RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 ITGAEP38570 1179 aa20.98■□□□□ 0.95
UBXN11-214ENST00000475591 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
UBXN11-214ENST00000475591 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
UBXN11-214ENST00000475591 ATP1B4Q9UN42 357 aaPredicted RBP20.96■□□□□ 0.95
UBXN11-214ENST00000475591 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
UBXN11-214ENST00000475591 LRRC9Q6ZRR7 1453 aa20.93■□□□□ 0.94
UBXN11-214ENST00000475591 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
UBXN11-214ENST00000475591 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
UBXN11-214ENST00000475591 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
UBXN11-214ENST00000475591 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
UBXN11-214ENST00000475591 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
UBXN11-214ENST00000475591 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.94
UBXN11-214ENST00000475591 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
UBXN11-214ENST00000475591 CFAP43Q8NDM7 1665 aa20.87■□□□□ 0.93
UBXN11-214ENST00000475591 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.92
UBXN11-214ENST00000475591 FYCO1Q9BQS8 1478 aa20.82■□□□□ 0.92
UBXN11-214ENST00000475591 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
UBXN11-214ENST00000475591 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
UBXN11-214ENST00000475591 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
UBXN11-214ENST00000475591 RAB3GAP2Q9H2M9 1393 aa20.77■□□□□ 0.92
UBXN11-214ENST00000475591 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.92
UBXN11-214ENST00000475591 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.914e-14■■■■■ 52.8
UBXN11-214ENST00000475591 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
UBXN11-214ENST00000475591 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
UBXN11-214ENST00000475591 SAMD9Q5K651 1589 aa20.74■□□□□ 0.91
UBXN11-214ENST00000475591 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
UBXN11-214ENST00000475591 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
UBXN11-214ENST00000475591 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
UBXN11-214ENST00000475591 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
UBXN11-214ENST00000475591 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
UBXN11-214ENST00000475591 MIER1Q8N108 512 aa20.66■□□□□ 0.9
UBXN11-214ENST00000475591 ACIN1Q9UKV3 1341 aaKnown RBP20.66■□□□□ 0.9
UBXN11-214ENST00000475591 MAPKBP1O60336 1514 aa20.65■□□□□ 0.9
UBXN11-214ENST00000475591 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.9
UBXN11-214ENST00000475591 GRIN2BQ13224 1484 aa20.64■□□□□ 0.89
UBXN11-214ENST00000475591 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
UBXN11-214ENST00000475591 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
UBXN11-214ENST00000475591 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
UBXN11-214ENST00000475591 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
UBXN11-214ENST00000475591 IQGAP2Q13576 1575 aa20.57■□□□□ 0.88
UBXN11-214ENST00000475591 WDR62O43379 1518 aa20.55■□□□□ 0.88
UBXN11-214ENST00000475591 NCOA2Q15596 1464 aa20.55■□□□□ 0.88
UBXN11-214ENST00000475591 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
UBXN11-214ENST00000475591 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
UBXN11-214ENST00000475591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
UBXN11-214ENST00000475591 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
UBXN11-214ENST00000475591 SIN3AQ96ST3 1273 aa20.53■□□□□ 0.88
UBXN11-214ENST00000475591 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
UBXN11-214ENST00000475591 PTPRKQ15262 1439 aa20.52■□□□□ 0.87
UBXN11-214ENST00000475591 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
UBXN11-214ENST00000475591 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
UBXN11-214ENST00000475591 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
UBXN11-214ENST00000475591 SUPT6HQ7KZ85 1726 aaKnown RBP20.48■□□□□ 0.87
UBXN11-214ENST00000475591 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
UBXN11-214ENST00000475591 CDK13Q14004 1512 aaKnown RBP20.45■□□□□ 0.86
UBXN11-214ENST00000475591 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
UBXN11-214ENST00000475591 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
UBXN11-214ENST00000475591 UGGT2Q9NYU1 1516 aa20.45■□□□□ 0.86
UBXN11-214ENST00000475591 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
UBXN11-214ENST00000475591 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
UBXN11-214ENST00000475591 GTF3C3Q9Y5Q9 886 aa20.43■□□□□ 0.86
UBXN11-214ENST00000475591 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
UBXN11-214ENST00000475591 PTPN23Q9H3S7 1636 aa20.4■□□□□ 0.86
UBXN11-214ENST00000475591 HFM1A2PYH4 1435 aa20.39■□□□□ 0.86
UBXN11-214ENST00000475591 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
UBXN11-214ENST00000475591 KIAA0586Q9BVV6 1533 aa20.38■□□□□ 0.85
UBXN11-214ENST00000475591 DISP1Q96F81 1524 aa20.38■□□□□ 0.85
UBXN11-214ENST00000475591 NAIPQ13075 1403 aa20.37■□□□□ 0.85
UBXN11-214ENST00000475591 KIAA0556O60303 1618 aa20.36■□□□□ 0.85
UBXN11-214ENST00000475591 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
UBXN11-214ENST00000475591 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
UBXN11-214ENST00000475591 FBLN2P98095 1184 aa20.31■□□□□ 0.84
UBXN11-214ENST00000475591 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
UBXN11-214ENST00000475591 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
UBXN11-214ENST00000475591 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
UBXN11-214ENST00000475591 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
UBXN11-214ENST00000475591 CEP170Q5SW79 1584 aa20.28■□□□□ 0.84
UBXN11-214ENST00000475591 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
UBXN11-214ENST00000475591 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
UBXN11-214ENST00000475591 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
UBXN11-214ENST00000475591 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
UBXN11-214ENST00000475591 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
UBXN11-214ENST00000475591 KDM6BO15054 1643 aa20.23■□□□□ 0.83
UBXN11-214ENST00000475591 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
UBXN11-214ENST00000475591 MIA2Q96PC5 1412 aa20.22■□□□□ 0.83
UBXN11-214ENST00000475591 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
UBXN11-214ENST00000475591 PLB1Q6P1J6 1458 aa20.2■□□□□ 0.82
UBXN11-214ENST00000475591 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
UBXN11-214ENST00000475591 GCC2Q8IWJ2 1684 aa20.19■□□□□ 0.82
UBXN11-214ENST00000475591 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
UBXN11-214ENST00000475591 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
UBXN11-214ENST00000475591 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
UBXN11-214ENST00000475591 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
UBXN11-214ENST00000475591 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
UBXN11-214ENST00000475591 NUP160Q12769 1436 aa20.15■□□□□ 0.82
UBXN11-214ENST00000475591 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
UBXN11-214ENST00000475591 DAPK1P53355 1430 aa20.13■□□□□ 0.81
UBXN11-214ENST00000475591 AKNAQ7Z591 1439 aa20.13■□□□□ 0.81
UBXN11-214ENST00000475591 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
UBXN11-214ENST00000475591 ABCC5O15440 1437 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms