RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
GREB1-209ENST00000472040 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
GREB1-209ENST00000472040 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
GREB1-209ENST00000472040 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
GREB1-209ENST00000472040 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
GREB1-209ENST00000472040 EHMT2Q96KQ7 1210 aa23.65■■□□□ 1.38
GREB1-209ENST00000472040 JPH4Q96JJ6 628 aa23.61■■□□□ 1.37
GREB1-209ENST00000472040 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
GREB1-209ENST00000472040 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
GREB1-209ENST00000472040 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
GREB1-209ENST00000472040 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
GREB1-209ENST00000472040 CLIP1P30622 1438 aa23.5■■□□□ 1.35
GREB1-209ENST00000472040 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
GREB1-209ENST00000472040 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
GREB1-209ENST00000472040 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
GREB1-209ENST00000472040 DISP1Q96F81 1524 aa23.45■■□□□ 1.34
GREB1-209ENST00000472040 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
GREB1-209ENST00000472040 KIAA0556O60303 1618 aa23.41■■□□□ 1.34
GREB1-209ENST00000472040 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
GREB1-209ENST00000472040 FMN1Q68DA7 1419 aa23.33■■□□□ 1.32
GREB1-209ENST00000472040 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
GREB1-209ENST00000472040 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
GREB1-209ENST00000472040 FHOD3Q2V2M9 1422 aa23.3■■□□□ 1.32
GREB1-209ENST00000472040 PTPRGP23470 1445 aa23.29■■□□□ 1.32
GREB1-209ENST00000472040 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
GREB1-209ENST00000472040 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
GREB1-209ENST00000472040 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
GREB1-209ENST00000472040 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
GREB1-209ENST00000472040 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
GREB1-209ENST00000472040 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
GREB1-209ENST00000472040 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
GREB1-209ENST00000472040 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
GREB1-209ENST00000472040 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
GREB1-209ENST00000472040 ABCA8O94911 1581 aa23.15■■□□□ 1.3
GREB1-209ENST00000472040 UHRF1BP1LA0JNW5 1464 aa23.15■■□□□ 1.3
GREB1-209ENST00000472040 FYCO1Q9BQS8 1478 aa23.14■■□□□ 1.29
GREB1-209ENST00000472040 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
GREB1-209ENST00000472040 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
GREB1-209ENST00000472040 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
GREB1-209ENST00000472040 ABCC2Q92887 1545 aa23.08■■□□□ 1.29
GREB1-209ENST00000472040 HECW1Q76N89 1606 aa23.08■■□□□ 1.28
GREB1-209ENST00000472040 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
GREB1-209ENST00000472040 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
GREB1-209ENST00000472040 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
GREB1-209ENST00000472040 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
GREB1-209ENST00000472040 CYB5RLQ6IPT4 315 aa23.03■■□□□ 1.28
GREB1-209ENST00000472040 APLP2Q06481 763 aa23.01■■□□□ 1.27
GREB1-209ENST00000472040 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
GREB1-209ENST00000472040 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
GREB1-209ENST00000472040 ATP1B4Q9UN42 357 aaPredicted RBP22.99■■□□□ 1.27
GREB1-209ENST00000472040 ADCY10Q96PN6 1610 aa22.98■■□□□ 1.27
GREB1-209ENST00000472040 ATP10BO94823 1461 aa22.97■■□□□ 1.27
GREB1-209ENST00000472040 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
GREB1-209ENST00000472040 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
GREB1-209ENST00000472040 TIAM1Q13009 1591 aa22.92■■□□□ 1.26
GREB1-209ENST00000472040 LRRIQ1Q96JM4 1722 aa22.9■■□□□ 1.26
GREB1-209ENST00000472040 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
GREB1-209ENST00000472040 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
GREB1-209ENST00000472040 ZCCHC11Q5TAX3 1644 aaKnown RBP22.87■■□□□ 1.25
GREB1-209ENST00000472040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.87■■□□□ 1.25
GREB1-209ENST00000472040 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
GREB1-209ENST00000472040 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
GREB1-209ENST00000472040 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
GREB1-209ENST00000472040 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
GREB1-209ENST00000472040 MTUS2Q5JR59 1369 aa22.81■■□□□ 1.24
GREB1-209ENST00000472040 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
GREB1-209ENST00000472040 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
GREB1-209ENST00000472040 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
GREB1-209ENST00000472040 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
GREB1-209ENST00000472040 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
GREB1-209ENST00000472040 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
GREB1-209ENST00000472040 MAGI3Q5TCQ9 1506 aa22.75■■□□□ 1.23
GREB1-209ENST00000472040 SUPT6HQ7KZ85 1726 aaKnown RBP22.69■■□□□ 1.22
GREB1-209ENST00000472040 KIF14Q15058 1648 aa22.67■■□□□ 1.22
GREB1-209ENST00000472040 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
GREB1-209ENST00000472040 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
GREB1-209ENST00000472040 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
GREB1-209ENST00000472040 GLI2P10070 1586 aa22.63■■□□□ 1.21
GREB1-209ENST00000472040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.6■■□□□ 1.21
GREB1-209ENST00000472040 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
GREB1-209ENST00000472040 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
GREB1-209ENST00000472040 CCNB3Q8WWL7 1395 aa22.58■■□□□ 1.21
GREB1-209ENST00000472040 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
GREB1-209ENST00000472040 GPATCH8Q9UKJ3 1502 aaKnown RBP22.55■■□□□ 1.2
GREB1-209ENST00000472040 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
GREB1-209ENST00000472040 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
GREB1-209ENST00000472040 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
GREB1-209ENST00000472040 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
GREB1-209ENST00000472040 PLCH2O75038 1416 aa22.54■■□□□ 1.2
GREB1-209ENST00000472040 FAM69CQ0P6D2 419 aa22.52■■□□□ 1.2
GREB1-209ENST00000472040 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
GREB1-209ENST00000472040 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
GREB1-209ENST00000472040 CD109Q6YHK3 1445 aa22.5■■□□□ 1.19
GREB1-209ENST00000472040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
GREB1-209ENST00000472040 MYO5CQ9NQX4 1742 aa22.48■■□□□ 1.19
GREB1-209ENST00000472040 CFDP1Q9UEE9 299 aaPredicted RBP22.48■■□□□ 1.19
GREB1-209ENST00000472040 MAP3K4Q9Y6R4 1608 aa22.48■■□□□ 1.19
GREB1-209ENST00000472040 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
GREB1-209ENST00000472040 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
GREB1-209ENST00000472040 PREX2Q70Z35 1606 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms