RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 PRG4Q92954 1404 aaPredicted RBP26.54■■□□□ 1.84
MRPL55-226ENST00000473066 KIAA0586Q9BVV6 1533 aa26.52■■□□□ 1.84
MRPL55-226ENST00000473066 JPH4Q96JJ6 628 aa26.5■■□□□ 1.83
MRPL55-226ENST00000473066 RAPGEF2Q9Y4G8 1499 aa26.43■■□□□ 1.82
MRPL55-226ENST00000473066 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
MRPL55-226ENST00000473066 IQGAP2Q13576 1575 aa26.41■■□□□ 1.82
MRPL55-226ENST00000473066 CTTNBP2Q8WZ74 1663 aa26.35■■□□□ 1.81
MRPL55-226ENST00000473066 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
MRPL55-226ENST00000473066 PRXQ9BXM0 1461 aa26.23■■□□□ 1.79
MRPL55-226ENST00000473066 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
MRPL55-226ENST00000473066 UGGT2Q9NYU1 1516 aa26.2■■□□□ 1.79
MRPL55-226ENST00000473066 EEA1Q15075 1411 aa26.2■■□□□ 1.78
MRPL55-226ENST00000473066 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
MRPL55-226ENST00000473066 PTPRGP23470 1445 aa26.18■■□□□ 1.78
MRPL55-226ENST00000473066 NPM1P06748 294 aaKnown RBP eCLIP26.17■■□□□ 1.78
MRPL55-226ENST00000473066 KIAA0556O60303 1618 aa26.17■■□□□ 1.78
MRPL55-226ENST00000473066 DISP1Q96F81 1524 aa26.15■■□□□ 1.78
MRPL55-226ENST00000473066 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.78
MRPL55-226ENST00000473066 KIF13AQ9H1H9 1805 aa26.12■■□□□ 1.77
MRPL55-226ENST00000473066 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
MRPL55-226ENST00000473066 MAPKBP1O60336 1514 aa26.1■■□□□ 1.77
MRPL55-226ENST00000473066 GOLGA3Q08378 1498 aa26.09■■□□□ 1.77
MRPL55-226ENST00000473066 ABCC2Q92887 1545 aa26.01■■□□□ 1.75
MRPL55-226ENST00000473066 UACAQ9BZF9 1416 aa26.01■■□□□ 1.75
MRPL55-226ENST00000473066 UHRF1BP1LA0JNW5 1464 aa26■■□□□ 1.75
MRPL55-226ENST00000473066 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
MRPL55-226ENST00000473066 DIP2BQ9P265 1576 aa25.99■■□□□ 1.75
MRPL55-226ENST00000473066 FAM9AQ8IZU1 332 aaPredicted RBP25.99■■□□□ 1.75
MRPL55-226ENST00000473066 KIF21BO75037 1637 aa25.98■■□□□ 1.75
MRPL55-226ENST00000473066 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
MRPL55-226ENST00000473066 ZCCHC11Q5TAX3 1644 aaKnown RBP25.91■■□□□ 1.74
MRPL55-226ENST00000473066 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
MRPL55-226ENST00000473066 SAMD9Q5K651 1589 aa25.88■■□□□ 1.73
MRPL55-226ENST00000473066 KDM5BQ9UGL1 1544 aa25.88■■□□□ 1.73
MRPL55-226ENST00000473066 TSPOAP1O95153 1857 aa25.87■■□□□ 1.73
MRPL55-226ENST00000473066 PLB1Q6P1J6 1458 aa25.87■■□□□ 1.73
MRPL55-226ENST00000473066 ASXL2Q76L83 1435 aa25.86■■□□□ 1.73
MRPL55-226ENST00000473066 ABCA8O94911 1581 aa25.85■■□□□ 1.73
MRPL55-226ENST00000473066 P3H3Q8IVL6 736 aa25.78■■□□□ 1.72
MRPL55-226ENST00000473066 GLI2P10070 1586 aa25.77■■□□□ 1.72
MRPL55-226ENST00000473066 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
MRPL55-226ENST00000473066 RANGAP1P46060 587 aaPredicted RBP25.74■■□□□ 1.71
MRPL55-226ENST00000473066 RAPGEF6Q8TEU7 1601 aa25.73■■□□□ 1.71
MRPL55-226ENST00000473066 WDR7Q9Y4E6 1490 aa25.72■■□□□ 1.71
MRPL55-226ENST00000473066 EPRSP07814 1512 aaKnown RBP25.7■■□□□ 1.7
MRPL55-226ENST00000473066 UBTFP17480 764 aaKnown RBP25.7■■□□□ 1.7
MRPL55-226ENST00000473066 KDM6BO15054 1643 aa25.7■■□□□ 1.7
MRPL55-226ENST00000473066 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
MRPL55-226ENST00000473066 FHOD3Q2V2M9 1422 aa25.68■■□□□ 1.7
MRPL55-226ENST00000473066 MAP3K4Q9Y6R4 1608 aa25.67■■□□□ 1.7
MRPL55-226ENST00000473066 PPRC1Q5VV67 1664 aaKnown RBP25.66■■□□□ 1.7
MRPL55-226ENST00000473066 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
MRPL55-226ENST00000473066 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
MRPL55-226ENST00000473066 ARID3CA6NKF2 412 aa25.58■■□□□ 1.69
MRPL55-226ENST00000473066 ATP10BO94823 1461 aa25.57■■□□□ 1.68
MRPL55-226ENST00000473066 NUP153P49790 1475 aaKnown RBP25.53■■□□□ 1.68
MRPL55-226ENST00000473066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
MRPL55-226ENST00000473066 HNRNPUL2Q1KMD3 747 aaKnown RBP25.52■■□□□ 1.68
MRPL55-226ENST00000473066 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
MRPL55-226ENST00000473066 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
MRPL55-226ENST00000473066 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
MRPL55-226ENST00000473066 CD109Q6YHK3 1445 aa25.47■■□□□ 1.67
MRPL55-226ENST00000473066 HECW1Q76N89 1606 aa25.47■■□□□ 1.67
MRPL55-226ENST00000473066 MAGI3Q5TCQ9 1506 aa25.45■■□□□ 1.66
MRPL55-226ENST00000473066 ABCA9Q8IUA7 1624 aa25.45■■□□□ 1.66
MRPL55-226ENST00000473066 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
MRPL55-226ENST00000473066 PLEKHD1A6NEE1 506 aa25.35■■□□□ 1.65
MRPL55-226ENST00000473066 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
MRPL55-226ENST00000473066 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
MRPL55-226ENST00000473066 COL17A1Q9UMD9 1497 aaPredicted RBP25.31■■□□□ 1.64
MRPL55-226ENST00000473066 PCF11O94913 1555 aaKnown RBP25.29■■□□□ 1.64
MRPL55-226ENST00000473066 CLIP1P30622 1438 aa25.28■■□□□ 1.64
MRPL55-226ENST00000473066 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
MRPL55-226ENST00000473066 LRRIQ1Q96JM4 1722 aa25.26■■□□□ 1.63
MRPL55-226ENST00000473066 TTC37Q6PGP7 1564 aa25.25■■□□□ 1.63
MRPL55-226ENST00000473066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.63
MRPL55-226ENST00000473066 NEO1Q92859 1461 aa25.24■■□□□ 1.63
MRPL55-226ENST00000473066 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
MRPL55-226ENST00000473066 CDK11AQ9UQ88 783 aaPredicted RBP25.24■■□□□ 1.63
MRPL55-226ENST00000473066 ARAP3Q8WWN8 1544 aa25.22■■□□□ 1.63
MRPL55-226ENST00000473066 CCDC18Q5T9S5 1454 aa25.21■■□□□ 1.63
MRPL55-226ENST00000473066 KIF14Q15058 1648 aa25.21■■□□□ 1.63
MRPL55-226ENST00000473066 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.63
MRPL55-226ENST00000473066 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.62
MRPL55-226ENST00000473066 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
MRPL55-226ENST00000473066 FANCAO15360 1455 aa25.15■■□□□ 1.62
MRPL55-226ENST00000473066 TROQ12816 1431 aaPredicted RBP25.14■■□□□ 1.62
MRPL55-226ENST00000473066 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
MRPL55-226ENST00000473066 AKNAQ7Z591 1439 aa25.08■■□□□ 1.61
MRPL55-226ENST00000473066 FRMPD1Q5SYB0 1578 aa25.08■■□□□ 1.61
MRPL55-226ENST00000473066 RICTORQ6R327 1708 aa25.08■■□□□ 1.61
MRPL55-226ENST00000473066 ADGRL1O94910 1474 aa25.08■■□□□ 1.6
MRPL55-226ENST00000473066 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
MRPL55-226ENST00000473066 PLCH2O75038 1416 aa25.05■■□□□ 1.6
MRPL55-226ENST00000473066 KDM4FA0A1W2PPD8 638 aa25.02■■□□□ 1.6
MRPL55-226ENST00000473066 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
MRPL55-226ENST00000473066 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
MRPL55-226ENST00000473066 PREX2Q70Z35 1606 aa25■■□□□ 1.59
MRPL55-226ENST00000473066 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
MRPL55-226ENST00000473066 CDC42BPBQ9Y5S2 1711 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms