RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RIMBP3CA6NJZ7 1639 aa6.85□□□□□ -1.31
GAPVD1-216ENST00000474637 RIMBP3BA6NNM3 1639 aa6.85□□□□□ -1.31
GAPVD1-216ENST00000474637 RIMBP3Q9UFD9 1639 aa6.85□□□□□ -1.31
GAPVD1-216ENST00000474637 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
GAPVD1-216ENST00000474637 KIAA0586Q9BVV6 1533 aa6.84□□□□□ -1.31
GAPVD1-216ENST00000474637 SHROOM2Q13796 1616 aa6.84□□□□□ -1.31
GAPVD1-216ENST00000474637 PRXQ9BXM0 1461 aa6.84□□□□□ -1.32
GAPVD1-216ENST00000474637 FOXD1Q16676 465 aa6.83□□□□□ -1.32
GAPVD1-216ENST00000474637 CSRNP3Q8WYN3 585 aa6.83□□□□□ -1.32
GAPVD1-216ENST00000474637 CTTNBP2Q8WZ74 1663 aa6.8□□□□□ -1.32
GAPVD1-216ENST00000474637 IQGAP2Q13576 1575 aa6.8□□□□□ -1.32
GAPVD1-216ENST00000474637 JPH4Q96JJ6 628 aa6.8□□□□□ -1.32
GAPVD1-216ENST00000474637 KIF21BO75037 1637 aa6.8□□□□□ -1.32
GAPVD1-216ENST00000474637 PRG4Q92954 1404 aaPredicted RBP6.79□□□□□ -1.32
GAPVD1-216ENST00000474637 ARAP1Q96P48 1450 aa6.79□□□□□ -1.32
GAPVD1-216ENST00000474637 CARMIL2Q6F5E8 1435 aa6.78□□□□□ -1.32
GAPVD1-216ENST00000474637 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
GAPVD1-216ENST00000474637 FAM9AQ8IZU1 332 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-216ENST00000474637 ERCC6L2Q5T890 1561 aa6.77□□□□□ -1.33
GAPVD1-216ENST00000474637 GOLGA3Q08378 1498 aa6.76□□□□□ -1.33
GAPVD1-216ENST00000474637 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
GAPVD1-216ENST00000474637 TNIKQ9UKE5 1360 aa6.74□□□□□ -1.33
GAPVD1-216ENST00000474637 KIAA0556O60303 1618 aa6.74□□□□□ -1.33
GAPVD1-216ENST00000474637 DISP1Q96F81 1524 aa6.73□□□□□ -1.33
GAPVD1-216ENST00000474637 PTPRGP23470 1445 aa6.72□□□□□ -1.33
GAPVD1-216ENST00000474637 SAMD9Q5K651 1589 aa6.71□□□□□ -1.33
GAPVD1-216ENST00000474637 UBTFP17480 764 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-216ENST00000474637 PPP6R1Q9UPN7 881 aa6.71□□□□□ -1.34
GAPVD1-216ENST00000474637 EFCAB5A4FU69 1503 aa6.7□□□□□ -1.34
GAPVD1-216ENST00000474637 UHRF1BP1LA0JNW5 1464 aa6.7□□□□□ -1.34
GAPVD1-216ENST00000474637 UACAQ9BZF9 1416 aa6.69□□□□□ -1.34
GAPVD1-216ENST00000474637 NPM1P06748 294 aaKnown RBP eCLIP6.69□□□□□ -1.34
GAPVD1-216ENST00000474637 ADRA2BP18089 450 aa6.69□□□□□ -1.34
GAPVD1-216ENST00000474637 ADCY10Q96PN6 1610 aa6.68□□□□□ -1.34
GAPVD1-216ENST00000474637 LOC105371045A0A1W2PR82 267 aa6.68□□□□□ -1.34
GAPVD1-216ENST00000474637 ABCC2Q92887 1545 aa6.67□□□□□ -1.34
GAPVD1-216ENST00000474637 ABCA8O94911 1581 aa6.66□□□□□ -1.34
GAPVD1-216ENST00000474637 TTBK1Q5TCY1 1321 aaPredicted RBP6.66□□□□□ -1.34
GAPVD1-216ENST00000474637 EHMT2Q96KQ7 1210 aa6.66□□□□□ -1.34
GAPVD1-216ENST00000474637 MAPKBP1O60336 1514 aa6.65□□□□□ -1.34
GAPVD1-216ENST00000474637 P3H3Q8IVL6 736 aa6.65□□□□□ -1.35
GAPVD1-216ENST00000474637 KDM5BQ9UGL1 1544 aa6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 FHOD3Q2V2M9 1422 aa6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 RAPGEF6Q8TEU7 1601 aa6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 PCGF6Q9BYE7 350 aa6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 FMN1Q68DA7 1419 aa6.64□□□□□ -1.35
GAPVD1-216ENST00000474637 PLB1Q6P1J6 1458 aa6.63□□□□□ -1.35
GAPVD1-216ENST00000474637 ARHGAP35Q9NRY4 1499 aa6.63□□□□□ -1.35
GAPVD1-216ENST00000474637 ZCCHC11Q5TAX3 1644 aaKnown RBP6.63□□□□□ -1.35
GAPVD1-216ENST00000474637 TRHP20396 242 aaPredicted RBP6.62□□□□□ -1.35
GAPVD1-216ENST00000474637 CLIP1P30622 1438 aa6.62□□□□□ -1.35
GAPVD1-216ENST00000474637 ABCC10Q5T3U5 1492 aa6.61□□□□□ -1.35
GAPVD1-216ENST00000474637 ASXL2Q76L83 1435 aa6.61□□□□□ -1.35
GAPVD1-216ENST00000474637 HECW1Q76N89 1606 aa6.6□□□□□ -1.35
GAPVD1-216ENST00000474637 GLI2P10070 1586 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 DIP2BQ9P265 1576 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 KIF13AQ9H1H9 1805 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 CEP162Q5TB80 1403 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 ATP10BO94823 1461 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 NUP153P49790 1475 aaKnown RBP6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 WDR7Q9Y4E6 1490 aa6.59□□□□□ -1.35
GAPVD1-216ENST00000474637 HRCP23327 699 aa6.58□□□□□ -1.36
GAPVD1-216ENST00000474637 CASKIN1Q8WXD9 1431 aa6.58□□□□□ -1.36
GAPVD1-216ENST00000474637 FAM69CQ0P6D2 419 aa6.57□□□□□ -1.36
GAPVD1-216ENST00000474637 EPRSP07814 1512 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-216ENST00000474637 CCDC18Q5T9S5 1454 aa6.57□□□□□ -1.36
GAPVD1-216ENST00000474637 FYCO1Q9BQS8 1478 aa6.57□□□□□ -1.36
GAPVD1-216ENST00000474637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-216ENST00000474637 HNRNPUL2Q1KMD3 747 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-216ENST00000474637 CDK11AQ9UQ88 783 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-216ENST00000474637 PCF11O94913 1555 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-216ENST00000474637 PLEKHD1A6NEE1 506 aa6.55□□□□□ -1.36
GAPVD1-216ENST00000474637 CFAP43Q8NDM7 1665 aa6.55□□□□□ -1.36
GAPVD1-216ENST00000474637 ATP1B4Q9UN42 357 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-216ENST00000474637 MAP3K4Q9Y6R4 1608 aa6.55□□□□□ -1.36
GAPVD1-216ENST00000474637 CDK13Q14004 1512 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-216ENST00000474637 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
GAPVD1-216ENST00000474637 TEX14Q8IWB6 1497 aa6.53□□□□□ -1.36
GAPVD1-216ENST00000474637 ABCA9Q8IUA7 1624 aa6.53□□□□□ -1.36
GAPVD1-216ENST00000474637 KCNH8Q96L42 1107 aa6.53□□□□□ -1.36
GAPVD1-216ENST00000474637 LRRIQ1Q96JM4 1722 aa6.53□□□□□ -1.36
GAPVD1-216ENST00000474637 VPS8Q8N3P4 1428 aa6.52□□□□□ -1.37
GAPVD1-216ENST00000474637 MAGI3Q5TCQ9 1506 aa6.52□□□□□ -1.37
GAPVD1-216ENST00000474637 TSPOAP1O95153 1857 aa6.52□□□□□ -1.37
GAPVD1-216ENST00000474637 CD109Q6YHK3 1445 aa6.52□□□□□ -1.37
GAPVD1-216ENST00000474637 PPRC1Q5VV67 1664 aaKnown RBP6.51□□□□□ -1.37
GAPVD1-216ENST00000474637 TROQ12816 1431 aaPredicted RBP6.51□□□□□ -1.37
GAPVD1-216ENST00000474637 KIF14Q15058 1648 aa6.51□□□□□ -1.37
GAPVD1-216ENST00000474637 PHLDB1Q86UU1 1377 aa6.5□□□□□ -1.37
GAPVD1-216ENST00000474637 CFAP74Q9C0B2 1584 aa6.5□□□□□ -1.37
GAPVD1-216ENST00000474637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
GAPVD1-216ENST00000474637 TRIM26Q12899 539 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-216ENST00000474637 MAP3K1Q13233 1512 aa6.49□□□□□ -1.37
GAPVD1-216ENST00000474637 PPARGC1BQ86YN6 1023 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-216ENST00000474637 NEO1Q92859 1461 aa6.49□□□□□ -1.37
GAPVD1-216ENST00000474637 ARAP3Q8WWN8 1544 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 KDM6BO15054 1643 aa6.48□□□□□ -1.37
GAPVD1-216ENST00000474637 EHBP1L1Q8N3D4 1523 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms