RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 FGD5Q6ZNL6 1462 aa8.07□□□□□ -1.12
CBWD1-212ENST00000475411 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
CBWD1-212ENST00000475411 ZEB1P37275 1124 aaPredicted RBP8.05□□□□□ -1.12
CBWD1-212ENST00000475411 PPARGC1BQ86YN6 1023 aaKnown RBP8.04□□□□□ -1.12
CBWD1-212ENST00000475411 RAPGEF2Q9Y4G8 1499 aa8.04□□□□□ -1.12
CBWD1-212ENST00000475411 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
CBWD1-212ENST00000475411 PEG3Q9GZU2 1588 aa8.04□□□□□ -1.12
CBWD1-212ENST00000475411 PTPRGP23470 1445 aa8.02□□□□□ -1.12
CBWD1-212ENST00000475411 TOPBP1Q92547 1522 aa8.02□□□□□ -1.13
CBWD1-212ENST00000475411 CFDP1Q9UEE9 299 aaPredicted RBP8.02□□□□□ -1.13
CBWD1-212ENST00000475411 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
CBWD1-212ENST00000475411 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
CBWD1-212ENST00000475411 SLC4A1APQ9BWU0 796 aaKnown RBP8□□□□□ -1.13
CBWD1-212ENST00000475411 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
CBWD1-212ENST00000475411 EFCAB2Q5VUJ9 269 aa7.99□□□□□ -1.13
CBWD1-212ENST00000475411 AQRO60306 1485 aaKnown RBP eCLIP7.99□□□□□ -1.13
CBWD1-212ENST00000475411 TRIM26Q12899 539 aaPredicted RBP7.99□□□□□ -1.13
CBWD1-212ENST00000475411 RAD54L2Q9Y4B4 1467 aa7.98□□□□□ -1.13
CBWD1-212ENST00000475411 PPP1R15AO75807 674 aaPredicted RBP7.98□□□□□ -1.13
CBWD1-212ENST00000475411 TNIKQ9UKE5 1360 aa7.97□□□□□ -1.13
CBWD1-212ENST00000475411 KANK1Q14678 1352 aa7.96□□□□□ -1.14
CBWD1-212ENST00000475411 HDGFP51858 240 aaKnown RBP7.95□□□□□ -1.14
CBWD1-212ENST00000475411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.95□□□□□ -1.14
CBWD1-212ENST00000475411 SYNJ1O43426 1573 aa7.95□□□□□ -1.14
CBWD1-212ENST00000475411 MAGI1Q96QZ7 1491 aaPredicted RBP7.95□□□□□ -1.14
CBWD1-212ENST00000475411 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
CBWD1-212ENST00000475411 SNAPC4Q5SXM2 1469 aa7.95□□□□□ -1.14
CBWD1-212ENST00000475411 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
CBWD1-212ENST00000475411 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
CBWD1-212ENST00000475411 C14orf37Q86TY3 774 aa7.92□□□□□ -1.14
CBWD1-212ENST00000475411 CEP162Q5TB80 1403 aa7.92□□□□□ -1.14
CBWD1-212ENST00000475411 SYNJ2O15056 1496 aa7.92□□□□□ -1.14
CBWD1-212ENST00000475411 SENP3Q9H4L4 574 aaPredicted RBP7.91□□□□□ -1.14
CBWD1-212ENST00000475411 CCDC18Q5T9S5 1454 aa7.91□□□□□ -1.14
CBWD1-212ENST00000475411 PRG4Q92954 1404 aaPredicted RBP7.91□□□□□ -1.14
CBWD1-212ENST00000475411 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
CBWD1-212ENST00000475411 RSPH4AQ5TD94 716 aa7.9□□□□□ -1.14
CBWD1-212ENST00000475411 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.15
CBWD1-212ENST00000475411 MLECQ14165 292 aa7.9□□□□□ -1.15
CBWD1-212ENST00000475411 PHF23Q9BUL5 403 aaPredicted RBP7.89□□□□□ -1.15
CBWD1-212ENST00000475411 CHIC2Q9UKJ5 165 aa7.88□□□□□ -1.15
CBWD1-212ENST00000475411 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
CBWD1-212ENST00000475411 TOP2BQ02880 1626 aa7.87□□□□□ -1.15
CBWD1-212ENST00000475411 IGF1RP08069 1367 aa7.87□□□□□ -1.15
CBWD1-212ENST00000475411 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
CBWD1-212ENST00000475411 CUX1P39880 1505 aa7.85□□□□□ -1.15
CBWD1-212ENST00000475411 SPAG9O60271 1321 aaKnown RBP7.85□□□□□ -1.15
CBWD1-212ENST00000475411 ERICH3Q5RHP9 1530 aa7.84□□□□□ -1.15
CBWD1-212ENST00000475411 KIAA0586Q9BVV6 1533 aa7.84□□□□□ -1.15
CBWD1-212ENST00000475411 NEFMP07197 916 aa7.84□□□□□ -1.16
CBWD1-212ENST00000475411 WDR62O43379 1518 aa7.84□□□□□ -1.16
CBWD1-212ENST00000475411 FHOD3Q2V2M9 1422 aa7.83□□□□□ -1.16
CBWD1-212ENST00000475411 CUL7Q14999 1698 aa7.83□□□□□ -1.16
CBWD1-212ENST00000475411 POGZQ7Z3K3 1410 aa7.83□□□□□ -1.16
CBWD1-212ENST00000475411 GRIN2AQ12879 1464 aa7.82□□□□□ -1.16
CBWD1-212ENST00000475411 ARHGAP35Q9NRY4 1499 aa7.82□□□□□ -1.16
CBWD1-212ENST00000475411 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
CBWD1-212ENST00000475411 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
CBWD1-212ENST00000475411 GGT6Q6P531 493 aa7.82□□□□□ -1.16
CBWD1-212ENST00000475411 EID1Q9Y6B2 187 aa7.8□□□□□ -1.16
CBWD1-212ENST00000475411 PRDM2Q13029 1718 aa7.8□□□□□ -1.16
CBWD1-212ENST00000475411 ANKRD30AQ9BXX3 1397 aa7.8□□□□□ -1.16
CBWD1-212ENST00000475411 WDR97A6NE52 1622 aa7.8□□□□□ -1.16
CBWD1-212ENST00000475411 VPS8Q8N3P4 1428 aa7.79□□□□□ -1.16
CBWD1-212ENST00000475411 TONSLQ96HA7 1378 aa7.79□□□□□ -1.16
CBWD1-212ENST00000475411 RRP7BPQ9NSQ0 103 aa7.79□□□□□ -1.16
CBWD1-212ENST00000475411 KIF21AQ7Z4S6 1674 aa7.79□□□□□ -1.16
CBWD1-212ENST00000475411 SCAF1Q9H7N4 1312 aaKnown RBP7.79□□□□□ -1.16
CBWD1-212ENST00000475411 EFCAB5A4FU69 1503 aa7.79□□□□□ -1.16
CBWD1-212ENST00000475411 UACAQ9BZF9 1416 aa7.78□□□□□ -1.16
CBWD1-212ENST00000475411 IQGAP2Q13576 1575 aa7.77□□□□□ -1.17
CBWD1-212ENST00000475411 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-212ENST00000475411 PLEKHH2Q8IVE3 1493 aa7.76□□□□□ -1.17
CBWD1-212ENST00000475411 WASHC2CQ9Y4E1 1318 aa7.75□□□□□ -1.17
CBWD1-212ENST00000475411 PLB1Q6P1J6 1458 aa7.75□□□□□ -1.17
CBWD1-212ENST00000475411 TEX14Q8IWB6 1497 aa7.75□□□□□ -1.17
CBWD1-212ENST00000475411 KIF3BO15066 747 aa7.75□□□□□ -1.17
CBWD1-212ENST00000475411 SLC24A1O60721 1099 aa7.73□□□□□ -1.17
CBWD1-212ENST00000475411 HRCP23327 699 aa7.73□□□□□ -1.17
CBWD1-212ENST00000475411 BIVM-ERCC5R4GMW8 1640 aa7.72□□□□□ -1.17
CBWD1-212ENST00000475411 NEFLP07196 543 aa7.72□□□□□ -1.17
CBWD1-212ENST00000475411 POGKQ9P215 609 aa7.72□□□□□ -1.17
CBWD1-212ENST00000475411 EIF4G3O43432 1585 aaKnown RBP7.72□□□□□ -1.17
CBWD1-212ENST00000475411 ARHGAP5Q13017 1502 aa7.72□□□□□ -1.17
CBWD1-212ENST00000475411 HECW1Q76N89 1606 aa7.71□□□□□ -1.17
CBWD1-212ENST00000475411 KIF21BO75037 1637 aa7.71□□□□□ -1.18
CBWD1-212ENST00000475411 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
CBWD1-212ENST00000475411 HNRNPMP52272 730 aaKnown RBP eCLIP7.7□□□□□ -1.18
CBWD1-212ENST00000475411 DNAJC5Q9H3Z4 198 aa7.7□□□□□ -1.18
CBWD1-212ENST00000475411 PHLDB1Q86UU1 1377 aa7.69□□□□□ -1.18
CBWD1-212ENST00000475411 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
CBWD1-212ENST00000475411 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
CBWD1-212ENST00000475411 CASKIN1Q8WXD9 1431 aa7.68□□□□□ -1.18
CBWD1-212ENST00000475411 GLIPR1L2Q4G1C9 344 aa7.68□□□□□ -1.18
CBWD1-212ENST00000475411 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
CBWD1-212ENST00000475411 RUSC2Q8N2Y8 1516 aa7.67□□□□□ -1.18
CBWD1-212ENST00000475411 FYCO1Q9BQS8 1478 aa7.67□□□□□ -1.18
CBWD1-212ENST00000475411 PRXQ9BXM0 1461 aa7.67□□□□□ -1.18
CBWD1-212ENST00000475411 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.67□□□□□ -1.18
CBWD1-212ENST00000475411 MYOM3Q5VTT5 1437 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms