RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
CHMP2B-204ENST00000472024 CEP170Q5SW79 1584 aa31.4■■■□□ 2.62
CHMP2B-204ENST00000472024 KIAA0586Q9BVV6 1533 aa31.39■■■□□ 2.61
CHMP2B-204ENST00000472024 CEP162Q5TB80 1403 aa31.33■■■□□ 2.61
CHMP2B-204ENST00000472024 IQGAP2Q13576 1575 aa31.31■■■□□ 2.6
CHMP2B-204ENST00000472024 FBLN2P98095 1184 aa31.31■■■□□ 2.6
CHMP2B-204ENST00000472024 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
CHMP2B-204ENST00000472024 CLIP1P30622 1438 aa31.24■■■□□ 2.59
CHMP2B-204ENST00000472024 CLASP1Q7Z460 1538 aa31.22■■■□□ 2.59
CHMP2B-204ENST00000472024 EFCAB5A4FU69 1503 aa31.21■■■□□ 2.59
CHMP2B-204ENST00000472024 SAMD9Q5K651 1589 aa31.18■■■□□ 2.58
CHMP2B-204ENST00000472024 ARHGAP35Q9NRY4 1499 aa31.16■■■□□ 2.58
CHMP2B-204ENST00000472024 SHROOM2Q13796 1616 aa31.13■■■□□ 2.57
CHMP2B-204ENST00000472024 DISP1Q96F81 1524 aa31.06■■■□□ 2.56
CHMP2B-204ENST00000472024 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
CHMP2B-204ENST00000472024 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
CHMP2B-204ENST00000472024 JPH4Q96JJ6 628 aa31.05■■■□□ 2.56
CHMP2B-204ENST00000472024 KIAA0556O60303 1618 aa31.02■■■□□ 2.56
CHMP2B-204ENST00000472024 CARMIL2Q6F5E8 1435 aa30.95■■■□□ 2.54
CHMP2B-204ENST00000472024 VPS8Q8N3P4 1428 aa30.94■■■□□ 2.54
CHMP2B-204ENST00000472024 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
CHMP2B-204ENST00000472024 FHOD3Q2V2M9 1422 aa30.92■■■□□ 2.54
CHMP2B-204ENST00000472024 PRG4Q92954 1404 aaPredicted RBP30.92■■■□□ 2.54
CHMP2B-204ENST00000472024 FMN1Q68DA7 1419 aa30.86■■■□□ 2.53
CHMP2B-204ENST00000472024 P3H3Q8IVL6 736 aa30.79■■■□□ 2.52
CHMP2B-204ENST00000472024 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
CHMP2B-204ENST00000472024 CASKIN1Q8WXD9 1431 aa30.75■■■□□ 2.51
CHMP2B-204ENST00000472024 FYCO1Q9BQS8 1478 aa30.73■■■□□ 2.51
CHMP2B-204ENST00000472024 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
CHMP2B-204ENST00000472024 PTPRGP23470 1445 aa30.67■■■□□ 2.5
CHMP2B-204ENST00000472024 ABCA8O94911 1581 aa30.65■■■□□ 2.5
CHMP2B-204ENST00000472024 MAP3K1Q13233 1512 aa30.64■■■□□ 2.5
CHMP2B-204ENST00000472024 RAPGEF6Q8TEU7 1601 aa30.62■■■□□ 2.49
CHMP2B-204ENST00000472024 ARHGEF11O15085 1522 aa30.6■■■□□ 2.49
CHMP2B-204ENST00000472024 HECW1Q76N89 1606 aa30.59■■■□□ 2.49
CHMP2B-204ENST00000472024 PLB1Q6P1J6 1458 aa30.57■■■□□ 2.48
CHMP2B-204ENST00000472024 UHRF1BP1LA0JNW5 1464 aa30.54■■■□□ 2.48
CHMP2B-204ENST00000472024 NUP153P49790 1475 aaKnown RBP30.54■■■□□ 2.48
CHMP2B-204ENST00000472024 UACAQ9BZF9 1416 aa30.54■■■□□ 2.48
CHMP2B-204ENST00000472024 CCDC18Q5T9S5 1454 aa30.52■■■□□ 2.48
CHMP2B-204ENST00000472024 CFAP43Q8NDM7 1665 aa30.51■■■□□ 2.47
CHMP2B-204ENST00000472024 ABCC2Q92887 1545 aa30.5■■■□□ 2.47
CHMP2B-204ENST00000472024 TIAM1Q13009 1591 aa30.49■■■□□ 2.47
CHMP2B-204ENST00000472024 LRRIQ1Q96JM4 1722 aa30.49■■■□□ 2.47
CHMP2B-204ENST00000472024 EPRSP07814 1512 aaKnown RBP30.48■■■□□ 2.47
CHMP2B-204ENST00000472024 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
CHMP2B-204ENST00000472024 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
CHMP2B-204ENST00000472024 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
CHMP2B-204ENST00000472024 APLP2Q06481 763 aa30.39■■■□□ 2.46
CHMP2B-204ENST00000472024 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
CHMP2B-204ENST00000472024 KDM5BQ9UGL1 1544 aa30.37■■■□□ 2.45
CHMP2B-204ENST00000472024 ADCY10Q96PN6 1610 aa30.36■■■□□ 2.45
CHMP2B-204ENST00000472024 ATP10BO94823 1461 aa30.36■■■□□ 2.45
CHMP2B-204ENST00000472024 LRRC9Q6ZRR7 1453 aa30.35■■■□□ 2.45
CHMP2B-204ENST00000472024 CDK13Q14004 1512 aaKnown RBP30.35■■■□□ 2.45
CHMP2B-204ENST00000472024 ATP1B4Q9UN42 357 aaPredicted RBP30.31■■■□□ 2.44
CHMP2B-204ENST00000472024 KANK4Q5T7N3 995 aaPredicted RBP30.28■■■□□ 2.44
CHMP2B-204ENST00000472024 EHBP1L1Q8N3D4 1523 aa30.27■■■□□ 2.44
CHMP2B-204ENST00000472024 MAGI3Q5TCQ9 1506 aa30.27■■■□□ 2.44
CHMP2B-204ENST00000472024 ZCCHC11Q5TAX3 1644 aaKnown RBP30.23■■■□□ 2.43
CHMP2B-204ENST00000472024 CDK11AQ9UQ88 783 aaPredicted RBP30.21■■■□□ 2.43
CHMP2B-204ENST00000472024 TROQ12816 1431 aaPredicted RBP30.2■■■□□ 2.42
CHMP2B-204ENST00000472024 MTUS2Q5JR59 1369 aa30.19■■■□□ 2.42
CHMP2B-204ENST00000472024 ARID3CA6NKF2 412 aa30.13■■■□□ 2.41
CHMP2B-204ENST00000472024 CYB5RLQ6IPT4 315 aa30.13■■■□□ 2.41
CHMP2B-204ENST00000472024 SUPT6HQ7KZ85 1726 aaKnown RBP30.11■■■□□ 2.41
CHMP2B-204ENST00000472024 PLEKHD1A6NEE1 506 aa30.09■■■□□ 2.41
CHMP2B-204ENST00000472024 NCOA2Q15596 1464 aa30.07■■■□□ 2.4
CHMP2B-204ENST00000472024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.07■■■□□ 2.4
CHMP2B-204ENST00000472024 HNRNPUL2Q1KMD3 747 aaKnown RBP30.07■■■□□ 2.4
CHMP2B-204ENST00000472024 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
CHMP2B-204ENST00000472024 MAPKBP1O60336 1514 aa30.05■■■□□ 2.4
CHMP2B-204ENST00000472024 WDR7Q9Y4E6 1490 aa30.04■■■□□ 2.4
CHMP2B-204ENST00000472024 KIF14Q15058 1648 aa30.02■■■□□ 2.4
CHMP2B-204ENST00000472024 NPM1P06748 294 aaKnown RBP eCLIP30.01■■■□□ 2.39
CHMP2B-204ENST00000472024 ABCC10Q5T3U5 1492 aa30■■■□□ 2.39
CHMP2B-204ENST00000472024 ASXL2Q76L83 1435 aa30■■■□□ 2.39
CHMP2B-204ENST00000472024 PHLDB1Q86UU1 1377 aa30■■■□□ 2.39
CHMP2B-204ENST00000472024 RRBP1Q9P2E9 1410 aaKnown RBP29.96■■■□□ 2.39
CHMP2B-204ENST00000472024 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
CHMP2B-204ENST00000472024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
CHMP2B-204ENST00000472024 MIA2Q96PC5 1412 aa29.88■■■□□ 2.37
CHMP2B-204ENST00000472024 GPATCH8Q9UKJ3 1502 aaKnown RBP29.87■■■□□ 2.37
CHMP2B-204ENST00000472024 TRIM26Q12899 539 aaPredicted RBP29.87■■■□□ 2.37
CHMP2B-204ENST00000472024 FGD6Q6ZV73 1430 aa29.87■■■□□ 2.37
CHMP2B-204ENST00000472024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.86■■■□□ 2.37
CHMP2B-204ENST00000472024 TTC37Q6PGP7 1564 aa29.86■■■□□ 2.37
CHMP2B-204ENST00000472024 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
CHMP2B-204ENST00000472024 CCNB3Q8WWL7 1395 aa29.85■■■□□ 2.37
CHMP2B-204ENST00000472024 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
CHMP2B-204ENST00000472024 ARAP3Q8WWN8 1544 aa29.82■■■□□ 2.36
CHMP2B-204ENST00000472024 CDC42BPAQ5VT25 1732 aa29.82■■■□□ 2.36
CHMP2B-204ENST00000472024 GLI2P10070 1586 aa29.81■■■□□ 2.36
CHMP2B-204ENST00000472024 TCOF1Q13428 1488 aaKnown RBP29.8■■■□□ 2.36
CHMP2B-204ENST00000472024 PREX2Q70Z35 1606 aa29.8■■■□□ 2.36
CHMP2B-204ENST00000472024 PLCH2O75038 1416 aa29.75■■■□□ 2.35
CHMP2B-204ENST00000472024 KCNH8Q96L42 1107 aa29.75■■■□□ 2.35
CHMP2B-204ENST00000472024 MYO5CQ9NQX4 1742 aa29.75■■■□□ 2.35
CHMP2B-204ENST00000472024 PTPN23Q9H3S7 1636 aa29.74■■■□□ 2.35
CHMP2B-204ENST00000472024 DIP2BQ9P265 1576 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms