RNA–Protein interactions for RNA: ENST00000474571.1

ITGAV-206, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 333 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-206ENST00000474571 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
ITGAV-206ENST00000474571 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
ITGAV-206ENST00000474571 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
ITGAV-206ENST00000474571 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
ITGAV-206ENST00000474571 FBLN2P98095 1184 aa12.78□□□□□ -0.36
ITGAV-206ENST00000474571 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
ITGAV-206ENST00000474571 POLA2Q14181 598 aa12.75□□□□□ -0.37
ITGAV-206ENST00000474571 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
ITGAV-206ENST00000474571 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
ITGAV-206ENST00000474571 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
ITGAV-206ENST00000474571 KIF13AQ9H1H9 1805 aa12.71□□□□□ -0.38
ITGAV-206ENST00000474571 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.38
ITGAV-206ENST00000474571 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
ITGAV-206ENST00000474571 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
ITGAV-206ENST00000474571 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
ITGAV-206ENST00000474571 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
ITGAV-206ENST00000474571 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
ITGAV-206ENST00000474571 MAGI1Q96QZ7 1491 aaPredicted RBP12.63□□□□□ -0.39
ITGAV-206ENST00000474571 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
ITGAV-206ENST00000474571 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
ITGAV-206ENST00000474571 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
ITGAV-206ENST00000474571 SOGA1O94964 1423 aa12.6□□□□□ -0.39
ITGAV-206ENST00000474571 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
ITGAV-206ENST00000474571 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
ITGAV-206ENST00000474571 GRIN2BQ13224 1484 aa12.57□□□□□ -0.4
ITGAV-206ENST00000474571 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
ITGAV-206ENST00000474571 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
ITGAV-206ENST00000474571 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
ITGAV-206ENST00000474571 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
ITGAV-206ENST00000474571 CUX1P39880 1505 aa12.5□□□□□ -0.41
ITGAV-206ENST00000474571 SHROOM2Q13796 1616 aa12.5□□□□□ -0.41
ITGAV-206ENST00000474571 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
ITGAV-206ENST00000474571 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
ITGAV-206ENST00000474571 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
ITGAV-206ENST00000474571 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
ITGAV-206ENST00000474571 TSPOAP1O95153 1857 aa12.45□□□□□ -0.42
ITGAV-206ENST00000474571 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
ITGAV-206ENST00000474571 KDM6BO15054 1643 aa12.44□□□□□ -0.42
ITGAV-206ENST00000474571 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
ITGAV-206ENST00000474571 DIP2BQ9P265 1576 aa12.43□□□□□ -0.42
ITGAV-206ENST00000474571 ADAMTS12P58397 1594 aa12.42□□□□□ -0.42
ITGAV-206ENST00000474571 NUP160Q12769 1436 aa12.4□□□□□ -0.42
ITGAV-206ENST00000474571 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
ITGAV-206ENST00000474571 ABCA10Q8WWZ4 1543 aa12.38□□□□□ -0.43
ITGAV-206ENST00000474571 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
ITGAV-206ENST00000474571 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
ITGAV-206ENST00000474571 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.43
ITGAV-206ENST00000474571 HECW2Q9P2P5 1572 aa12.32□□□□□ -0.44
ITGAV-206ENST00000474571 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
ITGAV-206ENST00000474571 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
ITGAV-206ENST00000474571 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
ITGAV-206ENST00000474571 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
ITGAV-206ENST00000474571 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
ITGAV-206ENST00000474571 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.44
ITGAV-206ENST00000474571 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
ITGAV-206ENST00000474571 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
ITGAV-206ENST00000474571 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
ITGAV-206ENST00000474571 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
ITGAV-206ENST00000474571 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
ITGAV-206ENST00000474571 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
ITGAV-206ENST00000474571 ZBTB22O15209 634 aa12.2□□□□□ -0.46
ITGAV-206ENST00000474571 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
ITGAV-206ENST00000474571 HAX1O00165 279 aa12.17□□□□□ -0.46
ITGAV-206ENST00000474571 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
ITGAV-206ENST00000474571 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
ITGAV-206ENST00000474571 CUL7Q14999 1698 aa12.16□□□□□ -0.46
ITGAV-206ENST00000474571 GLI2P10070 1586 aa12.14□□□□□ -0.47
ITGAV-206ENST00000474571 COL17A1Q9UMD9 1497 aaPredicted RBP12.13□□□□□ -0.47
ITGAV-206ENST00000474571 ATXN8OSP0DMR3 200 aa12.12□□□□□ -0.47
ITGAV-206ENST00000474571 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
ITGAV-206ENST00000474571 MAP3K4Q9Y6R4 1608 aa12.11□□□□□ -0.47
ITGAV-206ENST00000474571 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
ITGAV-206ENST00000474571 ASXL2Q76L83 1435 aa12.06□□□□□ -0.48
ITGAV-206ENST00000474571 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
ITGAV-206ENST00000474571 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
ITGAV-206ENST00000474571 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
ITGAV-206ENST00000474571 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
ITGAV-206ENST00000474571 KIAA0586Q9BVV6 1533 aa12.05□□□□□ -0.48
ITGAV-206ENST00000474571 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
ITGAV-206ENST00000474571 KIF21BO75037 1637 aa12.03□□□□□ -0.48
ITGAV-206ENST00000474571 EPRSP07814 1512 aaKnown RBP12.01□□□□□ -0.49
ITGAV-206ENST00000474571 ZCCHC11Q5TAX3 1644 aaKnown RBP12□□□□□ -0.49
ITGAV-206ENST00000474571 PTPRGP23470 1445 aa12□□□□□ -0.49
ITGAV-206ENST00000474571 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
ITGAV-206ENST00000474571 TEX14Q8IWB6 1497 aa11.99□□□□□ -0.49
ITGAV-206ENST00000474571 LMTK3Q96Q04 1460 aa11.99□□□□□ -0.49
ITGAV-206ENST00000474571 UHRF1BP1LA0JNW5 1464 aa11.97□□□□□ -0.49
ITGAV-206ENST00000474571 TTBK1Q5TCY1 1321 aaPredicted RBP11.97□□□□□ -0.49
ITGAV-206ENST00000474571 TNIKQ9UKE5 1360 aa11.95□□□□□ -0.5
ITGAV-206ENST00000474571 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
ITGAV-206ENST00000474571 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
ITGAV-206ENST00000474571 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
ITGAV-206ENST00000474571 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
ITGAV-206ENST00000474571 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
ITGAV-206ENST00000474571 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
ITGAV-206ENST00000474571 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
ITGAV-206ENST00000474571 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
ITGAV-206ENST00000474571 CARMIL2Q6F5E8 1435 aa11.91□□□□□ -0.5
ITGAV-206ENST00000474571 EVX2Q03828 476 aa11.9□□□□□ -0.5
ITGAV-206ENST00000474571 DISP1Q96F81 1524 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms