RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 CHD1O14646 1710 aa17.24■□□□□ 0.35
CASC3-204ENST00000474190 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
CASC3-204ENST00000474190 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
CASC3-204ENST00000474190 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
CASC3-204ENST00000474190 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
CASC3-204ENST00000474190 KIF21BO75037 1637 aa17.18■□□□□ 0.34
CASC3-204ENST00000474190 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
CASC3-204ENST00000474190 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
CASC3-204ENST00000474190 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
CASC3-204ENST00000474190 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
CASC3-204ENST00000474190 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
CASC3-204ENST00000474190 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
CASC3-204ENST00000474190 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
CASC3-204ENST00000474190 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
CASC3-204ENST00000474190 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
CASC3-204ENST00000474190 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
CASC3-204ENST00000474190 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
CASC3-204ENST00000474190 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
CASC3-204ENST00000474190 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
CASC3-204ENST00000474190 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
CASC3-204ENST00000474190 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
CASC3-204ENST00000474190 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
CASC3-204ENST00000474190 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
CASC3-204ENST00000474190 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
CASC3-204ENST00000474190 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
CASC3-204ENST00000474190 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
CASC3-204ENST00000474190 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
CASC3-204ENST00000474190 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
CASC3-204ENST00000474190 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
CASC3-204ENST00000474190 CLIP1P30622 1438 aa16.83■□□□□ 0.28
CASC3-204ENST00000474190 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
CASC3-204ENST00000474190 PTPRGP23470 1445 aa16.82■□□□□ 0.28
CASC3-204ENST00000474190 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
CASC3-204ENST00000474190 ABCA8O94911 1581 aa16.74■□□□□ 0.27
CASC3-204ENST00000474190 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
CASC3-204ENST00000474190 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
CASC3-204ENST00000474190 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
CASC3-204ENST00000474190 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
CASC3-204ENST00000474190 ABCC2Q92887 1545 aa16.68■□□□□ 0.26
CASC3-204ENST00000474190 NUP153P49790 1475 aaKnown RBP16.67■□□□□ 0.26
CASC3-204ENST00000474190 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
CASC3-204ENST00000474190 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
CASC3-204ENST00000474190 CASKIN1Q8WXD9 1431 aa16.64■□□□□ 0.25
CASC3-204ENST00000474190 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
CASC3-204ENST00000474190 ATP10BO94823 1461 aa16.63■□□□□ 0.25
CASC3-204ENST00000474190 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
CASC3-204ENST00000474190 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
CASC3-204ENST00000474190 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
CASC3-204ENST00000474190 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
CASC3-204ENST00000474190 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
CASC3-204ENST00000474190 EPRSP07814 1512 aaKnown RBP16.56■□□□□ 0.24
CASC3-204ENST00000474190 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
CASC3-204ENST00000474190 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
CASC3-204ENST00000474190 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
CASC3-204ENST00000474190 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
CASC3-204ENST00000474190 LRRIQ1Q96JM4 1722 aa16.51■□□□□ 0.23
CASC3-204ENST00000474190 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
CASC3-204ENST00000474190 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
CASC3-204ENST00000474190 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
CASC3-204ENST00000474190 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
CASC3-204ENST00000474190 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
CASC3-204ENST00000474190 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
CASC3-204ENST00000474190 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
CASC3-204ENST00000474190 CCDC18Q5T9S5 1454 aa16.45■□□□□ 0.22
CASC3-204ENST00000474190 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
CASC3-204ENST00000474190 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
CASC3-204ENST00000474190 DIP2BQ9P265 1576 aa16.42■□□□□ 0.22
CASC3-204ENST00000474190 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
CASC3-204ENST00000474190 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
CASC3-204ENST00000474190 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
CASC3-204ENST00000474190 KDM6BO15054 1643 aa16.4■□□□□ 0.22
CASC3-204ENST00000474190 PLEKHD1A6NEE1 506 aa16.39■□□□□ 0.21
CASC3-204ENST00000474190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
CASC3-204ENST00000474190 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
CASC3-204ENST00000474190 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
CASC3-204ENST00000474190 GLI2P10070 1586 aa16.36■□□□□ 0.21
CASC3-204ENST00000474190 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
CASC3-204ENST00000474190 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
CASC3-204ENST00000474190 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
CASC3-204ENST00000474190 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
CASC3-204ENST00000474190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.34■□□□□ 0.21
CASC3-204ENST00000474190 KIF14Q15058 1648 aa16.34■□□□□ 0.21
CASC3-204ENST00000474190 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
CASC3-204ENST00000474190 EHBP1L1Q8N3D4 1523 aa16.3■□□□□ 0.2
CASC3-204ENST00000474190 TSPOAP1O95153 1857 aa16.3■□□□□ 0.2
CASC3-204ENST00000474190 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
CASC3-204ENST00000474190 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
CASC3-204ENST00000474190 NCOA2Q15596 1464 aa16.28■□□□□ 0.2
CASC3-204ENST00000474190 GPATCH8Q9UKJ3 1502 aaKnown RBP16.27■□□□□ 0.2
CASC3-204ENST00000474190 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
CASC3-204ENST00000474190 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
CASC3-204ENST00000474190 PLCH2O75038 1416 aa16.26■□□□□ 0.19
CASC3-204ENST00000474190 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CASC3-204ENST00000474190 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
CASC3-204ENST00000474190 PPRC1Q5VV67 1664 aaKnown RBP16.24■□□□□ 0.19
CASC3-204ENST00000474190 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
CASC3-204ENST00000474190 APLP2Q06481 763 aa16.21■□□□□ 0.19
CASC3-204ENST00000474190 COL17A1Q9UMD9 1497 aaPredicted RBP16.2■□□□□ 0.18
CASC3-204ENST00000474190 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
CASC3-204ENST00000474190 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms