RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 GOLGA3Q08378 1498 aa36.48■■■■□ 3.43
MCF2L2-209ENST00000475664 SHROOM2Q13796 1616 aa36.45■■■■□ 3.43
MCF2L2-209ENST00000475664 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
MCF2L2-209ENST00000475664 IQGAP2Q13576 1575 aa36.44■■■■□ 3.42
MCF2L2-209ENST00000475664 JPH4Q96JJ6 628 aa36.32■■■■□ 3.4
MCF2L2-209ENST00000475664 EHMT2Q96KQ7 1210 aa36.32■■■■□ 3.4
MCF2L2-209ENST00000475664 ARHGEF11O15085 1522 aa36.29■■■■□ 3.4
MCF2L2-209ENST00000475664 UGGT2Q9NYU1 1516 aa36.26■■■■□ 3.4
MCF2L2-209ENST00000475664 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.39
MCF2L2-209ENST00000475664 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.39
MCF2L2-209ENST00000475664 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.39
MCF2L2-209ENST00000475664 UBTFP17480 764 aaKnown RBP36.25■■■■□ 3.39
MCF2L2-209ENST00000475664 ERCC6L2Q5T890 1561 aa36.23■■■■□ 3.39
MCF2L2-209ENST00000475664 PRG4Q92954 1404 aaPredicted RBP36.23■■■■□ 3.39
MCF2L2-209ENST00000475664 DISP1Q96F81 1524 aa36.13■■■■□ 3.38
MCF2L2-209ENST00000475664 TNIKQ9UKE5 1360 aa36.1■■■■□ 3.37
MCF2L2-209ENST00000475664 KIAA0556O60303 1618 aa36.09■■■■□ 3.37
MCF2L2-209ENST00000475664 CARMIL2Q6F5E8 1435 aa36.08■■■■□ 3.37
MCF2L2-209ENST00000475664 SAMD9Q5K651 1589 aa36.06■■■■□ 3.36
MCF2L2-209ENST00000475664 LOC105371045A0A1W2PR82 267 aa36.06■■■■□ 3.36
MCF2L2-209ENST00000475664 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
MCF2L2-209ENST00000475664 EFCAB5A4FU69 1503 aa35.98■■■■□ 3.35
MCF2L2-209ENST00000475664 RANGAP1P46060 587 aaPredicted RBP35.95■■■■□ 3.35
MCF2L2-209ENST00000475664 ARHGAP35Q9NRY4 1499 aa35.88■■■■□ 3.33
MCF2L2-209ENST00000475664 PTPRGP23470 1445 aa35.86■■■■□ 3.33
MCF2L2-209ENST00000475664 CYB5RLQ6IPT4 315 aa35.84■■■■□ 3.33
MCF2L2-209ENST00000475664 P3H3Q8IVL6 736 aa35.84■■■■□ 3.33
MCF2L2-209ENST00000475664 CLIP1P30622 1438 aa35.82■■■■□ 3.32
MCF2L2-209ENST00000475664 FHOD3Q2V2M9 1422 aa35.81■■■■□ 3.32
MCF2L2-209ENST00000475664 CEP162Q5TB80 1403 aa35.81■■■■□ 3.32
MCF2L2-209ENST00000475664 TTBK1Q5TCY1 1321 aaPredicted RBP35.75■■■■□ 3.31
MCF2L2-209ENST00000475664 ADCY10Q96PN6 1610 aa35.67■■■■□ 3.3
MCF2L2-209ENST00000475664 ABCA8O94911 1581 aa35.67■■■■□ 3.3
MCF2L2-209ENST00000475664 UACAQ9BZF9 1416 aa35.66■■■■□ 3.3
MCF2L2-209ENST00000475664 PLB1Q6P1J6 1458 aa35.65■■■■□ 3.3
MCF2L2-209ENST00000475664 ABCC2Q92887 1545 aa35.62■■■■□ 3.29
MCF2L2-209ENST00000475664 UHRF1BP1LA0JNW5 1464 aa35.62■■■■□ 3.29
MCF2L2-209ENST00000475664 FMN1Q68DA7 1419 aa35.59■■■■□ 3.29
MCF2L2-209ENST00000475664 RAPGEF6Q8TEU7 1601 aa35.58■■■■□ 3.29
MCF2L2-209ENST00000475664 KDM5BQ9UGL1 1544 aa35.46■■■■□ 3.27
MCF2L2-209ENST00000475664 PCF11O94913 1555 aaKnown RBP35.45■■■■□ 3.27
MCF2L2-209ENST00000475664 NUP153P49790 1475 aaKnown RBP35.44■■■■□ 3.26
MCF2L2-209ENST00000475664 ZCCHC11Q5TAX3 1644 aaKnown RBP35.41■■■■□ 3.26
MCF2L2-209ENST00000475664 HECW1Q76N89 1606 aa35.41■■■■□ 3.26
MCF2L2-209ENST00000475664 CASKIN1Q8WXD9 1431 aa35.4■■■■□ 3.26
MCF2L2-209ENST00000475664 FYCO1Q9BQS8 1478 aa35.36■■■■□ 3.25
MCF2L2-209ENST00000475664 NPM1P06748 294 aaKnown RBP eCLIP35.36■■■■□ 3.25
MCF2L2-209ENST00000475664 VPS8Q8N3P4 1428 aa35.34■■■■□ 3.25
MCF2L2-209ENST00000475664 ATP10BO94823 1461 aa35.34■■■■□ 3.25
MCF2L2-209ENST00000475664 LRRIQ1Q96JM4 1722 aa35.32■■■■□ 3.25
MCF2L2-209ENST00000475664 MAPKBP1O60336 1514 aa35.32■■■■□ 3.24
MCF2L2-209ENST00000475664 EPRSP07814 1512 aaKnown RBP35.28■■■■□ 3.24
MCF2L2-209ENST00000475664 ARID3CA6NKF2 412 aa35.27■■■■□ 3.24
MCF2L2-209ENST00000475664 ATP1B4Q9UN42 357 aaPredicted RBP35.25■■■■□ 3.23
MCF2L2-209ENST00000475664 CDK13Q14004 1512 aaKnown RBP35.25■■■■□ 3.23
MCF2L2-209ENST00000475664 ASXL2Q76L83 1435 aa35.21■■■■□ 3.23
MCF2L2-209ENST00000475664 CCDC18Q5T9S5 1454 aa35.21■■■■□ 3.23
MCF2L2-209ENST00000475664 WDR7Q9Y4E6 1490 aa35.14■■■■□ 3.22
MCF2L2-209ENST00000475664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.13■■■■□ 3.21
MCF2L2-209ENST00000475664 HNRNPUL2Q1KMD3 747 aaKnown RBP35.13■■■■□ 3.21
MCF2L2-209ENST00000475664 CFAP43Q8NDM7 1665 aa35.08■■■■□ 3.21
MCF2L2-209ENST00000475664 DIP2BQ9P265 1576 aa35.06■■■■□ 3.2
MCF2L2-209ENST00000475664 ABCC10Q5T3U5 1492 aa35.06■■■■□ 3.2
MCF2L2-209ENST00000475664 KIF13AQ9H1H9 1805 aa35.04■■■■□ 3.2
MCF2L2-209ENST00000475664 TIAM1Q13009 1591 aa35.02■■■■□ 3.2
MCF2L2-209ENST00000475664 PLEKHD1A6NEE1 506 aa35.01■■■■□ 3.2
MCF2L2-209ENST00000475664 MAGI3Q5TCQ9 1506 aa35■■■■□ 3.19
MCF2L2-209ENST00000475664 CDK11AQ9UQ88 783 aaPredicted RBP34.99■■■■□ 3.19
MCF2L2-209ENST00000475664 MAP3K1Q13233 1512 aa34.99■■■■□ 3.19
MCF2L2-209ENST00000475664 GLI2P10070 1586 aa34.97■■■■□ 3.19
MCF2L2-209ENST00000475664 TROQ12816 1431 aaPredicted RBP34.97■■■■□ 3.19
MCF2L2-209ENST00000475664 KCNH8Q96L42 1107 aa34.91■■■■□ 3.18
MCF2L2-209ENST00000475664 TRHP20396 242 aaPredicted RBP34.89■■■■□ 3.18
MCF2L2-209ENST00000475664 FAM69CQ0P6D2 419 aa34.89■■■■□ 3.18
MCF2L2-209ENST00000475664 KIF14Q15058 1648 aa34.88■■■■□ 3.17
MCF2L2-209ENST00000475664 EHBP1L1Q8N3D4 1523 aa34.87■■■■□ 3.17
MCF2L2-209ENST00000475664 ABCA9Q8IUA7 1624 aa34.87■■■■□ 3.17
MCF2L2-209ENST00000475664 MAP3K4Q9Y6R4 1608 aa34.85■■■■□ 3.17
MCF2L2-209ENST00000475664 MTUS2Q5JR59 1369 aa34.85■■■■□ 3.17
MCF2L2-209ENST00000475664 APLP2Q06481 763 aa34.83■■■■□ 3.17
MCF2L2-209ENST00000475664 LRRC9Q6ZRR7 1453 aa34.83■■■■□ 3.17
MCF2L2-209ENST00000475664 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.82■■■■□ 3.16
MCF2L2-209ENST00000475664 TTC37Q6PGP7 1564 aa34.8■■■■□ 3.16
MCF2L2-209ENST00000475664 KANK4Q5T7N3 995 aaPredicted RBP34.76■■■■□ 3.16
MCF2L2-209ENST00000475664 TSPOAP1O95153 1857 aa34.73■■■■□ 3.15
MCF2L2-209ENST00000475664 PPRC1Q5VV67 1664 aaKnown RBP34.73■■■■□ 3.15
MCF2L2-209ENST00000475664 SUPT6HQ7KZ85 1726 aaKnown RBP34.72■■■■□ 3.15
MCF2L2-209ENST00000475664 CD109Q6YHK3 1445 aa34.72■■■■□ 3.15
MCF2L2-209ENST00000475664 MYO5CQ9NQX4 1742 aa34.68■■■■□ 3.14
MCF2L2-209ENST00000475664 NCOA2Q15596 1464 aa34.65■■■■□ 3.14
MCF2L2-209ENST00000475664 CDC42BPAQ5VT25 1732 aa34.63■■■■□ 3.13
MCF2L2-209ENST00000475664 PREX2Q70Z35 1606 aa34.6■■■■□ 3.13
MCF2L2-209ENST00000475664 ARAP3Q8WWN8 1544 aa34.6■■■■□ 3.13
MCF2L2-209ENST00000475664 PLCH2O75038 1416 aa34.59■■■■□ 3.13
MCF2L2-209ENST00000475664 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
MCF2L2-209ENST00000475664 CDC42BPBQ9Y5S2 1711 aa34.58■■■■□ 3.13
MCF2L2-209ENST00000475664 GPATCH8Q9UKJ3 1502 aaKnown RBP34.56■■■■□ 3.12
MCF2L2-209ENST00000475664 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
MCF2L2-209ENST00000475664 CCNB3Q8WWL7 1395 aa34.54■■■■□ 3.12
MCF2L2-209ENST00000475664 CFAP74Q9C0B2 1584 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms