RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
PCCB-213ENST00000475214 IGF1RP08069 1367 aa16.2■□□□□ 0.18
PCCB-213ENST00000475214 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
PCCB-213ENST00000475214 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
PCCB-213ENST00000475214 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
PCCB-213ENST00000475214 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
PCCB-213ENST00000475214 CUL7Q14999 1698 aa16.1■□□□□ 0.17
PCCB-213ENST00000475214 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
PCCB-213ENST00000475214 CLIP1P30622 1438 aa16.08■□□□□ 0.16
PCCB-213ENST00000475214 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
PCCB-213ENST00000475214 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
PCCB-213ENST00000475214 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
PCCB-213ENST00000475214 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
PCCB-213ENST00000475214 NUP160Q12769 1436 aa15.98■□□□□ 0.15
PCCB-213ENST00000475214 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
PCCB-213ENST00000475214 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
PCCB-213ENST00000475214 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
PCCB-213ENST00000475214 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
PCCB-213ENST00000475214 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
PCCB-213ENST00000475214 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
PCCB-213ENST00000475214 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
PCCB-213ENST00000475214 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
PCCB-213ENST00000475214 APLP2Q06481 763 aa15.87■□□□□ 0.13
PCCB-213ENST00000475214 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
PCCB-213ENST00000475214 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
PCCB-213ENST00000475214 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
PCCB-213ENST00000475214 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
PCCB-213ENST00000475214 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
PCCB-213ENST00000475214 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
PCCB-213ENST00000475214 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCCB-213ENST00000475214 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
PCCB-213ENST00000475214 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
PCCB-213ENST00000475214 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
PCCB-213ENST00000475214 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
PCCB-213ENST00000475214 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
PCCB-213ENST00000475214 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
PCCB-213ENST00000475214 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
PCCB-213ENST00000475214 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
PCCB-213ENST00000475214 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
PCCB-213ENST00000475214 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
PCCB-213ENST00000475214 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
PCCB-213ENST00000475214 FAM69CQ0P6D2 419 aa15.66■□□□□ 0.1
PCCB-213ENST00000475214 ADCY10Q96PN6 1610 aa15.65■□□□□ 0.1
PCCB-213ENST00000475214 CASKIN1Q8WXD9 1431 aa15.65■□□□□ 0.1
PCCB-213ENST00000475214 PCF11O94913 1555 aaKnown RBP15.65■□□□□ 0.1
PCCB-213ENST00000475214 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
PCCB-213ENST00000475214 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
PCCB-213ENST00000475214 PTPRGP23470 1445 aa15.63■□□□□ 0.09
PCCB-213ENST00000475214 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
PCCB-213ENST00000475214 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
PCCB-213ENST00000475214 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
PCCB-213ENST00000475214 CFAP43Q8NDM7 1665 aa15.59■□□□□ 0.09
PCCB-213ENST00000475214 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
PCCB-213ENST00000475214 DISP1Q96F81 1524 aa15.56■□□□□ 0.08
PCCB-213ENST00000475214 KDM6BO15054 1643 aa15.56■□□□□ 0.08
PCCB-213ENST00000475214 LRRC9Q6ZRR7 1453 aa15.55■□□□□ 0.08
PCCB-213ENST00000475214 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
PCCB-213ENST00000475214 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
PCCB-213ENST00000475214 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
PCCB-213ENST00000475214 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
PCCB-213ENST00000475214 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
PCCB-213ENST00000475214 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
PCCB-213ENST00000475214 HRCP23327 699 aa15.5■□□□□ 0.07
PCCB-213ENST00000475214 KDM4FA0A1W2PPD8 638 aa15.49■□□□□ 0.07
PCCB-213ENST00000475214 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
PCCB-213ENST00000475214 LRRIQ1Q96JM4 1722 aa15.47■□□□□ 0.07
PCCB-213ENST00000475214 RRBP1Q9P2E9 1410 aaKnown RBP15.46■□□□□ 0.07
PCCB-213ENST00000475214 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
PCCB-213ENST00000475214 RAPGEF6Q8TEU7 1601 aa15.45■□□□□ 0.06
PCCB-213ENST00000475214 ASXL2Q76L83 1435 aa15.44■□□□□ 0.06
PCCB-213ENST00000475214 EPRSP07814 1512 aaKnown RBP15.44■□□□□ 0.06
PCCB-213ENST00000475214 GLI2P10070 1586 aa15.44■□□□□ 0.06
PCCB-213ENST00000475214 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
PCCB-213ENST00000475214 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
PCCB-213ENST00000475214 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
PCCB-213ENST00000475214 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
PCCB-213ENST00000475214 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
PCCB-213ENST00000475214 PHLDB1Q86UU1 1377 aa15.39■□□□□ 0.05
PCCB-213ENST00000475214 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
PCCB-213ENST00000475214 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
PCCB-213ENST00000475214 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
PCCB-213ENST00000475214 NUP153P49790 1475 aaKnown RBP15.38■□□□□ 0.05
PCCB-213ENST00000475214 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
PCCB-213ENST00000475214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
PCCB-213ENST00000475214 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
PCCB-213ENST00000475214 ABCA8O94911 1581 aa15.35■□□□□ 0.05
PCCB-213ENST00000475214 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
PCCB-213ENST00000475214 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
PCCB-213ENST00000475214 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
PCCB-213ENST00000475214 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
PCCB-213ENST00000475214 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.05
PCCB-213ENST00000475214 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
PCCB-213ENST00000475214 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.04
PCCB-213ENST00000475214 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
PCCB-213ENST00000475214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCCB-213ENST00000475214 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
PCCB-213ENST00000475214 FAM50AQ14320 339 aaKnown RBP15.31■□□□□ 0.04
PCCB-213ENST00000475214 MYOM3Q5VTT5 1437 aa15.3■□□□□ 0.04
PCCB-213ENST00000475214 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
PCCB-213ENST00000475214 ITGAEP38570 1179 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms