RNA–Protein interactions for RNA: ENST00000475971.5

SUN1-229, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 1 (best)

Gene SUN1, Length 4,038 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-229ENST00000475971 IFT140Q96RY7 1462 aa13.37□□□□□ -0.27
SUN1-229ENST00000475971 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
SUN1-229ENST00000475971 SNAPC4Q5SXM2 1469 aa13.35□□□□□ -0.27
SUN1-229ENST00000475971 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
SUN1-229ENST00000475971 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
SUN1-229ENST00000475971 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
SUN1-229ENST00000475971 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
SUN1-229ENST00000475971 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
SUN1-229ENST00000475971 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
SUN1-229ENST00000475971 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
SUN1-229ENST00000475971 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
SUN1-229ENST00000475971 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
SUN1-229ENST00000475971 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
SUN1-229ENST00000475971 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.28
SUN1-229ENST00000475971 KIF21BO75037 1637 aa13.27□□□□□ -0.28
SUN1-229ENST00000475971 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
SUN1-229ENST00000475971 WDR62O43379 1518 aa13.26□□□□□ -0.29
SUN1-229ENST00000475971 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
SUN1-229ENST00000475971 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
SUN1-229ENST00000475971 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
SUN1-229ENST00000475971 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
SUN1-229ENST00000475971 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
SUN1-229ENST00000475971 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
SUN1-229ENST00000475971 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
SUN1-229ENST00000475971 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
SUN1-229ENST00000475971 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
SUN1-229ENST00000475971 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
SUN1-229ENST00000475971 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
SUN1-229ENST00000475971 EIF4G3O43432 1585 aaKnown RBP13.18□□□□□ -0.3
SUN1-229ENST00000475971 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
SUN1-229ENST00000475971 CDK11AQ9UQ88 783 aaPredicted RBP13.16□□□□□ -0.3
SUN1-229ENST00000475971 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
SUN1-229ENST00000475971 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
SUN1-229ENST00000475971 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SUN1-229ENST00000475971 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
SUN1-229ENST00000475971 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
SUN1-229ENST00000475971 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
SUN1-229ENST00000475971 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
SUN1-229ENST00000475971 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
SUN1-229ENST00000475971 PTPRGP23470 1445 aa13.11□□□□□ -0.31
SUN1-229ENST00000475971 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
SUN1-229ENST00000475971 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
SUN1-229ENST00000475971 CUL7Q14999 1698 aa13.08□□□□□ -0.32
SUN1-229ENST00000475971 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
SUN1-229ENST00000475971 TRIM52Q96A61 297 aa13.06□□□□□ -0.32
SUN1-229ENST00000475971 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
SUN1-229ENST00000475971 ADAMTS12P58397 1594 aa13.06□□□□□ -0.32
SUN1-229ENST00000475971 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
SUN1-229ENST00000475971 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
SUN1-229ENST00000475971 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
SUN1-229ENST00000475971 PLB1Q6P1J6 1458 aa13.02□□□□□ -0.32
SUN1-229ENST00000475971 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
SUN1-229ENST00000475971 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
SUN1-229ENST00000475971 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
SUN1-229ENST00000475971 CEP170Q5SW79 1584 aa12.96□□□□□ -0.33
SUN1-229ENST00000475971 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
SUN1-229ENST00000475971 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
SUN1-229ENST00000475971 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
SUN1-229ENST00000475971 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
SUN1-229ENST00000475971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■□□□ 12.4
SUN1-229ENST00000475971 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
SUN1-229ENST00000475971 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
SUN1-229ENST00000475971 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■■ 42.1
SUN1-229ENST00000475971 NUP160Q12769 1436 aa12.92□□□□□ -0.34
SUN1-229ENST00000475971 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
SUN1-229ENST00000475971 TSPY4P0CV99 314 aa12.91□□□□□ -0.34
SUN1-229ENST00000475971 TSPY10P0CW01 314 aa12.91□□□□□ -0.34
SUN1-229ENST00000475971 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
SUN1-229ENST00000475971 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
SUN1-229ENST00000475971 DISP1Q96F81 1524 aa12.9□□□□□ -0.34
SUN1-229ENST00000475971 CTTNBP2Q8WZ74 1663 aa12.9□□□□□ -0.34
SUN1-229ENST00000475971 CHD1O14646 1710 aa12.89□□□□□ -0.35
SUN1-229ENST00000475971 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
SUN1-229ENST00000475971 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
SUN1-229ENST00000475971 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
SUN1-229ENST00000475971 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
SUN1-229ENST00000475971 UACAQ9BZF9 1416 aa12.85□□□□□ -0.35
SUN1-229ENST00000475971 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
SUN1-229ENST00000475971 FOXD1Q16676 465 aa12.84□□□□□ -0.35
SUN1-229ENST00000475971 NCOA2Q15596 1464 aa12.83□□□□□ -0.35
SUN1-229ENST00000475971 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
SUN1-229ENST00000475971 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
SUN1-229ENST00000475971 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
SUN1-229ENST00000475971 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
SUN1-229ENST00000475971 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
SUN1-229ENST00000475971 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
SUN1-229ENST00000475971 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
SUN1-229ENST00000475971 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
SUN1-229ENST00000475971 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
SUN1-229ENST00000475971 ATP10BO94823 1461 aa12.78□□□□□ -0.36
SUN1-229ENST00000475971 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
SUN1-229ENST00000475971 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.36
SUN1-229ENST00000475971 MLECQ14165 292 aa12.77□□□□□ -0.37
SUN1-229ENST00000475971 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
SUN1-229ENST00000475971 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
SUN1-229ENST00000475971 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
SUN1-229ENST00000475971 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
SUN1-229ENST00000475971 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
SUN1-229ENST00000475971 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
SUN1-229ENST00000475971 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms