RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
HIF3A-206ENST00000472815 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
HIF3A-206ENST00000472815 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
HIF3A-206ENST00000472815 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
HIF3A-206ENST00000472815 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
HIF3A-206ENST00000472815 FBLN2P98095 1184 aa22.82■■□□□ 1.24
HIF3A-206ENST00000472815 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
HIF3A-206ENST00000472815 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
HIF3A-206ENST00000472815 APLP2Q06481 763 aa22.77■■□□□ 1.24
HIF3A-206ENST00000472815 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
HIF3A-206ENST00000472815 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
HIF3A-206ENST00000472815 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
HIF3A-206ENST00000472815 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
HIF3A-206ENST00000472815 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
HIF3A-206ENST00000472815 NUP160Q12769 1436 aa22.67■■□□□ 1.22
HIF3A-206ENST00000472815 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
HIF3A-206ENST00000472815 UGGT2Q9NYU1 1516 aa22.65■■□□□ 1.22
HIF3A-206ENST00000472815 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
HIF3A-206ENST00000472815 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
HIF3A-206ENST00000472815 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
HIF3A-206ENST00000472815 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
HIF3A-206ENST00000472815 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
HIF3A-206ENST00000472815 FYCO1Q9BQS8 1478 aa22.57■■□□□ 1.2
HIF3A-206ENST00000472815 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
HIF3A-206ENST00000472815 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
HIF3A-206ENST00000472815 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
HIF3A-206ENST00000472815 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
HIF3A-206ENST00000472815 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
HIF3A-206ENST00000472815 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
HIF3A-206ENST00000472815 TIAM1Q13009 1591 aa22.49■■□□□ 1.19
HIF3A-206ENST00000472815 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
HIF3A-206ENST00000472815 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
HIF3A-206ENST00000472815 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.19
HIF3A-206ENST00000472815 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
HIF3A-206ENST00000472815 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
HIF3A-206ENST00000472815 HECW1Q76N89 1606 aa22.43■■□□□ 1.18
HIF3A-206ENST00000472815 CCDC18Q5T9S5 1454 aa22.39■■□□□ 1.17
HIF3A-206ENST00000472815 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
HIF3A-206ENST00000472815 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
HIF3A-206ENST00000472815 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
HIF3A-206ENST00000472815 ARHGEF11O15085 1522 aa22.33■■□□□ 1.16
HIF3A-206ENST00000472815 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
HIF3A-206ENST00000472815 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
HIF3A-206ENST00000472815 MTUS2Q5JR59 1369 aa22.27■■□□□ 1.16
HIF3A-206ENST00000472815 EPRSP07814 1512 aaKnown RBP22.27■■□□□ 1.15
HIF3A-206ENST00000472815 EHBP1L1Q8N3D4 1523 aa22.25■■□□□ 1.15
HIF3A-206ENST00000472815 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
HIF3A-206ENST00000472815 PTPRGP23470 1445 aa22.2■■□□□ 1.14
HIF3A-206ENST00000472815 RRBP1Q9P2E9 1410 aaKnown RBP22.2■■□□□ 1.14
HIF3A-206ENST00000472815 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
HIF3A-206ENST00000472815 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
HIF3A-206ENST00000472815 ABCA8O94911 1581 aa22.18■■□□□ 1.14
HIF3A-206ENST00000472815 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
HIF3A-206ENST00000472815 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
HIF3A-206ENST00000472815 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.14
HIF3A-206ENST00000472815 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
HIF3A-206ENST00000472815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
HIF3A-206ENST00000472815 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
HIF3A-206ENST00000472815 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
HIF3A-206ENST00000472815 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
HIF3A-206ENST00000472815 UACAQ9BZF9 1416 aa22.08■■□□□ 1.12
HIF3A-206ENST00000472815 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
HIF3A-206ENST00000472815 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
HIF3A-206ENST00000472815 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
HIF3A-206ENST00000472815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
HIF3A-206ENST00000472815 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
HIF3A-206ENST00000472815 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
HIF3A-206ENST00000472815 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.11
HIF3A-206ENST00000472815 ATP10BO94823 1461 aa22■■□□□ 1.11
HIF3A-206ENST00000472815 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
HIF3A-206ENST00000472815 UHRF1BP1LA0JNW5 1464 aa22■■□□□ 1.11
HIF3A-206ENST00000472815 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
HIF3A-206ENST00000472815 HRCP23327 699 aa21.97■■□□□ 1.11
HIF3A-206ENST00000472815 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
HIF3A-206ENST00000472815 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
HIF3A-206ENST00000472815 KIF14Q15058 1648 aa21.94■■□□□ 1.1
HIF3A-206ENST00000472815 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
HIF3A-206ENST00000472815 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
HIF3A-206ENST00000472815 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
HIF3A-206ENST00000472815 KDM5BQ9UGL1 1544 aa21.89■■□□□ 1.09
HIF3A-206ENST00000472815 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
HIF3A-206ENST00000472815 TCOF1Q13428 1488 aaKnown RBP21.88■■□□□ 1.09
HIF3A-206ENST00000472815 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
HIF3A-206ENST00000472815 ITGAEP38570 1179 aa21.86■■□□□ 1.09
HIF3A-206ENST00000472815 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
HIF3A-206ENST00000472815 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
HIF3A-206ENST00000472815 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
HIF3A-206ENST00000472815 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
HIF3A-206ENST00000472815 CDC42BPAQ5VT25 1732 aa21.78■■□□□ 1.08
HIF3A-206ENST00000472815 CFDP1Q9UEE9 299 aaPredicted RBP21.77■■□□□ 1.08
HIF3A-206ENST00000472815 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
HIF3A-206ENST00000472815 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
HIF3A-206ENST00000472815 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
HIF3A-206ENST00000472815 CAMSAP2Q08AD1 1489 aa21.72■■□□□ 1.07
HIF3A-206ENST00000472815 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms