RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
UBE2F-220ENST00000472479 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
UBE2F-220ENST00000472479 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
UBE2F-220ENST00000472479 KIF21BO75037 1637 aa16.98■□□□□ 0.31
UBE2F-220ENST00000472479 CHD1O14646 1710 aa16.96■□□□□ 0.31
UBE2F-220ENST00000472479 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
UBE2F-220ENST00000472479 NUP160Q12769 1436 aa16.88■□□□□ 0.29
UBE2F-220ENST00000472479 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
UBE2F-220ENST00000472479 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
UBE2F-220ENST00000472479 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
UBE2F-220ENST00000472479 TTBK1Q5TCY1 1321 aaPredicted RBP16.84■□□□□ 0.29
UBE2F-220ENST00000472479 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
UBE2F-220ENST00000472479 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
UBE2F-220ENST00000472479 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
UBE2F-220ENST00000472479 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
UBE2F-220ENST00000472479 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
UBE2F-220ENST00000472479 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
UBE2F-220ENST00000472479 CLIP1P30622 1438 aa16.74■□□□□ 0.27
UBE2F-220ENST00000472479 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
UBE2F-220ENST00000472479 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
UBE2F-220ENST00000472479 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
UBE2F-220ENST00000472479 PTPRGP23470 1445 aa16.65■□□□□ 0.26
UBE2F-220ENST00000472479 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
UBE2F-220ENST00000472479 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
UBE2F-220ENST00000472479 SHROOM2Q13796 1616 aa16.64■□□□□ 0.25
UBE2F-220ENST00000472479 ARHGAP35Q9NRY4 1499 aa16.64■□□□□ 0.25
UBE2F-220ENST00000472479 DISP1Q96F81 1524 aa16.64■□□□□ 0.25
UBE2F-220ENST00000472479 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
UBE2F-220ENST00000472479 PPP6R1Q9UPN7 881 aa16.63■□□□□ 0.25
UBE2F-220ENST00000472479 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
UBE2F-220ENST00000472479 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
UBE2F-220ENST00000472479 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
UBE2F-220ENST00000472479 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
UBE2F-220ENST00000472479 SAMD9Q5K651 1589 aa16.58■□□□□ 0.25
UBE2F-220ENST00000472479 FMN1Q68DA7 1419 aa16.57■□□□□ 0.24
UBE2F-220ENST00000472479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
UBE2F-220ENST00000472479 APLP2Q06481 763 aa16.57■□□□□ 0.24
UBE2F-220ENST00000472479 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
UBE2F-220ENST00000472479 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
UBE2F-220ENST00000472479 ADRA2BP18089 450 aa16.56■□□□□ 0.24
UBE2F-220ENST00000472479 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
UBE2F-220ENST00000472479 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
UBE2F-220ENST00000472479 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
UBE2F-220ENST00000472479 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
UBE2F-220ENST00000472479 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
UBE2F-220ENST00000472479 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
UBE2F-220ENST00000472479 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
UBE2F-220ENST00000472479 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
UBE2F-220ENST00000472479 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
UBE2F-220ENST00000472479 MSH5O43196 834 aa16.46■□□□□ 0.23
UBE2F-220ENST00000472479 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
UBE2F-220ENST00000472479 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
UBE2F-220ENST00000472479 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
UBE2F-220ENST00000472479 ABCA8O94911 1581 aa16.4■□□□□ 0.22
UBE2F-220ENST00000472479 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
UBE2F-220ENST00000472479 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
UBE2F-220ENST00000472479 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
UBE2F-220ENST00000472479 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
UBE2F-220ENST00000472479 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
UBE2F-220ENST00000472479 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
UBE2F-220ENST00000472479 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
UBE2F-220ENST00000472479 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
UBE2F-220ENST00000472479 ATP10BO94823 1461 aa16.35■□□□□ 0.21
UBE2F-220ENST00000472479 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
UBE2F-220ENST00000472479 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
UBE2F-220ENST00000472479 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
UBE2F-220ENST00000472479 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
UBE2F-220ENST00000472479 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.2
UBE2F-220ENST00000472479 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
UBE2F-220ENST00000472479 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
UBE2F-220ENST00000472479 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
UBE2F-220ENST00000472479 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
UBE2F-220ENST00000472479 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
UBE2F-220ENST00000472479 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
UBE2F-220ENST00000472479 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
UBE2F-220ENST00000472479 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
UBE2F-220ENST00000472479 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
UBE2F-220ENST00000472479 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
UBE2F-220ENST00000472479 FAM69CQ0P6D2 419 aa16.21■□□□□ 0.19
UBE2F-220ENST00000472479 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
UBE2F-220ENST00000472479 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
UBE2F-220ENST00000472479 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
UBE2F-220ENST00000472479 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
UBE2F-220ENST00000472479 MAPKBP1O60336 1514 aa16.16■□□□□ 0.18
UBE2F-220ENST00000472479 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
UBE2F-220ENST00000472479 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
UBE2F-220ENST00000472479 KIF14Q15058 1648 aa16.14■□□□□ 0.17
UBE2F-220ENST00000472479 ZNF777Q9ULD5 760 aaPredicted RBP16.13■□□□□ 0.17
UBE2F-220ENST00000472479 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
UBE2F-220ENST00000472479 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
UBE2F-220ENST00000472479 NCOA2Q15596 1464 aa16.11■□□□□ 0.17
UBE2F-220ENST00000472479 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
UBE2F-220ENST00000472479 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
UBE2F-220ENST00000472479 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
UBE2F-220ENST00000472479 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
UBE2F-220ENST00000472479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBE2F-220ENST00000472479 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
UBE2F-220ENST00000472479 DIP2BQ9P265 1576 aa16.02■□□□□ 0.16
UBE2F-220ENST00000472479 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.16
UBE2F-220ENST00000472479 PLCH2O75038 1416 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms