RNA–Protein interactions for RNA: ENST00000471772.6

RPS27A-207, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-207ENST00000471772 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
RPS27A-207ENST00000471772 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
RPS27A-207ENST00000471772 PRXQ9BXM0 1461 aa13.24□□□□□ -0.29
RPS27A-207ENST00000471772 FAM9AQ8IZU1 332 aaPredicted RBP13.22□□□□□ -0.29
RPS27A-207ENST00000471772 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
RPS27A-207ENST00000471772 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
RPS27A-207ENST00000471772 PRG4Q92954 1404 aaPredicted RBP13.18□□□□□ -0.3
RPS27A-207ENST00000471772 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
RPS27A-207ENST00000471772 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
RPS27A-207ENST00000471772 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
RPS27A-207ENST00000471772 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
RPS27A-207ENST00000471772 KIF21BO75037 1637 aa13.1□□□□□ -0.31
RPS27A-207ENST00000471772 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
RPS27A-207ENST00000471772 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
RPS27A-207ENST00000471772 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
RPS27A-207ENST00000471772 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
RPS27A-207ENST00000471772 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
RPS27A-207ENST00000471772 PTPRGP23470 1445 aa13.06□□□□□ -0.32
RPS27A-207ENST00000471772 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
RPS27A-207ENST00000471772 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
RPS27A-207ENST00000471772 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
RPS27A-207ENST00000471772 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
RPS27A-207ENST00000471772 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
RPS27A-207ENST00000471772 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
RPS27A-207ENST00000471772 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
RPS27A-207ENST00000471772 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
RPS27A-207ENST00000471772 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
RPS27A-207ENST00000471772 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
RPS27A-207ENST00000471772 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
RPS27A-207ENST00000471772 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
RPS27A-207ENST00000471772 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
RPS27A-207ENST00000471772 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
RPS27A-207ENST00000471772 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
RPS27A-207ENST00000471772 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
RPS27A-207ENST00000471772 ABCA8O94911 1581 aa12.87□□□□□ -0.35
RPS27A-207ENST00000471772 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
RPS27A-207ENST00000471772 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
RPS27A-207ENST00000471772 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
RPS27A-207ENST00000471772 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
RPS27A-207ENST00000471772 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
RPS27A-207ENST00000471772 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
RPS27A-207ENST00000471772 CLIP1P30622 1438 aa12.82□□□□□ -0.36
RPS27A-207ENST00000471772 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
RPS27A-207ENST00000471772 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
RPS27A-207ENST00000471772 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
RPS27A-207ENST00000471772 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
RPS27A-207ENST00000471772 ATP10BO94823 1461 aa12.8□□□□□ -0.36
RPS27A-207ENST00000471772 ZCCHC11Q5TAX3 1644 aaKnown RBP12.79□□□□□ -0.36
RPS27A-207ENST00000471772 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
RPS27A-207ENST00000471772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
RPS27A-207ENST00000471772 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
RPS27A-207ENST00000471772 NUP153P49790 1475 aaKnown RBP12.77□□□□□ -0.37
RPS27A-207ENST00000471772 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
RPS27A-207ENST00000471772 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
RPS27A-207ENST00000471772 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
RPS27A-207ENST00000471772 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
RPS27A-207ENST00000471772 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
RPS27A-207ENST00000471772 WDR7Q9Y4E6 1490 aa12.74□□□□□ -0.37
RPS27A-207ENST00000471772 CDK11AQ9UQ88 783 aaPredicted RBP12.74□□□□□ -0.37
RPS27A-207ENST00000471772 GLI2P10070 1586 aa12.73□□□□□ -0.37
RPS27A-207ENST00000471772 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
RPS27A-207ENST00000471772 CASKIN1Q8WXD9 1431 aa12.73□□□□□ -0.37
RPS27A-207ENST00000471772 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
RPS27A-207ENST00000471772 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
RPS27A-207ENST00000471772 FYCO1Q9BQS8 1478 aa12.67□□□□□ -0.38
RPS27A-207ENST00000471772 TSPOAP1O95153 1857 aa12.66□□□□□ -0.38
RPS27A-207ENST00000471772 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
RPS27A-207ENST00000471772 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
RPS27A-207ENST00000471772 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
RPS27A-207ENST00000471772 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
RPS27A-207ENST00000471772 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
RPS27A-207ENST00000471772 CFAP43Q8NDM7 1665 aa12.64□□□□□ -0.39
RPS27A-207ENST00000471772 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
RPS27A-207ENST00000471772 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
RPS27A-207ENST00000471772 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
RPS27A-207ENST00000471772 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
RPS27A-207ENST00000471772 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
RPS27A-207ENST00000471772 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
RPS27A-207ENST00000471772 PHLDB1Q86UU1 1377 aa12.6□□□□□ -0.39
RPS27A-207ENST00000471772 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
RPS27A-207ENST00000471772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.41e-13■■■■□ 26.2
RPS27A-207ENST00000471772 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
RPS27A-207ENST00000471772 PLCH2O75038 1416 aa12.55□□□□□ -0.4
RPS27A-207ENST00000471772 APLP2Q06481 763 aa12.55□□□□□ -0.4
RPS27A-207ENST00000471772 EFCAB2Q5VUJ9 269 aa12.55□□□□□ -0.4
RPS27A-207ENST00000471772 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
RPS27A-207ENST00000471772 NEO1Q92859 1461 aa12.53□□□□□ -0.4
RPS27A-207ENST00000471772 KIF14Q15058 1648 aa12.53□□□□□ -0.4
RPS27A-207ENST00000471772 ARAP3Q8WWN8 1544 aa12.52□□□□□ -0.4
RPS27A-207ENST00000471772 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
RPS27A-207ENST00000471772 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.41
RPS27A-207ENST00000471772 KDM6BO15054 1643 aa12.51□□□□□ -0.41
RPS27A-207ENST00000471772 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
RPS27A-207ENST00000471772 FANCAO15360 1455 aa12.5□□□□□ -0.41
RPS27A-207ENST00000471772 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
RPS27A-207ENST00000471772 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
RPS27A-207ENST00000471772 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
RPS27A-207ENST00000471772 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
RPS27A-207ENST00000471772 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
RPS27A-207ENST00000471772 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms