RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 NUP160Q12769 1436 aa25.91■■□□□ 1.74
CALD1-215ENST00000472096 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
CALD1-215ENST00000472096 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
CALD1-215ENST00000472096 IGF1RP08069 1367 aa25.82■■□□□ 1.72
CALD1-215ENST00000472096 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
CALD1-215ENST00000472096 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
CALD1-215ENST00000472096 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
CALD1-215ENST00000472096 CYB5RLQ6IPT4 315 aa25.69■■□□□ 1.7
CALD1-215ENST00000472096 CARMIL1Q5VZK9 1371 aa25.68■■□□□ 1.7
CALD1-215ENST00000472096 KIAA0586Q9BVV6 1533 aa25.6■■□□□ 1.69
CALD1-215ENST00000472096 MSH5O43196 834 aa25.58■■□□□ 1.69
CALD1-215ENST00000472096 PRG4Q92954 1404 aaPredicted RBP25.56■■□□□ 1.68
CALD1-215ENST00000472096 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
CALD1-215ENST00000472096 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
CALD1-215ENST00000472096 IQGAP2Q13576 1575 aa25.51■■□□□ 1.67
CALD1-215ENST00000472096 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
CALD1-215ENST00000472096 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
CALD1-215ENST00000472096 PPP4R3CPQ6ZMV5 832 aa25.4■■□□□ 1.66
CALD1-215ENST00000472096 EEA1Q15075 1411 aa25.38■■□□□ 1.65
CALD1-215ENST00000472096 UGGT2Q9NYU1 1516 aa25.34■■□□□ 1.65
CALD1-215ENST00000472096 CARMIL2Q6F5E8 1435 aa25.31■■□□□ 1.64
CALD1-215ENST00000472096 DISP1Q96F81 1524 aa25.3■■□□□ 1.64
CALD1-215ENST00000472096 ADCY10Q96PN6 1610 aa25.3■■□□□ 1.64
CALD1-215ENST00000472096 KIAA0556O60303 1618 aa25.29■■□□□ 1.64
CALD1-215ENST00000472096 CSRNP3Q8WYN3 585 aa25.28■■□□□ 1.64
CALD1-215ENST00000472096 KCNA4P22459 653 aa25.27■■□□□ 1.64
CALD1-215ENST00000472096 TNIKQ9UKE5 1360 aa25.23■■□□□ 1.63
CALD1-215ENST00000472096 KIF21BO75037 1637 aa25.23■■□□□ 1.63
CALD1-215ENST00000472096 PTPRGP23470 1445 aa25.2■■□□□ 1.63
CALD1-215ENST00000472096 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
CALD1-215ENST00000472096 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
CALD1-215ENST00000472096 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
CALD1-215ENST00000472096 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
CALD1-215ENST00000472096 MAPKBP1O60336 1514 aa25.14■■□□□ 1.62
CALD1-215ENST00000472096 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
CALD1-215ENST00000472096 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
CALD1-215ENST00000472096 ABCC2Q92887 1545 aa25.09■■□□□ 1.61
CALD1-215ENST00000472096 SAMD9Q5K651 1589 aa25.08■■□□□ 1.61
CALD1-215ENST00000472096 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
CALD1-215ENST00000472096 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
CALD1-215ENST00000472096 DIP2BQ9P265 1576 aa25.02■■□□□ 1.6
CALD1-215ENST00000472096 ABCA8O94911 1581 aa24.99■■□□□ 1.59
CALD1-215ENST00000472096 ABCC10Q5T3U5 1492 aa24.99■■□□□ 1.59
CALD1-215ENST00000472096 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
CALD1-215ENST00000472096 KDM5BQ9UGL1 1544 aa24.97■■□□□ 1.59
CALD1-215ENST00000472096 PLB1Q6P1J6 1458 aa24.97■■□□□ 1.59
CALD1-215ENST00000472096 EFCAB5A4FU69 1503 aa24.92■■□□□ 1.58
CALD1-215ENST00000472096 ASXL2Q76L83 1435 aa24.89■■□□□ 1.58
CALD1-215ENST00000472096 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
CALD1-215ENST00000472096 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
CALD1-215ENST00000472096 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
CALD1-215ENST00000472096 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
CALD1-215ENST00000472096 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
CALD1-215ENST00000472096 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
CALD1-215ENST00000472096 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
CALD1-215ENST00000472096 GLI2P10070 1586 aa24.83■■□□□ 1.57
CALD1-215ENST00000472096 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
CALD1-215ENST00000472096 UBTFP17480 764 aaKnown RBP24.81■■□□□ 1.56
CALD1-215ENST00000472096 WDR7Q9Y4E6 1490 aa24.78■■□□□ 1.56
CALD1-215ENST00000472096 NCBP3Q53F19 620 aaKnown RBP24.78■■□□□ 1.56
CALD1-215ENST00000472096 EPRSP07814 1512 aaKnown RBP24.77■■□□□ 1.56
CALD1-215ENST00000472096 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
CALD1-215ENST00000472096 MAP3K4Q9Y6R4 1608 aa24.75■■□□□ 1.55
CALD1-215ENST00000472096 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
CALD1-215ENST00000472096 ATP10BO94823 1461 aa24.71■■□□□ 1.55
CALD1-215ENST00000472096 NUP153P49790 1475 aaKnown RBP24.71■■□□□ 1.55
CALD1-215ENST00000472096 CFAP43Q8NDM7 1665 aa24.67■■□□□ 1.54
CALD1-215ENST00000472096 MAPK8IP2Q13387 824 aaPredicted RBP24.67■■□□□ 1.54
CALD1-215ENST00000472096 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
CALD1-215ENST00000472096 KDM6BO15054 1643 aa24.64■■□□□ 1.54
CALD1-215ENST00000472096 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
CALD1-215ENST00000472096 HECW1Q76N89 1606 aa24.61■■□□□ 1.53
CALD1-215ENST00000472096 TEX14Q8IWB6 1497 aa24.57■■□□□ 1.52
CALD1-215ENST00000472096 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
CALD1-215ENST00000472096 CNKSR2Q8WXI2 1034 aa24.55■■□□□ 1.52
CALD1-215ENST00000472096 CDK13Q14004 1512 aaKnown RBP24.55■■□□□ 1.52
CALD1-215ENST00000472096 LRRIQ1Q96JM4 1722 aa24.55■■□□□ 1.52
CALD1-215ENST00000472096 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
CALD1-215ENST00000472096 MAGI3Q5TCQ9 1506 aa24.52■■□□□ 1.52
CALD1-215ENST00000472096 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
CALD1-215ENST00000472096 CLIP1P30622 1438 aa24.51■■□□□ 1.51
CALD1-215ENST00000472096 CD109Q6YHK3 1445 aa24.51■■□□□ 1.51
CALD1-215ENST00000472096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
CALD1-215ENST00000472096 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
CALD1-215ENST00000472096 NPM3O75607 178 aaKnown RBP24.48■■□□□ 1.51
CALD1-215ENST00000472096 CASKIN1Q8WXD9 1431 aa24.42■■□□□ 1.5
CALD1-215ENST00000472096 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
CALD1-215ENST00000472096 COL17A1Q9UMD9 1497 aaPredicted RBP24.41■■□□□ 1.5
CALD1-215ENST00000472096 PLEKHD1A6NEE1 506 aa24.4■■□□□ 1.5
CALD1-215ENST00000472096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.4■■□□□ 1.5
CALD1-215ENST00000472096 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.5
CALD1-215ENST00000472096 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
CALD1-215ENST00000472096 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
CALD1-215ENST00000472096 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
CALD1-215ENST00000472096 KIF14Q15058 1648 aa24.34■■□□□ 1.49
CALD1-215ENST00000472096 CFAP74Q9C0B2 1584 aa24.33■■□□□ 1.48
CALD1-215ENST00000472096 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
CALD1-215ENST00000472096 NEO1Q92859 1461 aa24.32■■□□□ 1.48
CALD1-215ENST00000472096 ARAP3Q8WWN8 1544 aa24.31■■□□□ 1.48
CALD1-215ENST00000472096 TROQ12816 1431 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms