RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 KIAA0586Q9BVV6 1533 aa33.23■■■□□ 2.91
NPM3-204ENST00000474993 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
NPM3-204ENST00000474993 TNIKQ9UKE5 1360 aa33.21■■■□□ 2.91
NPM3-204ENST00000474993 CTTNBP2Q8WZ74 1663 aa33.13■■■□□ 2.89
NPM3-204ENST00000474993 IQGAP2Q13576 1575 aa33.1■■■□□ 2.89
NPM3-204ENST00000474993 DNAJC5Q9H3Z4 198 aa33.07■■■□□ 2.88
NPM3-204ENST00000474993 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.88
NPM3-204ENST00000474993 JPH4Q96JJ6 628 aa33.05■■■□□ 2.88
NPM3-204ENST00000474993 UGGT2Q9NYU1 1516 aa32.96■■■□□ 2.87
NPM3-204ENST00000474993 RANGAP1P46060 587 aaPredicted RBP32.94■■■□□ 2.86
NPM3-204ENST00000474993 CARMIL2Q6F5E8 1435 aa32.91■■■□□ 2.86
NPM3-204ENST00000474993 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
NPM3-204ENST00000474993 CLIP1P30622 1438 aa32.89■■■□□ 2.86
NPM3-204ENST00000474993 CEP162Q5TB80 1403 aa32.89■■■□□ 2.86
NPM3-204ENST00000474993 PRG4Q92954 1404 aaPredicted RBP32.88■■■□□ 2.85
NPM3-204ENST00000474993 EFCAB5A4FU69 1503 aa32.86■■■□□ 2.85
NPM3-204ENST00000474993 DISP1Q96F81 1524 aa32.78■■■□□ 2.84
NPM3-204ENST00000474993 SAMD9Q5K651 1589 aa32.77■■■□□ 2.84
NPM3-204ENST00000474993 ARHGAP35Q9NRY4 1499 aa32.75■■■□□ 2.83
NPM3-204ENST00000474993 KIAA0556O60303 1618 aa32.74■■■□□ 2.83
NPM3-204ENST00000474993 P3H3Q8IVL6 736 aa32.74■■■□□ 2.83
NPM3-204ENST00000474993 FHOD3Q2V2M9 1422 aa32.65■■■□□ 2.82
NPM3-204ENST00000474993 ARHGEF11O15085 1522 aa32.63■■■□□ 2.81
NPM3-204ENST00000474993 PTPRGP23470 1445 aa32.63■■■□□ 2.81
NPM3-204ENST00000474993 ERCC6L2Q5T890 1561 aa32.62■■■□□ 2.81
NPM3-204ENST00000474993 FMN1Q68DA7 1419 aa32.6■■■□□ 2.81
NPM3-204ENST00000474993 ARAP1Q96P48 1450 aa32.6■■■□□ 2.81
NPM3-204ENST00000474993 TTBK1Q5TCY1 1321 aaPredicted RBP32.56■■■□□ 2.8
NPM3-204ENST00000474993 RIMBP3CA6NJZ7 1639 aa32.51■■■□□ 2.79
NPM3-204ENST00000474993 RIMBP3BA6NNM3 1639 aa32.51■■■□□ 2.79
NPM3-204ENST00000474993 RIMBP3Q9UFD9 1639 aa32.51■■■□□ 2.79
NPM3-204ENST00000474993 VPS8Q8N3P4 1428 aa32.47■■■□□ 2.79
NPM3-204ENST00000474993 UACAQ9BZF9 1416 aa32.41■■■□□ 2.78
NPM3-204ENST00000474993 CASKIN1Q8WXD9 1431 aa32.38■■■□□ 2.77
NPM3-204ENST00000474993 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
NPM3-204ENST00000474993 PLB1Q6P1J6 1458 aa32.35■■■□□ 2.77
NPM3-204ENST00000474993 ATP1B4Q9UN42 357 aaPredicted RBP32.35■■■□□ 2.77
NPM3-204ENST00000474993 ABCA8O94911 1581 aa32.34■■■□□ 2.77
NPM3-204ENST00000474993 FYCO1Q9BQS8 1478 aa32.34■■■□□ 2.77
NPM3-204ENST00000474993 RAPGEF6Q8TEU7 1601 aa32.33■■■□□ 2.77
NPM3-204ENST00000474993 UHRF1BP1LA0JNW5 1464 aa32.33■■■□□ 2.77
NPM3-204ENST00000474993 ABCC2Q92887 1545 aa32.3■■■□□ 2.76
NPM3-204ENST00000474993 APLP2Q06481 763 aa32.28■■■□□ 2.76
NPM3-204ENST00000474993 HECW1Q76N89 1606 aa32.28■■■□□ 2.76
NPM3-204ENST00000474993 PCF11O94913 1555 aaKnown RBP32.27■■■□□ 2.76
NPM3-204ENST00000474993 NPM1P06748 294 aaKnown RBP eCLIP32.23■■■□□ 2.75
NPM3-204ENST00000474993 NUP153P49790 1475 aaKnown RBP32.22■■■□□ 2.75
NPM3-204ENST00000474993 CCDC18Q5T9S5 1454 aa32.2■■■□□ 2.75
NPM3-204ENST00000474993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.17■■■□□ 2.74
NPM3-204ENST00000474993 HNRNPUL2Q1KMD3 747 aaKnown RBP32.17■■■□□ 2.74
NPM3-204ENST00000474993 ADCY10Q96PN6 1610 aa32.17■■■□□ 2.74
NPM3-204ENST00000474993 EPRSP07814 1512 aaKnown RBP32.16■■■□□ 2.74
NPM3-204ENST00000474993 CDK11AQ9UQ88 783 aaPredicted RBP32.15■■■□□ 2.74
NPM3-204ENST00000474993 KDM5BQ9UGL1 1544 aa32.14■■■□□ 2.74
NPM3-204ENST00000474993 ATP10BO94823 1461 aa32.12■■■□□ 2.73
NPM3-204ENST00000474993 ARID3CA6NKF2 412 aa32.12■■■□□ 2.73
NPM3-204ENST00000474993 MAP3K1Q13233 1512 aa32.1■■■□□ 2.73
NPM3-204ENST00000474993 PLEKHD1A6NEE1 506 aa32.05■■■□□ 2.72
NPM3-204ENST00000474993 CDK13Q14004 1512 aaKnown RBP32.04■■■□□ 2.72
NPM3-204ENST00000474993 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
NPM3-204ENST00000474993 ZCCHC11Q5TAX3 1644 aaKnown RBP32.01■■■□□ 2.72
NPM3-204ENST00000474993 CFAP43Q8NDM7 1665 aa31.97■■■□□ 2.71
NPM3-204ENST00000474993 LRRIQ1Q96JM4 1722 aa31.97■■■□□ 2.71
NPM3-204ENST00000474993 MTUS2Q5JR59 1369 aa31.96■■■□□ 2.71
NPM3-204ENST00000474993 LRRC9Q6ZRR7 1453 aa31.91■■■□□ 2.7
NPM3-204ENST00000474993 TROQ12816 1431 aaPredicted RBP31.9■■■□□ 2.7
NPM3-204ENST00000474993 ASXL2Q76L83 1435 aa31.9■■■□□ 2.7
NPM3-204ENST00000474993 MAPKBP1O60336 1514 aa31.9■■■□□ 2.7
NPM3-204ENST00000474993 EHBP1L1Q8N3D4 1523 aa31.87■■■□□ 2.69
NPM3-204ENST00000474993 WDR7Q9Y4E6 1490 aa31.87■■■□□ 2.69
NPM3-204ENST00000474993 KANK4Q5T7N3 995 aaPredicted RBP31.87■■■□□ 2.69
NPM3-204ENST00000474993 KCNH8Q96L42 1107 aa31.8■■■□□ 2.68
NPM3-204ENST00000474993 MAGI3Q5TCQ9 1506 aa31.8■■■□□ 2.68
NPM3-204ENST00000474993 KIF14Q15058 1648 aa31.74■■■□□ 2.67
NPM3-204ENST00000474993 PPARGC1BQ86YN6 1023 aaKnown RBP31.73■■■□□ 2.67
NPM3-204ENST00000474993 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
NPM3-204ENST00000474993 NCOA2Q15596 1464 aa31.67■■■□□ 2.66
NPM3-204ENST00000474993 ABCC10Q5T3U5 1492 aa31.66■■■□□ 2.66
NPM3-204ENST00000474993 CCNB3Q8WWL7 1395 aa31.64■■■□□ 2.66
NPM3-204ENST00000474993 FAM69CQ0P6D2 419 aa31.62■■■□□ 2.65
NPM3-204ENST00000474993 GLI2P10070 1586 aa31.6■■■□□ 2.65
NPM3-204ENST00000474993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.59■■■□□ 2.65
NPM3-204ENST00000474993 ABCA9Q8IUA7 1624 aa31.57■■■□□ 2.64
NPM3-204ENST00000474993 DIP2BQ9P265 1576 aa31.56■■■□□ 2.64
NPM3-204ENST00000474993 CD109Q6YHK3 1445 aa31.53■■■□□ 2.64
NPM3-204ENST00000474993 MYOM3Q5VTT5 1437 aa31.52■■■□□ 2.64
NPM3-204ENST00000474993 PHLDB1Q86UU1 1377 aa31.52■■■□□ 2.64
NPM3-204ENST00000474993 TTC37Q6PGP7 1564 aa31.51■■■□□ 2.64
NPM3-204ENST00000474993 GPATCH8Q9UKJ3 1502 aaKnown RBP31.51■■■□□ 2.63
NPM3-204ENST00000474993 PLCH2O75038 1416 aa31.5■■■□□ 2.63
NPM3-204ENST00000474993 TRHP20396 242 aaPredicted RBP31.5■■■□□ 2.63
NPM3-204ENST00000474993 CFDP1Q9UEE9 299 aaPredicted RBP31.5■■■□□ 2.63
NPM3-204ENST00000474993 MIA2Q96PC5 1412 aa31.48■■■□□ 2.63
NPM3-204ENST00000474993 ITSN2Q9NZM3 1697 aa31.47■■■□□ 2.63
NPM3-204ENST00000474993 ARAP3Q8WWN8 1544 aa31.46■■■□□ 2.63
NPM3-204ENST00000474993 EFCAB2Q5VUJ9 269 aa31.46■■■□□ 2.63
NPM3-204ENST00000474993 MYO5CQ9NQX4 1742 aa31.44■■■□□ 2.62
NPM3-204ENST00000474993 MAP3K4Q9Y6R4 1608 aa31.42■■■□□ 2.62
NPM3-204ENST00000474993 FGD6Q6ZV73 1430 aa31.41■■■□□ 2.62
NPM3-204ENST00000474993 ARHGAP5Q13017 1502 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms