RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
RNF220-211ENST00000474956 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
RNF220-211ENST00000474956 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
RNF220-211ENST00000474956 PCF11O94913 1555 aaKnown RBP18.5■□□□□ 0.55
RNF220-211ENST00000474956 TIAM1Q13009 1591 aa18.49■□□□□ 0.55
RNF220-211ENST00000474956 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
RNF220-211ENST00000474956 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
RNF220-211ENST00000474956 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
RNF220-211ENST00000474956 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
RNF220-211ENST00000474956 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
RNF220-211ENST00000474956 GTF3C3Q9Y5Q9 886 aa18.44■□□□□ 0.54
RNF220-211ENST00000474956 CUL7Q14999 1698 aa18.44■□□□□ 0.54
RNF220-211ENST00000474956 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
RNF220-211ENST00000474956 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.54
RNF220-211ENST00000474956 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
RNF220-211ENST00000474956 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
RNF220-211ENST00000474956 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
RNF220-211ENST00000474956 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.54
RNF220-211ENST00000474956 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.54
RNF220-211ENST00000474956 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
RNF220-211ENST00000474956 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
RNF220-211ENST00000474956 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
RNF220-211ENST00000474956 ARID3CA6NKF2 412 aa18.33■□□□□ 0.53
RNF220-211ENST00000474956 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
RNF220-211ENST00000474956 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
RNF220-211ENST00000474956 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
RNF220-211ENST00000474956 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
RNF220-211ENST00000474956 EFCAB5A4FU69 1503 aa18.3■□□□□ 0.52
RNF220-211ENST00000474956 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
RNF220-211ENST00000474956 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
RNF220-211ENST00000474956 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
RNF220-211ENST00000474956 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
RNF220-211ENST00000474956 SAMD9Q5K651 1589 aa18.26■□□□□ 0.51
RNF220-211ENST00000474956 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
RNF220-211ENST00000474956 MIER1Q8N108 512 aa18.21■□□□□ 0.51
RNF220-211ENST00000474956 MTUS2Q5JR59 1369 aa18.2■□□□□ 0.5
RNF220-211ENST00000474956 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
RNF220-211ENST00000474956 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
RNF220-211ENST00000474956 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
RNF220-211ENST00000474956 MYT1Q01538 1121 aa18.18■□□□□ 0.5
RNF220-211ENST00000474956 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
RNF220-211ENST00000474956 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
RNF220-211ENST00000474956 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
RNF220-211ENST00000474956 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
RNF220-211ENST00000474956 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
RNF220-211ENST00000474956 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
RNF220-211ENST00000474956 WDR62O43379 1518 aa18.14■□□□□ 0.49
RNF220-211ENST00000474956 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
RNF220-211ENST00000474956 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
RNF220-211ENST00000474956 CLSPNQ9HAW4 1339 aa18.12■□□□□ 0.49
RNF220-211ENST00000474956 NCOA2Q15596 1464 aa18.11■□□□□ 0.49
RNF220-211ENST00000474956 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
RNF220-211ENST00000474956 FBLN2P98095 1184 aa18.11■□□□□ 0.49
RNF220-211ENST00000474956 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
RNF220-211ENST00000474956 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
RNF220-211ENST00000474956 CHIC2Q9UKJ5 165 aa18.06■□□□□ 0.48
RNF220-211ENST00000474956 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
RNF220-211ENST00000474956 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
RNF220-211ENST00000474956 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.48
RNF220-211ENST00000474956 RRP7BPQ9NSQ0 103 aa18.01■□□□□ 0.47
RNF220-211ENST00000474956 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
RNF220-211ENST00000474956 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
RNF220-211ENST00000474956 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
RNF220-211ENST00000474956 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
RNF220-211ENST00000474956 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
RNF220-211ENST00000474956 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
RNF220-211ENST00000474956 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
RNF220-211ENST00000474956 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
RNF220-211ENST00000474956 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
RNF220-211ENST00000474956 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
RNF220-211ENST00000474956 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
RNF220-211ENST00000474956 KIAA0556O60303 1618 aa17.96■□□□□ 0.46
RNF220-211ENST00000474956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
RNF220-211ENST00000474956 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
RNF220-211ENST00000474956 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
RNF220-211ENST00000474956 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
RNF220-211ENST00000474956 NAIPQ13075 1403 aa17.94■□□□□ 0.46
RNF220-211ENST00000474956 NUP153P49790 1475 aaKnown RBP17.92■□□□□ 0.46
RNF220-211ENST00000474956 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
RNF220-211ENST00000474956 KDM6BO15054 1643 aa17.91■□□□□ 0.46
RNF220-211ENST00000474956 PLB1Q6P1J6 1458 aa17.91■□□□□ 0.46
RNF220-211ENST00000474956 SYNJ2O15056 1496 aa17.87■□□□□ 0.45
RNF220-211ENST00000474956 FOXD1Q16676 465 aa17.87■□□□□ 0.45
RNF220-211ENST00000474956 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
RNF220-211ENST00000474956 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
RNF220-211ENST00000474956 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
RNF220-211ENST00000474956 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
RNF220-211ENST00000474956 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
RNF220-211ENST00000474956 TRIM52Q96A61 297 aa17.83■□□□□ 0.45
RNF220-211ENST00000474956 UACAQ9BZF9 1416 aa17.83■□□□□ 0.44
RNF220-211ENST00000474956 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
RNF220-211ENST00000474956 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
RNF220-211ENST00000474956 DENND4BO75064 1496 aaPredicted RBP17.82■□□□□ 0.44
RNF220-211ENST00000474956 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
RNF220-211ENST00000474956 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
RNF220-211ENST00000474956 KIF14Q15058 1648 aa17.77■□□□□ 0.44
RNF220-211ENST00000474956 TONSLQ96HA7 1378 aa17.77■□□□□ 0.44
RNF220-211ENST00000474956 NUP160Q12769 1436 aa17.77■□□□□ 0.44
RNF220-211ENST00000474956 ABCC5O15440 1437 aa17.74■□□□□ 0.43
RNF220-211ENST00000474956 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms