RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
KDM5B-207ENST00000472822 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
KDM5B-207ENST00000472822 FBLN2P98095 1184 aa14.7□□□□□ -0.06
KDM5B-207ENST00000472822 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
KDM5B-207ENST00000472822 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
KDM5B-207ENST00000472822 CHD1O14646 1710 aa14.68□□□□□ -0.06
KDM5B-207ENST00000472822 CLIP1P30622 1438 aa14.68□□□□□ -0.06
KDM5B-207ENST00000472822 NUP160Q12769 1436 aa14.67□□□□□ -0.06
KDM5B-207ENST00000472822 ARHGAP35Q9NRY4 1499 aa14.64□□□□□ -0.07
KDM5B-207ENST00000472822 FOXD1Q16676 465 aa14.64□□□□□ -0.07
KDM5B-207ENST00000472822 KIAA0586Q9BVV6 1533 aa14.64□□□□□ -0.07
KDM5B-207ENST00000472822 IQGAP2Q13576 1575 aa14.62□□□□□ -0.07
KDM5B-207ENST00000472822 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
KDM5B-207ENST00000472822 SAMD9Q5K651 1589 aa14.58□□□□□ -0.08
KDM5B-207ENST00000472822 UGGT2Q9NYU1 1516 aa14.57□□□□□ -0.08
KDM5B-207ENST00000472822 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
KDM5B-207ENST00000472822 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
KDM5B-207ENST00000472822 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
KDM5B-207ENST00000472822 DISP1Q96F81 1524 aa14.54□□□□□ -0.08
KDM5B-207ENST00000472822 FHOD3Q2V2M9 1422 aa14.53□□□□□ -0.08
KDM5B-207ENST00000472822 CLASP1Q7Z460 1538 aa14.53□□□□□ -0.08
KDM5B-207ENST00000472822 VPS8Q8N3P4 1428 aa14.52□□□□□ -0.09
KDM5B-207ENST00000472822 SHROOM2Q13796 1616 aa14.5□□□□□ -0.09
KDM5B-207ENST00000472822 KIAA0556O60303 1618 aa14.49□□□□□ -0.09
KDM5B-207ENST00000472822 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
KDM5B-207ENST00000472822 ERCC6L2Q5T890 1561 aa14.46□□□□□ -0.1
KDM5B-207ENST00000472822 PRG4Q92954 1404 aaPredicted RBP14.45□□□□□ -0.1
KDM5B-207ENST00000472822 PCF11O94913 1555 aaKnown RBP14.41□□□□□ -0.1
KDM5B-207ENST00000472822 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
KDM5B-207ENST00000472822 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
KDM5B-207ENST00000472822 CASKIN1Q8WXD9 1431 aa14.4□□□□□ -0.1
KDM5B-207ENST00000472822 PPARGC1BQ86YN6 1023 aaKnown RBP14.4□□□□□ -0.1
KDM5B-207ENST00000472822 TTBK1Q5TCY1 1321 aaPredicted RBP14.38□□□□□ -0.11
KDM5B-207ENST00000472822 LRRIQ1Q96JM4 1722 aa14.36□□□□□ -0.11
KDM5B-207ENST00000472822 FYCO1Q9BQS8 1478 aa14.36□□□□□ -0.11
KDM5B-207ENST00000472822 PLB1Q6P1J6 1458 aa14.34□□□□□ -0.11
KDM5B-207ENST00000472822 KANK4Q5T7N3 995 aaPredicted RBP14.33□□□□□ -0.11
KDM5B-207ENST00000472822 PTPRGP23470 1445 aa14.33□□□□□ -0.12
KDM5B-207ENST00000472822 ABCA8O94911 1581 aa14.32□□□□□ -0.12
KDM5B-207ENST00000472822 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
KDM5B-207ENST00000472822 TIAM1Q13009 1591 aa14.31□□□□□ -0.12
KDM5B-207ENST00000472822 MAP3K1Q13233 1512 aa14.31□□□□□ -0.12
KDM5B-207ENST00000472822 RAPGEF6Q8TEU7 1601 aa14.31□□□□□ -0.12
KDM5B-207ENST00000472822 NUP153P49790 1475 aaKnown RBP14.3□□□□□ -0.12
KDM5B-207ENST00000472822 CFAP43Q8NDM7 1665 aa14.29□□□□□ -0.12
KDM5B-207ENST00000472822 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
KDM5B-207ENST00000472822 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
KDM5B-207ENST00000472822 APLP2Q06481 763 aa14.27□□□□□ -0.12
KDM5B-207ENST00000472822 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.13
KDM5B-207ENST00000472822 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
KDM5B-207ENST00000472822 UACAQ9BZF9 1416 aa14.25□□□□□ -0.13
KDM5B-207ENST00000472822 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
KDM5B-207ENST00000472822 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
KDM5B-207ENST00000472822 MAGI3Q5TCQ9 1506 aa14.25□□□□□ -0.13
KDM5B-207ENST00000472822 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
KDM5B-207ENST00000472822 ATP10BO94823 1461 aa14.23□□□□□ -0.13
KDM5B-207ENST00000472822 CCDC18Q5T9S5 1454 aa14.22□□□□□ -0.13
KDM5B-207ENST00000472822 ABCC2Q92887 1545 aa14.21□□□□□ -0.13
KDM5B-207ENST00000472822 UHRF1BP1LA0JNW5 1464 aa14.2□□□□□ -0.14
KDM5B-207ENST00000472822 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
KDM5B-207ENST00000472822 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
KDM5B-207ENST00000472822 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
KDM5B-207ENST00000472822 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
KDM5B-207ENST00000472822 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
KDM5B-207ENST00000472822 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
KDM5B-207ENST00000472822 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
KDM5B-207ENST00000472822 EHBP1L1Q8N3D4 1523 aa14.14□□□□□ -0.15
KDM5B-207ENST00000472822 PHLDB1Q86UU1 1377 aa14.14□□□□□ -0.15
KDM5B-207ENST00000472822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
KDM5B-207ENST00000472822 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
KDM5B-207ENST00000472822 ZCCHC11Q5TAX3 1644 aaKnown RBP14.13□□□□□ -0.15
KDM5B-207ENST00000472822 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
KDM5B-207ENST00000472822 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
KDM5B-207ENST00000472822 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
KDM5B-207ENST00000472822 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
KDM5B-207ENST00000472822 SUPT6HQ7KZ85 1726 aaKnown RBP14.09□□□□□ -0.15
KDM5B-207ENST00000472822 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
KDM5B-207ENST00000472822 KIF14Q15058 1648 aa14.09□□□□□ -0.15
KDM5B-207ENST00000472822 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.15
KDM5B-207ENST00000472822 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
KDM5B-207ENST00000472822 MSH5O43196 834 aa14.06□□□□□ -0.16
KDM5B-207ENST00000472822 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
KDM5B-207ENST00000472822 MYOM3Q5VTT5 1437 aa14.03□□□□□ -0.16
KDM5B-207ENST00000472822 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
KDM5B-207ENST00000472822 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
KDM5B-207ENST00000472822 ASXL2Q76L83 1435 aa14.01□□□□□ -0.17
KDM5B-207ENST00000472822 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
KDM5B-207ENST00000472822 KCNH8Q96L42 1107 aa14□□□□□ -0.17
KDM5B-207ENST00000472822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.99□□□□□ -0.17
KDM5B-207ENST00000472822 WDR7Q9Y4E6 1490 aa13.99□□□□□ -0.17
KDM5B-207ENST00000472822 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
KDM5B-207ENST00000472822 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
KDM5B-207ENST00000472822 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
KDM5B-207ENST00000472822 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
KDM5B-207ENST00000472822 TCOF1Q13428 1488 aaKnown RBP13.96□□□□□ -0.18
KDM5B-207ENST00000472822 MIA2Q96PC5 1412 aa13.96□□□□□ -0.18
KDM5B-207ENST00000472822 PTPN23Q9H3S7 1636 aa13.96□□□□□ -0.18
KDM5B-207ENST00000472822 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
KDM5B-207ENST00000472822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.95□□□□□ -0.18
KDM5B-207ENST00000472822 FAM50AQ14320 339 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms