■■□□ 2.01
LAMP3-204ENST00000476015 CDK11AQ9UQ88 783 aaPredicted RBP27.62■■■□□ 2.01
LAMP3-204ENST00000476015 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
LAMP3-204ENST00000476015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
LAMP3-204ENST00000476015 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
LAMP3-204ENST00000476015 ABCA8O94911 1581 aa27.59■■■□□ 2.01
LAMP3-204ENST00000476015 MTUS2Q5JR59 1369 aa27.59■■■□□ 2.01
LAMP3-204ENST00000476015 NUP153P49790 1475 aaKnown RBP27.58■■■□□ 2.01
LAMP3-204ENST00000476015 UACAQ9BZF9 1416 aa27.58■■■□□ 2
LAMP3-204ENST00000476015 ARID3CA6NKF2 412 aa27.56■■■□□ 2
LAMP3-204ENST00000476015 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
LAMP3-204ENST00000476015 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
LAMP3-204ENST00000476015 PLEKHD1A6NEE1 506 aa27.48■■□□□ 1.99
LAMP3-204ENST00000476015 ATP10BO94823 1461 aa27.47■■□□□ 1.99
LAMP3-204ENST00000476015 KIF13AQ9H1H9 1805 aa27.47■■□□□ 1.99
LAMP3-204ENST00000476015 EHBP1L1Q8N3D4 1523 aa27.45■■□□□ 1.98
LAMP3-204ENST00000476015 UHRF1BP1LA0JNW5 1464 aa27.44■■□□□ 1.98
LAMP3-204ENST00000476015 ABCC2Q92887 1545 aa27.41■■□□□ 1.98
LAMP3-204ENST00000476015 MAGI3Q5TCQ9 1506 aa27.39■■□□□ 1.98
LAMP3-204ENST00000476015 PHLDB1Q86UU1 1377 aa27.36■■□□□ 1.97
LAMP3-204ENST00000476015 SUPT6HQ7KZ85 1726 aaKnown RBP27.36■■□□□ 1.97
LAMP3-204ENST00000476015 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
LAMP3-204ENST00000476015 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
LAMP3-204ENST00000476015 NCOA2Q15596 1464 aa27.36■■□□□ 1.97
LAMP3-204ENST00000476015 CCNB3Q8WWL7 1395 aa27.33■■□□□ 1.97
LAMP3-204ENST00000476015 FAM69CQ0P6D2 419 aa27.32■■□□□ 1.96
LAMP3-204ENST00000476015 NPM1P06748 294 aaKnown RBP eCLIP27.3■■□□□ 1.96
LAMP3-204ENST00000476015 KDM5BQ9UGL1 1544 aa27.29■■□□□ 1.96
LAMP3-204ENST00000476015 KDM4FA0A1W2PPD8 638 aa27.27■■□□□ 1.96
LAMP3-204ENST00000476015 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
LAMP3-204ENST00000476015 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
LAMP3-204ENST00000476015 FAM50AQ14320 339 aaKnown RBP27.24■■□□□ 1.95
LAMP3-204ENST00000476015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
LAMP3-204ENST00000476015 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
LAMP3-204ENST00000476015 ADCY10Q96PN6 1610 aa27.21■■□□□ 1.95
LAMP3-204ENST00000476015 ILDR1Q86SU0 546 aaPredicted RBP27.2■■□□□ 1.94
LAMP3-204ENST00000476015 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
LAMP3-204ENST00000476015 MIA2Q96PC5 1412 aa27.18■■□□□ 1.94
LAMP3-204ENST00000476015 KCNH8Q96L42 1107 aa27.16■■□□□ 1.94
LAMP3-204ENST00000476015 MAPKBP1O60336 1514 aa27.16■■□□□ 1.94
LAMP3-204ENST00000476015 DIP2BQ9P265 1576 aa27.15■■□□□ 1.94
LAMP3-204ENST00000476015 KIF14Q15058 1648 aa27.13■■□□□ 1.93
LAMP3-204ENST00000476015 CFDP1Q9UEE9 299 aaPredicted RBP27.13■■□□□ 1.93
LAMP3-204ENST00000476015 ITGAEP38570 1179 aa27.11■■□□□ 1.93
LAMP3-204ENST00000476015 KDM6BO15054 1643 aa27.1■■□□□ 1.93
LAMP3-204ENST00000476015 GPATCH8Q9UKJ3 1502 aaKnown RBP27.09■■□□□ 1.93
LAMP3-204ENST00000476015 TCOF1Q13428 1488 aaKnown RBP27.06■■□□□ 1.92
LAMP3-204ENST00000476015 PTPN23Q9H3S7 1636 aa27.05■■□□□ 1.92
LAMP3-204ENST00000476015 ASXL2Q76L83 1435 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms